Protein–RNA interactions for Protein: P55285

CDH6, Cadherin-6, humanhuman

Predictions only

Length 790 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH6P55285 MDM2-203ENST00000299252 966 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
CDH6P55285 AL121972.1-201ENST00000402023 252 ntBASIC3.38□□□□□ -1.87
CDH6P55285 SFR1P1-201ENST00000403720 688 ntBASIC3.38□□□□□ -1.87
CDH6P55285 MTND3P20-201ENST00000407663 186 ntBASIC3.38□□□□□ -1.87
CDH6P55285 HMGN1P24-201ENST00000412282 298 ntBASIC3.38□□□□□ -1.87
CDH6P55285 RPS20P25-201ENST00000412447 352 ntBASIC3.38□□□□□ -1.87
CDH6P55285 AL731575.1-201ENST00000413564 418 ntTSL 2 BASIC3.38□□□□□ -1.87
CDH6P55285 AL158825.1-201ENST00000414735 521 ntBASIC3.38□□□□□ -1.87
CDH6P55285 RPS3AP9-201ENST00000417027 792 ntBASIC3.38□□□□□ -1.87
CDH6P55285 AC245291.1-201ENST00000419501 328 ntBASIC3.38□□□□□ -1.87
CDH6P55285 LINC02526-201ENST00000424162 419 ntTSL 2 BASIC3.38□□□□□ -1.87
CDH6P55285 AC017002.2-201ENST00000426124 792 ntTSL 2 BASIC3.38□□□□□ -1.87
CDH6P55285 RSL24D1P8-201ENST00000434442 492 ntBASIC3.38□□□□□ -1.87
CDH6P55285 AL445259.1-202ENST00000434768 379 ntTSL 3 BASIC3.38□□□□□ -1.87
CDH6P55285 C1orf143-201ENST00000443836 762 ntTSL 2 BASIC3.38□□□□□ -1.87
CDH6P55285 ZNF736P6Y-201ENST00000447526 1213 ntBASIC3.38□□□□□ -1.87
CDH6P55285 AL138737.1-201ENST00000456896 1252 ntTSL 5 BASIC3.38□□□□□ -1.87
CDH6P55285 AC008155.2-201ENST00000464337 397 ntBASIC3.38□□□□□ -1.87
CDH6P55285 SYPL1P1-201ENST00000473622 768 ntBASIC3.38□□□□□ -1.87
CDH6P55285 RPL23AP55-201ENST00000498163 452 ntBASIC3.38□□□□□ -1.87
CDH6P55285 MSMO1-203ENST00000504317 1026 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
CDH6P55285 SCARNA20.6-201ENST00000517251 106 ntBASIC3.38□□□□□ -1.87
CDH6P55285 CASP1-212ENST00000531166 300 ntTSL 5 BASIC3.38□□□□□ -1.87
CDH6P55285 AP000619.3-201ENST00000535634 1127 ntBASIC3.38□□□□□ -1.87
CDH6P55285 OR4T1P-201ENST00000554933 911 ntBASIC3.38□□□□□ -1.87
CDH6P55285 AC021739.4-201ENST00000561417 569 ntTSL 4 BASIC3.38□□□□□ -1.87
CDH6P55285 ITFG1-AS1-202ENST00000565694 494 ntTSL 2 BASIC3.38□□□□□ -1.87
CDH6P55285 AC091132.5-202ENST00000587078 501 ntTSL 3 BASIC3.38□□□□□ -1.87
CDH6P55285 AL157938.2-203ENST00000589540 931 ntTSL 5 BASIC3.38□□□□□ -1.87
CDH6P55285 AC073657.2-201ENST00000605661 303 ntBASIC3.38□□□□□ -1.87
CDH6P55285 AC016877.3-201ENST00000606778 504 ntBASIC3.38□□□□□ -1.87
CDH6P55285 AC006023.2-201ENST00000609916 167 ntBASIC3.38□□□□□ -1.87
