Protein–RNA interactions for Protein: P39059

COL15A1, Collagen alpha-1(XV) chain, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL15A1P39059 DBF4P1-201ENST00000412976 1892 ntBASIC4.87□□□□□ -1.63
COL15A1P39059 AP000526.1-201ENST00000603308 1388 ntBASIC4.87□□□□□ -1.63
COL15A1P39059 LINC00971-202ENST00000484892 7308 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
COL15A1P39059 UBE3A-202ENST00000397954 2873 ntTSL 5 BASIC4.86□□□□□ -1.63
COL15A1P39059 AL049781.1-201ENST00000623195 3585 ntBASIC4.86□□□□□ -1.63
COL15A1P39059 AC134882.1-201ENST00000603738 1676 ntBASIC4.86□□□□□ -1.63
COL15A1P39059 TAF7L-201ENST00000324762 2107 ntAPPRIS ALT2 TSL 2 BASIC4.86□□□□□ -1.63
COL15A1P39059 CNKSR2-202ENST00000379510 5315 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
COL15A1P39059 LINC01733-201ENST00000449316 4604 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
COL15A1P39059 ZNF700-202ENST00000482090 3113 ntAPPRIS ALT2 TSL 2 BASIC4.86□□□□□ -1.63
COL15A1P39059 AC068254.2-201ENST00000623938 3577 ntBASIC4.86□□□□□ -1.63
COL15A1P39059 ALG14-201ENST00000370205 9367 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
COL15A1P39059 AL451142.2-201ENST00000429076 2090 ntBASIC4.86□□□□□ -1.63
COL15A1P39059 AC021355.1-202ENST00000519996 1633 ntTSL 2 BASIC4.86□□□□□ -1.63
COL15A1P39059 CYP3A7-CYP3A51P-201ENST00000611620 1608 ntTSL 5 BASIC4.86□□□□□ -1.63
COL15A1P39059 FMNL2-202ENST00000475377 3648 ntTSL 5 BASIC4.86□□□□□ -1.63
COL15A1P39059 AC087359.1-201ENST00000508335 1740 ntBASIC4.86□□□□□ -1.63
COL15A1P39059 OR5J2-201ENST00000312298 939 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
COL15A1P39059 RNU6-582P-201ENST00000362989 107 ntBASIC4.86□□□□□ -1.63
COL15A1P39059 DFNB59-201ENST00000375129 1202 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
COL15A1P39059 SNORD116-9-201ENST00000384000 95 ntBASIC4.86□□□□□ -1.63
COL15A1P39059 SNORD116-3-201ENST00000384287 95 ntBASIC4.86□□□□□ -1.63
COL15A1P39059 SNORD116-7-201ENST00000384404 95 ntBASIC4.86□□□□□ -1.63
COL15A1P39059 SNORD116-5-201ENST00000384462 95 ntBASIC4.86□□□□□ -1.63
COL15A1P39059 RBMS3-AS1-201ENST00000414547 554 ntTSL 4 BASIC4.86□□□□□ -1.63
COL15A1P39059 AC016907.1-201ENST00000419483 435 ntBASIC4.86□□□□□ -1.63
COL15A1P39059 LINC01674-201ENST00000427446 504 ntTSL 3 BASIC4.86□□□□□ -1.63
COL15A1P39059 DIAPH2-AS1-201ENST00000439759 971 ntTSL 3 BASIC4.86□□□□□ -1.63
COL15A1P39059 AL353613.1-201ENST00000443163 530 ntTSL 3 BASIC4.86□□□□□ -1.63
COL15A1P39059 MTCYBP3-201ENST00000445588 1137 ntBASIC4.86□□□□□ -1.63
COL15A1P39059 MTND1P29-201ENST00000448112 647 ntBASIC4.86□□□□□ -1.63
COL15A1P39059 RPS3AP46-201ENST00000448352 682 ntBASIC4.86□□□□□ -1.63
