Protein–RNA interactions for Protein: P37840

SNCA, Alpha-synuclein, humanhuman

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAP37840 TCF7L1-IT1-201ENST00000433581 458 ntTSL 3 BASIC2.28□□□□□ -2.04
SNCAP37840 RPL23AP74-201ENST00000437246 471 ntBASIC2.28□□□□□ -2.04
SNCAP37840 AL020998.1-201ENST00000444923 229 ntTSL 3 BASIC2.28□□□□□ -2.04
SNCAP37840 AC009495.2-201ENST00000457108 506 ntTSL 2 BASIC2.28□□□□□ -2.04
SNCAP37840 MIR1302-2HG-201ENST00000469289 535 ntTSL 5 BASIC2.28□□□□□ -2.04
SNCAP37840 TRBV8-1-201ENST00000481590 279 ntBASIC2.28□□□□□ -2.04
SNCAP37840 AC139718.1-201ENST00000508010 300 ntTSL 5 BASIC2.28□□□□□ -2.04
SNCAP37840 AF279873.4-202ENST00000521714 511 ntTSL 2 BASIC2.28□□□□□ -2.04
SNCAP37840 PSMA2P1-201ENST00000526365 646 ntBASIC2.28□□□□□ -2.04
SNCAP37840 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC2.28□□□□□ -2.04
SNCAP37840 AC023796.1-201ENST00000536131 670 ntTSL 3 BASIC2.28□□□□□ -2.04
SNCAP37840 AADACP1-206ENST00000561502 1193 ntBASIC2.28□□□□□ -2.04
SNCAP37840 AC036103.1-201ENST00000563846 823 ntTSL 5 BASIC2.28□□□□□ -2.04
SNCAP37840 MIR5004-201ENST00000579078 107 ntBASIC2.28□□□□□ -2.04
SNCAP37840 AL683887.1-201ENST00000603401 287 ntTSL 3 BASIC2.28□□□□□ -2.04
SNCAP37840 BX664608.1-201ENST00000610519 487 ntBASIC2.28□□□□□ -2.04
SNCAP37840 AC084757.4-201ENST00000616350 526 ntBASIC2.28□□□□□ -2.04
SNCAP37840 AC006111.3-201ENST00000622137 383 ntBASIC2.28□□□□□ -2.04
SNCAP37840 AC016542.2-201ENST00000624201 619 ntBASIC2.28□□□□□ -2.04
SNCAP37840 ABBA01000935.2-201ENST00000637477 838 ntBASIC2.28□□□□□ -2.04
SNCAP37840 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC2.28□□□□□ -2.04
SNCAP37840 ZNF271P-202ENST00000465539 1970 ntBASIC2.28□□□□□ -2.04
SNCAP37840 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC2.28□□□□□ -2.04
SNCAP37840 AC009501.3-201ENST00000605001 1352 ntBASIC2.27□□□□□ -2.05
SNCAP37840 OR51F1-201ENST00000380383 960 ntAPPRIS P5 BASIC2.27□□□□□ -2.05
SNCAP37840 ATP5F1P3-201ENST00000397213 657 ntBASIC2.27□□□□□ -2.05
SNCAP37840 AL356967.1-201ENST00000406305 431 ntBASIC2.27□□□□□ -2.05
SNCAP37840 RNA5SP181-201ENST00000410246 98 ntBASIC2.27□□□□□ -2.05
SNCAP37840 RPL7P8-201ENST00000411964 730 ntBASIC2.27□□□□□ -2.05
SNCAP37840 AL078590.1-201ENST00000412602 479 ntTSL 3 BASIC2.27□□□□□ -2.05
SNCAP37840 NIPA2P1-201ENST00000426223 976 ntBASIC2.27□□□□□ -2.05
SNCAP37840 PRKG1-AS1-202ENST00000426785 1111 ntTSL 1 (best) BASIC2.27□□□□□ -2.05
