Protein–RNA interactions for Protein: P31415

CASQ1, Calsequestrin-1, humanhuman

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASQ1P31415 AL031985.2-201ENST00000600955 480 ntBASIC3.43□□□□□ -1.86
CASQ1P31415 AC009570.1-201ENST00000609599 745 ntBASIC3.43□□□□□ -1.86
CASQ1P31415 AC004696.1-201ENST00000614345 607 ntBASIC3.43□□□□□ -1.86
CASQ1P31415 AC008083.4-201ENST00000615076 444 ntBASIC3.43□□□□□ -1.86
CASQ1P31415 LINC02431-201ENST00000503929 3601 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
CASQ1P31415 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC3.43□□□□□ -1.86
CASQ1P31415 ANGPTL1-201ENST00000234816 3348 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
CASQ1P31415 CUL1P1-201ENST00000509510 2425 ntBASIC3.43□□□□□ -1.86
CASQ1P31415 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC3.43□□□□□ -1.86
CASQ1P31415 SLC38A9-201ENST00000318672 2369 ntAPPRIS P1 TSL 2 BASIC3.43□□□□□ -1.86
CASQ1P31415 TMEM59-205ENST00000371348 1911 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
CASQ1P31415 AC108206.1-201ENST00000570186 4159 ntBASIC3.42□□□□□ -1.86
CASQ1P31415 CFHR3-201ENST00000367425 1645 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
CASQ1P31415 SNORD56.5-201ENST00000364281 72 ntBASIC3.42□□□□□ -1.86
CASQ1P31415 U8.11-201ENST00000384699 133 ntBASIC3.42□□□□□ -1.86
CASQ1P31415 U8.12-201ENST00000384701 133 ntBASIC3.42□□□□□ -1.86
CASQ1P31415 FAT1P1-201ENST00000406588 507 ntBASIC3.42□□□□□ -1.86
CASQ1P31415 AC010967.2-201ENST00000418451 333 ntTSL 2 BASIC3.42□□□□□ -1.86
CASQ1P31415 OR1AA1P-201ENST00000419597 916 ntBASIC3.42□□□□□ -1.86
CASQ1P31415 AL035423.1-201ENST00000420331 213 ntBASIC3.42□□□□□ -1.86
CASQ1P31415 AC006548.1-201ENST00000427470 102 ntBASIC3.42□□□□□ -1.86
CASQ1P31415 AF230666.1-201ENST00000429151 786 ntTSL 2 BASIC3.42□□□□□ -1.86
CASQ1P31415 AC005208.1-201ENST00000435112 599 ntTSL 3 BASIC3.42□□□□□ -1.86
CASQ1P31415 LINC01967-202ENST00000437506 515 ntTSL 5 BASIC3.42□□□□□ -1.86
CASQ1P31415 AC006037.1-201ENST00000437967 287 ntTSL 5 BASIC3.42□□□□□ -1.86
CASQ1P31415 ATP5C1P1-201ENST00000441945 895 ntBASIC3.42□□□□□ -1.86
CASQ1P31415 RPS12P18-201ENST00000442381 270 ntBASIC3.42□□□□□ -1.86
CASQ1P31415 UBBP3-201ENST00000445497 241 ntBASIC3.42□□□□□ -1.86
CASQ1P31415 CASP1-203ENST00000446369 948 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
CASQ1P31415 SUN3-208ENST00000453192 801 ntTSL 5 BASIC3.42□□□□□ -1.86
CASQ1P31415 LINC01768-201ENST00000453347 476 ntTSL 3 BASIC3.42□□□□□ -1.86
CASQ1P31415 OR6K1P-201ENST00000456766 971 ntBASIC3.42□□□□□ -1.86
CASQ1P31415 U8.18-201ENST00000459285 133 ntBASIC3.42□□□□□ -1.86
CASQ1P31415 RPL30P14-201ENST00000482744 348 ntBASIC3.42□□□□□ -1.86
CASQ1P31415 AC104304.1-201ENST00000505797 291 ntAPPRIS P1 TSL 3 BASIC3.42□□□□□ -1.86
CASQ1P31415 IGKV2-26-201ENST00000518305 343 ntBASIC3.42□□□□□ -1.86
CASQ1P31415 AC108863.1-201ENST00000520863 650 ntTSL 3 BASIC3.42□□□□□ -1.86
CASQ1P31415 AL353699.1-201ENST00000529078 365 ntTSL 3 BASIC3.42□□□□□ -1.86
CASQ1P31415 HSPE1P20-201ENST00000538133 289 ntBASIC3.42□□□□□ -1.86
CASQ1P31415 AC063948.1-201ENST00000547360 379 ntTSL 5 BASIC3.42□□□□□ -1.86
CASQ1P31415 EIF5A2P1-201ENST00000564027 460 ntBASIC3.42□□□□□ -1.86
CASQ1P31415 AC087463.3-201ENST00000570105 415 ntTSL 3 BASIC3.42□□□□□ -1.86
CASQ1P31415 LIVAR-201ENST00000578633 384 ntTSL 3 BASIC3.42□□□□□ -1.86
CASQ1P31415 AC090371.2-203ENST00000578782 473 ntTSL 3 BASIC3.42□□□□□ -1.86
CASQ1P31415 AL355812.1-201ENST00000603215 216 ntBASIC3.42□□□□□ -1.86
CASQ1P31415 AL355810.1-201ENST00000614629 552 ntBASIC3.42□□□□□ -1.86
CASQ1P31415 CR381572.1-201ENST00000625098 102 ntBASIC3.42□□□□□ -1.86
CASQ1P31415 SOX2-OT-255ENST00000630150 649 ntTSL 5 BASIC3.42□□□□□ -1.86
CASQ1P31415 SMARCA2-229ENST00000634781 1106 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