COL15A1P39059 AC239809.1-201ENST00000450470 217 ntBASIC4.86□□□□□ -1.63
COL15A1P39059 SCEL-AS1-201ENST00000456280 493 ntTSL 3 BASIC4.86□□□□□ -1.63
COL15A1P39059 UBDP1-202ENST00000457888 382 ntBASIC4.86□□□□□ -1.63
COL15A1P39059 RPL31P3-201ENST00000458430 332 ntBASIC4.86□□□□□ -1.63
COL15A1P39059 DCUN1D1-204ENST00000469954 970 ntTSL 3 BASIC4.86□□□□□ -1.63
COL15A1P39059 LINC00971-203ENST00000491849 452 ntTSL 3 BASIC4.86□□□□□ -1.63
COL15A1P39059 AL358832.1-201ENST00000497800 389 ntBASIC4.86□□□□□ -1.63
COL15A1P39059 AC008494.2-201ENST00000514544 370 ntBASIC4.86□□□□□ -1.63
COL15A1P39059 AC106744.2-202ENST00000515123 448 ntTSL 3 BASIC4.86□□□□□ -1.63
COL15A1P39059 TET2-AS1-201ENST00000515414 537 ntTSL 5 BASIC4.86□□□□□ -1.63
COL15A1P39059 AC108515.1-201ENST00000517407 525 ntTSL 3 BASIC4.86□□□□□ -1.63
COL15A1P39059 AC079209.2-201ENST00000519107 431 ntTSL 3 BASIC4.86□□□□□ -1.63
COL15A1P39059 AC107909.2-201ENST00000520844 493 ntTSL 3 BASIC4.86□□□□□ -1.63
COL15A1P39059 AF279873.1-201ENST00000523393 313 ntBASIC4.86□□□□□ -1.63
COL15A1P39059 DEFB109D-201ENST00000529497 240 ntBASIC4.86□□□□□ -1.63
COL15A1P39059 AC027287.2-201ENST00000547559 592 ntTSL 4 BASIC4.86□□□□□ -1.63
COL15A1P39059 GNRHR2P1-201ENST00000555315 631 ntBASIC4.86□□□□□ -1.63
COL15A1P39059 AL583810.3-201ENST00000555713 584 ntTSL 4 BASIC4.86□□□□□ -1.63
COL15A1P39059 AC018552.3-201ENST00000567416 561 ntBASIC4.86□□□□□ -1.63
COL15A1P39059 AC005332.6-201ENST00000613178 446 ntBASIC4.86□□□□□ -1.63
COL15A1P39059 AC092140.2-201ENST00000618027 521 ntBASIC4.86□□□□□ -1.63
COL15A1P39059 AC018816.2-201ENST00000621460 353 ntBASIC4.86□□□□□ -1.63
COL15A1P39059 AF246928.1-201ENST00000623768 87 ntBASIC4.86□□□□□ -1.63
COL15A1P39059 MTND5P1-201ENST00000445440 1375 ntBASIC4.86□□□□□ -1.63
COL15A1P39059 AL445523.1-201ENST00000451184 1362 ntBASIC4.86□□□□□ -1.63
COL15A1P39059 OR10D3-202ENST00000641351 3561 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
COL15A1P39059 OR10D3-203ENST00000641546 3566 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
COL15A1P39059 EMB-205ENST00000514111 1475 ntAPPRIS ALT2 TSL 2 BASIC4.86□□□□□ -1.63
COL15A1P39059 OR10J1-203ENST00000642080 3503 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
COL15A1P39059 PNPLA8-204ENST00000426128 4268 ntTSL 5 BASIC4.85□□□□□ -1.63
COL15A1P39059 XIRP2-207ENST00000628543 12182 ntTSL 5 BASIC4.85□□□□□ -1.63
COL15A1P39059 AC011155.1-201ENST00000316512 456 ntBASIC4.85□□□□□ -1.63
COL15A1P39059 RNU6-492P-201ENST00000363035 104 ntBASIC4.85□□□□□ -1.63
COL15A1P39059 TMCO2-201ENST00000372766 739 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