SNCAP37840 AC005160.1-201ENST00000432405 381 ntTSL 3 BASIC2.27□□□□□ -2.05
SNCAP37840 UBBP3-201ENST00000445497 241 ntBASIC2.27□□□□□ -2.05
SNCAP37840 AC069277.2-201ENST00000454211 432 ntBASIC2.27□□□□□ -2.05
SNCAP37840 SNORA84-201ENST00000459229 133 ntBASIC2.27□□□□□ -2.05
SNCAP37840 AP000852.1-201ENST00000472460 573 ntBASIC2.27□□□□□ -2.05
SNCAP37840 AC020898.1-201ENST00000474167 787 ntBASIC2.27□□□□□ -2.05
SNCAP37840 AC083906.5-201ENST00000503722 328 ntBASIC2.27□□□□□ -2.05
SNCAP37840 AC008885.1-201ENST00000514930 301 ntBASIC2.27□□□□□ -2.05
SNCAP37840 RN7SKP244-201ENST00000516513 307 ntBASIC2.27□□□□□ -2.05
SNCAP37840 SNORA67.7-201ENST00000516664 135 ntBASIC2.27□□□□□ -2.05
SNCAP37840 RNU4-60P-201ENST00000517239 135 ntBASIC2.27□□□□□ -2.05
SNCAP37840 AC100871.2-201ENST00000522005 327 ntTSL 3 BASIC2.27□□□□□ -2.05
SNCAP37840 AP001458.1-201ENST00000532626 92 ntTSL 3 BASIC2.27□□□□□ -2.05
SNCAP37840 C1GALT1P1-201ENST00000548895 1089 ntBASIC2.27□□□□□ -2.05
SNCAP37840 AC125611.2-201ENST00000551907 647 ntBASIC2.27□□□□□ -2.05
SNCAP37840 AL392023.2-202ENST00000555342 494 ntTSL 5 BASIC2.27□□□□□ -2.05
SNCAP37840 AC012229.1-201ENST00000558699 499 ntTSL 4 BASIC2.27□□□□□ -2.05
SNCAP37840 CASC16-202ENST00000563844 610 ntTSL 3 BASIC2.27□□□□□ -2.05
SNCAP37840 CMC2-208ENST00000564249 890 ntAPPRIS P1 TSL 5 BASIC2.27□□□□□ -2.05
SNCAP37840 FOPNL-204ENST00000573396 735 ntTSL 3 BASIC2.27□□□□□ -2.05
SNCAP37840 IGHV3-29-201ENST00000604817 344 ntBASIC2.27□□□□□ -2.05
SNCAP37840 AL109618.2-201ENST00000605527 211 ntBASIC2.27□□□□□ -2.05
SNCAP37840 MACROD2-IT1-202ENST00000605675 575 ntTSL 5 BASIC2.27□□□□□ -2.05
SNCAP37840 AC012314.7-201ENST00000619693 93 ntBASIC2.27□□□□□ -2.05
SNCAP37840 AC022079.2-201ENST00000619739 566 ntBASIC2.27□□□□□ -2.05
SNCAP37840 AC026422.1-201ENST00000623961 452 ntBASIC2.27□□□□□ -2.05
SNCAP37840 OR51F1-202ENST00000624103 939 ntAPPRIS ALT1 BASIC2.27□□□□□ -2.05
SNCAP37840 LINC00836-203ENST00000628620 1179 ntTSL 5 BASIC2.27□□□□□ -2.05
SNCAP37840 AC107398.4-201ENST00000635489 765 ntTSL 2 BASIC2.27□□□□□ -2.05
SNCAP37840 OSTN-202ENST00000445281 3134 ntTSL 5 BASIC2.27□□□□□ -2.05
SNCAP37840 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC2.27□□□□□ -2.05
SNCAP37840 AC080100.1-201ENST00000624239 5356 ntBASIC2.27□□□□□ -2.05
SNCAP37840 ZBTB26-202ENST00000373656 4443 ntAPPRIS P1 TSL 1 (best) BASIC2.26□□□□□ -2.05
SNCAP37840 NME5-201ENST00000265191 1198 ntAPPRIS P1 TSL 1 (best) BASIC2.26□□□□□ -2.05
SNCAP37840 SPANXN4-201ENST00000370504 560 ntAPPRIS ALT2 TSL 5 BASIC2.26□□□□□ -2.05
