Protein–RNA interactions for Protein: P31276

HOXC13, Homeobox protein Hox-C13, humanhuman

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC13P31276 AC010406.1-201ENST00000507948 555 ntTSL 3 BASIC4.12□□□□□ -1.75
HOXC13P31276 AC105313.1-201ENST00000509121 353 ntBASIC4.12□□□□□ -1.75
HOXC13P31276 AC079160.1-201ENST00000513489 739 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
HOXC13P31276 RNA5SP468-201ENST00000516782 93 ntBASIC4.12□□□□□ -1.75
HOXC13P31276 MTCO1P47-201ENST00000523889 1271 ntBASIC4.12□□□□□ -1.75
HOXC13P31276 AC026894.1-202ENST00000533843 477 ntTSL 5 BASIC4.12□□□□□ -1.75
HOXC13P31276 MED6-207ENST00000554963 975 ntAPPRIS ALT1 TSL 5 BASIC4.12□□□□□ -1.75
HOXC13P31276 AC012170.3-201ENST00000560159 297 ntTSL 2 BASIC4.12□□□□□ -1.75
HOXC13P31276 AL035071.2-201ENST00000565572 459 ntTSL 3 BASIC4.12□□□□□ -1.75
HOXC13P31276 MIR7515HG-239ENST00000591053 1113 ntTSL 5 BASIC4.12□□□□□ -1.75
HOXC13P31276 KLHL23-207ENST00000602521 630 ntTSL 3 BASIC4.12□□□□□ -1.75
HOXC13P31276 ELOCP35-201ENST00000604289 336 ntBASIC4.12□□□□□ -1.75
HOXC13P31276 AP003973.1-201ENST00000604639 691 ntBASIC4.12□□□□□ -1.75
HOXC13P31276 AL583856.2-201ENST00000606298 543 ntBASIC4.12□□□□□ -1.75
HOXC13P31276 AC106052.1-201ENST00000608029 497 ntBASIC4.12□□□□□ -1.75
HOXC13P31276 AF129408.1-201ENST00000608767 431 ntBASIC4.12□□□□□ -1.75
HOXC13P31276 AP005137.2-201ENST00000609238 400 ntBASIC4.12□□□□□ -1.75
HOXC13P31276 AC092650.2-201ENST00000619984 902 ntBASIC4.12□□□□□ -1.75
HOXC13P31276 CCT7-217ENST00000626868 249 ntTSL 5 BASIC4.12□□□□□ -1.75
HOXC13P31276 AC013437.2-201ENST00000639587 677 ntBASIC4.12□□□□□ -1.75
HOXC13P31276 RAPH1-203ENST00000374493 3909 ntAPPRIS ALT2 TSL 5 BASIC4.12□□□□□ -1.75
HOXC13P31276 DMD-207ENST00000378677 13932 ntAPPRIS ALT2 TSL 5 BASIC4.12□□□□□ -1.75
HOXC13P31276 AL033397.1-201ENST00000502390 3653 ntTSL 2 BASIC4.12□□□□□ -1.75
HOXC13P31276 THEMIS-202ENST00000368250 4101 ntAPPRIS P3 TSL 5 BASIC4.12□□□□□ -1.75
HOXC13P31276 AF117829.1-206ENST00000621883 3802 ntBASIC4.12□□□□□ -1.75
HOXC13P31276 VEPH1-203ENST00000392833 3979 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
HOXC13P31276 PLCB1-233ENST00000637919 5074 ntTSL 5 BASIC4.12□□□□□ -1.75
HOXC13P31276 SYT14-208ENST00000637265 13567 ntTSL 5 BASIC4.11□□□□□ -1.75
HOXC13P31276 ZNF616-201ENST00000330123 2563 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
HOXC13P31276 MYCBP2-211ENST00000544440 14664 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
HOXC13P31276 MYSM1-203ENST00000472487 7785 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
HOXC13P31276 OR10D3-203ENST00000641546 3566 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