COL15A1P39059 RNU6-1200P-201ENST00000384162 107 ntBASIC4.85□□□□□ -1.63
COL15A1P39059 RNU6-253P-201ENST00000384730 105 ntBASIC4.85□□□□□ -1.63
COL15A1P39059 RPL7P60-201ENST00000397636 735 ntBASIC4.85□□□□□ -1.63
COL15A1P39059 UBE2Q2P12-201ENST00000414573 204 ntBASIC4.85□□□□□ -1.63
COL15A1P39059 AC092155.1-202ENST00000416111 932 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
COL15A1P39059 AC009299.3-201ENST00000421122 1072 ntTSL 3 BASIC4.85□□□□□ -1.63
COL15A1P39059 AL022400.1-201ENST00000423946 935 ntBASIC4.85□□□□□ -1.63
COL15A1P39059 AL139230.1-201ENST00000440094 425 ntTSL 3 BASIC4.85□□□□□ -1.63
COL15A1P39059 AL157359.2-201ENST00000440372 784 ntTSL 3 BASIC4.85□□□□□ -1.63
COL15A1P39059 AL050303.1-201ENST00000444356 458 ntTSL 2 BASIC4.85□□□□□ -1.63
COL15A1P39059 MTND2P4-201ENST00000445034 1004 ntBASIC4.85□□□□□ -1.63
COL15A1P39059 AC009299.3-202ENST00000445372 538 ntTSL 3 BASIC4.85□□□□□ -1.63
COL15A1P39059 AC006511.1-201ENST00000470614 315 ntBASIC4.85□□□□□ -1.63
COL15A1P39059 AC117532.1-201ENST00000514638 323 ntBASIC4.85□□□□□ -1.63
COL15A1P39059 AC092436.2-201ENST00000515188 411 ntTSL 2 BASIC4.85□□□□□ -1.63
COL15A1P39059 HNRNPKP5-201ENST00000515300 253 ntBASIC4.85□□□□□ -1.63
COL15A1P39059 AC087672.2-201ENST00000522498 429 ntTSL 2 BASIC4.85□□□□□ -1.63
COL15A1P39059 AP002428.1-201ENST00000527345 380 ntTSL 3 BASIC4.85□□□□□ -1.63
COL15A1P39059 AC118942.1-202ENST00000529081 578 ntTSL 5 BASIC4.85□□□□□ -1.63
COL15A1P39059 OR4A12P-201ENST00000530847 918 ntBASIC4.85□□□□□ -1.63
COL15A1P39059 AC135628.1-201ENST00000568867 534 ntBASIC4.85□□□□□ -1.63
COL15A1P39059 FP475955.2-201ENST00000623720 458 ntTSL 2 BASIC4.85□□□□□ -1.63
COL15A1P39059 AC074029.4-201ENST00000624796 1859 ntBASIC4.85□□□□□ -1.63
COL15A1P39059 TUG1-201ENST00000519077 5673 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
COL15A1P39059 TCP11X1-203ENST00000623912 1715 ntTSL 5 BASIC4.85□□□□□ -1.63
COL15A1P39059 PLCB4-204ENST00000378501 5833 ntAPPRIS P4 TSL 5 BASIC4.84□□□□□ -1.63
COL15A1P39059 STEAP2-203ENST00000394622 6612 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
COL15A1P39059 RXFP1-205ENST00000448688 3861 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
COL15A1P39059 TUBD1-214ENST00000592426 1460 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
COL15A1P39059 ELF2-203ENST00000379550 3278 ntTSL 5 BASIC4.84□□□□□ -1.63
COL15A1P39059 RNU6-553P-201ENST00000364047 96 ntBASIC4.84□□□□□ -1.63
COL15A1P39059 RHOT1P2-201ENST00000366423 333 ntBASIC4.84□□□□□ -1.63
COL15A1P39059 RNU6-1151P-201ENST00000384684 107 ntBASIC4.84□□□□□ -1.63
COL15A1P39059 SOD2P1-201ENST00000396543 562 ntBASIC4.84□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 85.3 ms