SNCAP37840 EQTN-202ENST00000380032 1033 ntAPPRIS P3 TSL 1 (best) BASIC2.26□□□□□ -2.05
SNCAP37840 AL645465.1-201ENST00000417765 642 ntTSL 3 BASIC2.26□□□□□ -2.05
SNCAP37840 USP9YP36-201ENST00000424581 829 ntBASIC2.26□□□□□ -2.05
SNCAP37840 CR769767.1-201ENST00000436337 346 ntBASIC2.26□□□□□ -2.05
SNCAP37840 CACYBPP1-201ENST00000438592 684 ntBASIC2.26□□□□□ -2.05
SNCAP37840 VN1R34P-201ENST00000447387 883 ntBASIC2.26□□□□□ -2.05
SNCAP37840 SLC16A12-AS1-202ENST00000454270 478 ntTSL 2 BASIC2.26□□□□□ -2.05
SNCAP37840 AL109741.2-201ENST00000455561 343 ntBASIC2.26□□□□□ -2.05
SNCAP37840 RN7SL504P-201ENST00000494496 287 ntBASIC2.26□□□□□ -2.05
SNCAP37840 UNC13C-202ENST00000539562 938 ntTSL 1 (best) BASIC2.26□□□□□ -2.05
SNCAP37840 AC025265.2-201ENST00000551905 478 ntTSL 3 BASIC2.26□□□□□ -2.05
SNCAP37840 AL358335.2-201ENST00000555693 487 ntTSL 3 BASIC2.26□□□□□ -2.05
SNCAP37840 ZNF861P-201ENST00000588126 639 ntBASIC2.26□□□□□ -2.05
SNCAP37840 AC007566.2-201ENST00000603642 413 ntBASIC2.26□□□□□ -2.05
SNCAP37840 AC245389.1-201ENST00000605141 529 ntBASIC2.26□□□□□ -2.05
SNCAP37840 AC104237.2-201ENST00000612456 443 ntBASIC2.26□□□□□ -2.05
SNCAP37840 AC022509.4-201ENST00000621404 572 ntBASIC2.26□□□□□ -2.05
SNCAP37840 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC2.26□□□□□ -2.05
SNCAP37840 DTHD1-205ENST00000507598 2606 ntTSL 1 (best) BASIC2.26□□□□□ -2.05
SNCAP37840 IL23R-205ENST00000637002 2208 ntTSL 1 (best) BASIC2.26□□□□□ -2.05
SNCAP37840 DCUN1D1-208ENST00000632685 3147 ntTSL 1 (best) BASIC2.26□□□□□ -2.05
SNCAP37840 ADGRG7-202ENST00000475887 2035 ntTSL 2 BASIC2.25□□□□□ -2.05
SNCAP37840 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC2.25□□□□□ -2.05
SNCAP37840 RNA5SP393-201ENST00000363423 117 ntBASIC2.25□□□□□ -2.05
SNCAP37840 SNORD56.5-201ENST00000364281 72 ntBASIC2.25□□□□□ -2.05
SNCAP37840 SNORA7.2-201ENST00000364446 145 ntBASIC2.25□□□□□ -2.05
SNCAP37840 RNU6ATAC34P-201ENST00000408879 121 ntBASIC2.25□□□□□ -2.05
SNCAP37840 EI24P1-201ENST00000416584 867 ntBASIC2.25□□□□□ -2.05
SNCAP37840 AC007403.1-201ENST00000427579 567 ntTSL 4 BASIC2.25□□□□□ -2.05
SNCAP37840 AC129850.1-201ENST00000436203 508 ntBASIC2.25□□□□□ -2.05
SNCAP37840 AL513043.1-201ENST00000439124 535 ntBASIC2.25□□□□□ -2.05
SNCAP37840 AL672167.1-201ENST00000441381 464 ntTSL 3 BASIC2.25□□□□□ -2.05
SNCAP37840 AC016903.1-201ENST00000444017 588 ntTSL 4 BASIC2.25□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 100 ms