CDH6P55285 AC096586.1-201ENST00000610267 561 ntBASIC3.38□□□□□ -1.87
CDH6P55285 AL157817.1-201ENST00000614264 790 ntBASIC3.38□□□□□ -1.87
CDH6P55285 AC091903.1-201ENST00000624322 454 ntBASIC3.38□□□□□ -1.87
CDH6P55285 AC010976.1-210ENST00000630740 1005 ntTSL 5 BASIC3.38□□□□□ -1.87
CDH6P55285 AC068620.4-201ENST00000636730 1182 ntBASIC3.38□□□□□ -1.87
CDH6P55285 ADAM5-201ENST00000359790 1663 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
CDH6P55285 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
CDH6P55285 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC3.38□□□□□ -1.87
CDH6P55285 OXR1-207ENST00000497705 2007 ntTSL 2 BASIC3.37□□□□□ -1.87
CDH6P55285 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
CDH6P55285 LRRC49-222ENST00000560158 1898 ntTSL 5 BASIC3.37□□□□□ -1.87
CDH6P55285 AC116096.1-201ENST00000566804 2314 ntBASIC3.37□□□□□ -1.87
CDH6P55285 AC118273.1-201ENST00000525324 3006 ntBASIC3.37□□□□□ -1.87
CDH6P55285 MYOT-202ENST00000421631 1474 ntTSL 2 BASIC3.37□□□□□ -1.87
CDH6P55285 ARPP19-211ENST00000568196 1489 ntTSL 2 BASIC3.37□□□□□ -1.87
CDH6P55285 OR5T1-202ENST00000641665 1471 ntAPPRIS P1 BASIC3.37□□□□□ -1.87
CDH6P55285 SNORD56.3-201ENST00000363507 71 ntBASIC3.37□□□□□ -1.87
CDH6P55285 ATF1P1-201ENST00000406040 927 ntBASIC3.37□□□□□ -1.87
CDH6P55285 UBE2V1P15-201ENST00000407776 448 ntBASIC3.37□□□□□ -1.87
CDH6P55285 AC097713.2-201ENST00000430199 356 ntBASIC3.37□□□□□ -1.87
CDH6P55285 AL590103.1-201ENST00000434488 307 ntBASIC3.37□□□□□ -1.87
CDH6P55285 Z83839.2-201ENST00000436294 274 ntTSL 5 BASIC3.37□□□□□ -1.87
CDH6P55285 HMGB1P12-201ENST00000438594 598 ntBASIC3.37□□□□□ -1.87
CDH6P55285 LINC01309-201ENST00000444795 492 ntTSL 3 BASIC3.37□□□□□ -1.87
CDH6P55285 AC010468.1-201ENST00000461022 817 ntBASIC3.37□□□□□ -1.87
CDH6P55285 VN1R17P-201ENST00000472048 1090 ntBASIC3.37□□□□□ -1.87
CDH6P55285 AC004884.2-201ENST00000476569 546 ntTSL 4 BASIC3.37□□□□□ -1.87
CDH6P55285 RPS27P23-201ENST00000487608 251 ntBASIC3.37□□□□□ -1.87
CDH6P55285 AC010265.1-201ENST00000513509 211 ntBASIC3.37□□□□□ -1.87
CDH6P55285 RNU1-143P-201ENST00000516296 146 ntBASIC3.37□□□□□ -1.87
CDH6P55285 AC102945.1-201ENST00000522640 407 ntTSL 2 BASIC3.37□□□□□ -1.87
CDH6P55285 VNN2-207ENST00000525289 900 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
CDH6P55285 HIGD1AP1-201ENST00000550979 275 ntBASIC3.37□□□□□ -1.87
CDH6P55285 CR383656.14-201ENST00000551951 406 ntBASIC3.37□□□□□ -1.87