CASQ1P31415 U6.107-201ENST00000637108 79 ntBASIC3.42□□□□□ -1.86
CASQ1P31415 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC3.42□□□□□ -1.86
CASQ1P31415 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC3.42□□□□□ -1.86
CASQ1P31415 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC3.42□□□□□ -1.86
CASQ1P31415 AC090740.1-201ENST00000623193 2262 ntBASIC3.42□□□□□ -1.86
CASQ1P31415 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC3.42□□□□□ -1.86
CASQ1P31415 AC046144.1-201ENST00000478559 1853 ntBASIC3.41□□□□□ -1.86
CASQ1P31415 RNA5SP492-201ENST00000411330 114 ntBASIC3.41□□□□□ -1.86
CASQ1P31415 RPL19P1-201ENST00000411635 428 ntBASIC3.41□□□□□ -1.86
CASQ1P31415 DUTP6-201ENST00000425573 462 ntBASIC3.41□□□□□ -1.86
CASQ1P31415 AC022537.1-201ENST00000435271 446 ntTSL 3 BASIC3.41□□□□□ -1.86
CASQ1P31415 AL590999.1-206ENST00000437947 436 ntTSL 3 BASIC3.41□□□□□ -1.86
CASQ1P31415 CEACAMP9-201ENST00000442990 513 ntBASIC3.41□□□□□ -1.86
CASQ1P31415 NOTCH2P1-201ENST00000443481 624 ntBASIC3.41□□□□□ -1.86
CASQ1P31415 TIPARP-AS1-201ENST00000463449 735 ntTSL 3 BASIC3.41□□□□□ -1.86
CASQ1P31415 AC025518.1-201ENST00000479856 347 ntBASIC3.41□□□□□ -1.86
CASQ1P31415 AC009901.1-201ENST00000506703 541 ntBASIC3.41□□□□□ -1.86
CASQ1P31415 LINC01861-201ENST00000509568 537 ntTSL 4 BASIC3.41□□□□□ -1.86
CASQ1P31415 UQCRB-202ENST00000517523 515 ntTSL 2 BASIC3.41□□□□□ -1.86
CASQ1P31415 MIR5685-201ENST00000579080 79 ntBASIC3.41□□□□□ -1.86
CASQ1P31415 MIR4286-201ENST00000580651 93 ntBASIC3.41□□□□□ -1.86
CASQ1P31415 AC090772.1-201ENST00000583782 507 ntTSL 5 BASIC3.41□□□□□ -1.86
CASQ1P31415 AC104534.1-201ENST00000594558 566 ntTSL 4 BASIC3.41□□□□□ -1.86
CASQ1P31415 AC008687.2-201ENST00000597865 520 ntBASIC3.41□□□□□ -1.86
CASQ1P31415 NUTF2P8-201ENST00000604593 363 ntBASIC3.41□□□□□ -1.86
CASQ1P31415 AL133507.1-201ENST00000605269 557 ntBASIC3.41□□□□□ -1.86
CASQ1P31415 AC090912.3-201ENST00000609775 533 ntBASIC3.41□□□□□ -1.86
CASQ1P31415 KBTBD2-208ENST00000621876 1196 ntTSL 5 BASIC3.41□□□□□ -1.86
CASQ1P31415 Metazoa_SRP.193-201ENST00000622007 277 ntBASIC3.41□□□□□ -1.86
CASQ1P31415 OR1S2-202ENST00000641683 941 ntAPPRIS P1 BASIC3.41□□□□□ -1.86
CASQ1P31415 AC139713.2-210ENST00000641741 992 ntBASIC3.41□□□□□ -1.86
CASQ1P31415 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC3.41□□□□□ -1.86
CASQ1P31415 ISPD-AS1-202ENST00000438573 2252 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
CASQ1P31415 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
CASQ1P31415 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.86
CASQ1P31415 MACC1-205ENST00000589011 2686 ntAPPRIS P1 TSL 5 BASIC3.4□□□□□ -1.86
CASQ1P31415 ZNF85-203ENST00000345030 1689 ntAPPRIS ALT2 TSL 5 BASIC3.4□□□□□ -1.86
CASQ1P31415 TPTE2-202ENST00000382978 1677 ntTSL 5 BASIC3.4□□□□□ -1.86
CASQ1P31415 RNU6-1249P-201ENST00000363237 111 ntBASIC3.4□□□□□ -1.87
CASQ1P31415 RNA5SP139-201ENST00000364340 117 ntBASIC3.4□□□□□ -1.87
CASQ1P31415 PLG-203ENST00000366924 1166 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
CASQ1P31415 TRAV24-201ENST00000390453 343 ntAPPRIS P1 BASIC3.4□□□□□ -1.87
CASQ1P31415 SNORD17-201ENST00000390930 237 ntBASIC3.4□□□□□ -1.87
CASQ1P31415 RNU6-628P-201ENST00000410675 107 ntBASIC3.4□□□□□ -1.87
CASQ1P31415 RAP1BP1-201ENST00000412709 553 ntBASIC3.4□□□□□ -1.87
CASQ1P31415 TEX41-203ENST00000420472 765 ntTSL 3 BASIC3.4□□□□□ -1.87
CASQ1P31415 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC3.4□□□□□ -1.87
CASQ1P31415 AL357832.1-201ENST00000427460 420 ntTSL 3 BASIC3.4□□□□□ -1.87
CASQ1P31415 LINC01850-201ENST00000429916 357 ntTSL 3 BASIC3.4□□□□□ -1.87
CASQ1P31415 ZNF736P6Y-201ENST00000447526 1213 ntBASIC3.4□□□□□ -1.87
CASQ1P31415 CYCSP35-201ENST00000451978 304 ntBASIC3.4□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 103.7 ms