HOXC13P31276 LINC01566-202ENST00000569242 2801 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
HOXC13P31276 TAS2R9-201ENST00000240691 1075 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
HOXC13P31276 AKAP14-204ENST00000371431 977 ntAPPRIS P3 TSL 1 (best) BASIC4.11□□□□□ -1.75
HOXC13P31276 LINC01545-201ENST00000377879 521 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
HOXC13P31276 RNU6-339P-201ENST00000384310 107 ntBASIC4.11□□□□□ -1.75
HOXC13P31276 MIR591-201ENST00000385290 95 ntBASIC4.11□□□□□ -1.75
HOXC13P31276 AL139098.1-201ENST00000407291 389 ntBASIC4.11□□□□□ -1.75
HOXC13P31276 MIR1251-201ENST00000408552 70 ntBASIC4.11□□□□□ -1.75
HOXC13P31276 RN7SKP156-201ENST00000410308 342 ntBASIC4.11□□□□□ -1.75
HOXC13P31276 RNU4-65P-201ENST00000410473 140 ntBASIC4.11□□□□□ -1.75
HOXC13P31276 AC027644.1-201ENST00000419595 298 ntBASIC4.11□□□□□ -1.75
HOXC13P31276 LINC02263-202ENST00000420701 597 ntTSL 5 BASIC4.11□□□□□ -1.75
HOXC13P31276 AL049637.1-201ENST00000424664 503 ntTSL 5 BASIC4.11□□□□□ -1.75
HOXC13P31276 UBE2E2-AS1-202ENST00000430018 499 ntTSL 2 BASIC4.11□□□□□ -1.75
HOXC13P31276 MRPL42P4-201ENST00000453267 443 ntBASIC4.11□□□□□ -1.75
HOXC13P31276 NANOGP10-201ENST00000453325 895 ntBASIC4.11□□□□□ -1.75
HOXC13P31276 MTATP6P14-201ENST00000455189 673 ntBASIC4.11□□□□□ -1.75
HOXC13P31276 LINC01510-203ENST00000458082 626 ntTSL 3 BASIC4.11□□□□□ -1.75
HOXC13P31276 MTCO2P6-201ENST00000463134 685 ntBASIC4.11□□□□□ -1.75
HOXC13P31276 SUB1-203ENST00000502897 562 ntAPPRIS P1 TSL 4 BASIC4.11□□□□□ -1.75
HOXC13P31276 LINC02161-201ENST00000503691 420 ntTSL 3 BASIC4.11□□□□□ -1.75
HOXC13P31276 RNU1-95P-201ENST00000516357 160 ntBASIC4.11□□□□□ -1.75
HOXC13P31276 RNU1-128P-201ENST00000516704 160 ntBASIC4.11□□□□□ -1.75
HOXC13P31276 RNU6-1028P-201ENST00000517164 93 ntBASIC4.11□□□□□ -1.75
HOXC13P31276 AC087369.1-201ENST00000520775 996 ntBASIC4.11□□□□□ -1.75
HOXC13P31276 SYF2P1-201ENST00000550658 413 ntBASIC4.11□□□□□ -1.75
HOXC13P31276 AC090607.1-201ENST00000560057 449 ntTSL 3 BASIC4.11□□□□□ -1.75
HOXC13P31276 LINC02170-201ENST00000561519 555 ntTSL 4 BASIC4.11□□□□□ -1.75
HOXC13P31276 AC025917.1-201ENST00000562062 612 ntTSL 3 BASIC4.11□□□□□ -1.75
HOXC13P31276 AC013565.1-201ENST00000565938 597 ntTSL 2 BASIC4.11□□□□□ -1.75
HOXC13P31276 AC093519.1-201ENST00000566109 298 ntBASIC4.11□□□□□ -1.75
HOXC13P31276 AP005271.1-201ENST00000582470 412 ntTSL 3 BASIC4.11□□□□□ -1.75
HOXC13P31276 AC090506.1-201ENST00000583089 572 ntTSL 4 BASIC4.11□□□□□ -1.75
HOXC13P31276 AP001029.3-201ENST00000588063 596 ntBASIC4.11□□□□□ -1.75
HOXC13P31276 AC015726.1-201ENST00000602353 681 ntBASIC4.11□□□□□ -1.75