CDH6P55285 AC107954.1-201ENST00000565906 727 ntBASIC3.37□□□□□ -1.87
CDH6P55285 AC087463.4-202ENST00000566676 579 ntTSL 3 BASIC3.37□□□□□ -1.87
CDH6P55285 INTS6-AS1-210ENST00000595424 301 ntTSL 5 BASIC3.37□□□□□ -1.87
CDH6P55285 AC092364.1-201ENST00000598561 471 ntTSL 3 BASIC3.37□□□□□ -1.87
CDH6P55285 ESRRAP2-204ENST00000606337 280 ntTSL 5 BASIC3.37□□□□□ -1.87
CDH6P55285 U1.23-201ENST00000610293 146 ntBASIC3.37□□□□□ -1.87
CDH6P55285 RNU1-68P-201ENST00000615382 146 ntBASIC3.37□□□□□ -1.87
CDH6P55285 ZFAT-AS1_1.1-201ENST00000620907 79 ntBASIC3.37□□□□□ -1.87
CDH6P55285 U1.39-201ENST00000621562 146 ntBASIC3.37□□□□□ -1.87
CDH6P55285 CASC15-208ENST00000636388 1174 ntTSL 5 BASIC3.37□□□□□ -1.87
CDH6P55285 AC087521.4-201ENST00000637427 289 ntTSL 5 BASIC3.37□□□□□ -1.87
CDH6P55285 AC011139.1-202ENST00000637744 563 ntTSL 5 BASIC3.37□□□□□ -1.87
CDH6P55285 NT5C3A-203ENST00000396152 1788 ntAPPRIS P3 TSL 1 (best) BASIC3.37□□□□□ -1.87
CDH6P55285 OFD1P5Y-201ENST00000447585 2590 ntBASIC3.37□□□□□ -1.87
CDH6P55285 GABRG2-208ENST00000638552 3710 ntTSL 5 BASIC3.36□□□□□ -1.87
CDH6P55285 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
CDH6P55285 BCLAF1P1-201ENST00000505813 2752 ntBASIC3.36□□□□□ -1.87
CDH6P55285 DAZ4-201ENST00000382296 2048 ntAPPRIS P5 TSL 5 BASIC3.36□□□□□ -1.87
CDH6P55285 CYYR1-AS1-201ENST00000357401 3412 ntTSL 2 BASIC3.36□□□□□ -1.87
CDH6P55285 MT-ND5-201ENST00000361567 1812 ntAPPRIS P1 BASIC3.36□□□□□ -1.87
CDH6P55285 IL21-201ENST00000264497 629 ntAPPRIS P3 TSL 1 (best) BASIC3.36□□□□□ -1.87
CDH6P55285 SNORA71.3-201ENST00000362582 128 ntBASIC3.36□□□□□ -1.87
CDH6P55285 RNA5SP383-201ENST00000362934 120 ntBASIC3.36□□□□□ -1.87
CDH6P55285 MIR525-201ENST00000384978 85 ntBASIC3.36□□□□□ -1.87
CDH6P55285 MIR670-201ENST00000390142 98 ntBASIC3.36□□□□□ -1.87
CDH6P55285 MS4A4E-202ENST00000398986 522 ntAPPRIS P1 TSL 5 BASIC3.36□□□□□ -1.87
CDH6P55285 SSXP10-201ENST00000402595 565 ntBASIC3.36□□□□□ -1.87
CDH6P55285 AC063979.1-201ENST00000415539 377 ntBASIC3.36□□□□□ -1.87
CDH6P55285 AC008280.1-201ENST00000418851 412 ntBASIC3.36□□□□□ -1.87
CDH6P55285 DPYD-AS2-201ENST00000422259 788 ntTSL 3 BASIC3.36□□□□□ -1.87
CDH6P55285 RPF2P1-201ENST00000424137 906 ntBASIC3.36□□□□□ -1.87
CDH6P55285 BX890604.2-201ENST00000427883 474 ntBASIC3.36□□□□□ -1.87
CDH6P55285 VDAC1P3-201ENST00000434069 851 ntBASIC3.36□□□□□ -1.87
CDH6P55285 AC064874.1-202ENST00000440101 287 ntTSL 3 BASIC3.36□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 137.5 ms