HOXC13P31276 AC011468.4-201ENST00000603942 409 ntBASIC4.11□□□□□ -1.75
HOXC13P31276 AC087752.4-201ENST00000605911 462 ntBASIC4.11□□□□□ -1.75
HOXC13P31276 AC012557.2-201ENST00000605919 418 ntBASIC4.11□□□□□ -1.75
HOXC13P31276 AC093673.2-201ENST00000609674 331 ntBASIC4.11□□□□□ -1.75
HOXC13P31276 AL391261.4-201ENST00000616012 481 ntBASIC4.11□□□□□ -1.75
HOXC13P31276 AL136164.4-201ENST00000625013 2135 ntBASIC4.11□□□□□ -1.75
HOXC13P31276 SATB1-AS1-266ENST00000630271 813 ntTSL 5 BASIC4.11□□□□□ -1.75
HOXC13P31276 AL034408.1-202ENST00000636088 415 ntBASIC4.11□□□□□ -1.75
HOXC13P31276 ZNF382-210ENST00000639288 834 ntTSL 5 BASIC4.11□□□□□ -1.75
HOXC13P31276 EPC1-203ENST00000375110 3909 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
HOXC13P31276 TTC21B-AS1-201ENST00000440322 2260 ntTSL 4 BASIC4.11□□□□□ -1.75
HOXC13P31276 UGT2B10-201ENST00000265403 1931 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
HOXC13P31276 KCNJ16-201ENST00000283936 4062 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
HOXC13P31276 CLIC2-202ENST00000369449 2655 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
HOXC13P31276 ITCH-202ENST00000374864 6401 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
HOXC13P31276 MRPL42-206ENST00000549982 15582 ntAPPRIS P2 TSL 1 (best) BASIC4.1□□□□□ -1.75
HOXC13P31276 SPATA31D2P-201ENST00000429999 4388 ntBASIC4.1□□□□□ -1.75
HOXC13P31276 PTP4A1-205ENST00000626021 2203 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
HOXC13P31276 AC091534.1-201ENST00000548779 1751 ntTSL 2 BASIC4.1□□□□□ -1.75
HOXC13P31276 AC002546.1-201ENST00000588041 2504 ntBASIC4.1□□□□□ -1.75
HOXC13P31276 SCAI-201ENST00000336505 12079 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
HOXC13P31276 TFPI-202ENST00000339091 1088 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
HOXC13P31276 QKI-202ENST00000361195 1063 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
HOXC13P31276 RNU6-582P-201ENST00000362989 107 ntBASIC4.1□□□□□ -1.75
HOXC13P31276 SNORD74.4-201ENST00000364129 80 ntBASIC4.1□□□□□ -1.75
HOXC13P31276 SNORA5A-201ENST00000384111 134 ntBASIC4.1□□□□□ -1.75
HOXC13P31276 SNORD116-23-201ENST00000384645 92 ntBASIC4.1□□□□□ -1.75
HOXC13P31276 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
HOXC13P31276 RPL23AP47-201ENST00000408017 460 ntBASIC4.1□□□□□ -1.75
HOXC13P31276 RPS7P9-201ENST00000414704 586 ntBASIC4.1□□□□□ -1.75
HOXC13P31276 LHFPL3-AS1-203ENST00000417290 950 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
HOXC13P31276 AIMP1P1-201ENST00000418670 937 ntBASIC4.1□□□□□ -1.75
HOXC13P31276 AC091390.3-201ENST00000426478 338 ntBASIC4.1□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 149.9 ms