Protein–RNA interactions for Protein: P25942

CD40, Tumor necrosis factor receptor superfamily member 5, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40P25942 NKAIN2-204ENST00000545433 3052 ntTSL 5 BASIC4.59□□□□□ -1.67
CD40P25942 AC007557.3-201ENST00000418591 3135 ntTSL 2 BASIC4.59□□□□□ -1.67
CD40P25942 IFRD1-217ENST00000621379 3232 ntTSL 2 BASIC4.59□□□□□ -1.67
CD40P25942 CKAP5-202ENST00000354558 6428 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
CD40P25942 SPATA5-201ENST00000274008 8137 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
CD40P25942 BDH2-201ENST00000296424 1126 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
CD40P25942 FANCI-201ENST00000300027 4713 ntAPPRIS P3 TSL 5 BASIC4.59□□□□□ -1.67
CD40P25942 Y_RNA.22-201ENST00000362492 102 ntBASIC4.59□□□□□ -1.67
CD40P25942 Y_RNA.86-201ENST00000363020 111 ntBASIC4.59□□□□□ -1.67
CD40P25942 CRP-202ENST00000368110 667 ntTSL 3 BASIC4.59□□□□□ -1.67
CD40P25942 PRIM2-202ENST00000370687 909 ntTSL 3 BASIC4.59□□□□□ -1.67
CD40P25942 GPR34-201ENST00000378138 1815 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
CD40P25942 RNU6-637P-201ENST00000384050 107 ntBASIC4.59□□□□□ -1.67
CD40P25942 RNU6-356P-201ENST00000384140 107 ntBASIC4.59□□□□□ -1.67
CD40P25942 TRAJ58-201ENST00000390481 63 ntAPPRIS P1 BASIC4.59□□□□□ -1.67
CD40P25942 MOBP-203ENST00000415443 577 ntAPPRIS ALT2 TSL 4 BASIC4.59□□□□□ -1.67
CD40P25942 AL158834.2-201ENST00000415731 696 ntTSL 2 BASIC4.59□□□□□ -1.67
CD40P25942 NPHP1-204ENST00000417665 2246 ntTSL 5 BASIC4.59□□□□□ -1.67
CD40P25942 AL592437.2-201ENST00000421655 2434 ntBASIC4.59□□□□□ -1.67
CD40P25942 AC005062.1-206ENST00000424516 710 ntTSL 3 BASIC4.59□□□□□ -1.67
CD40P25942 LINC01844-201ENST00000432677 2237 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
CD40P25942 NDUFB4P8-201ENST00000435351 367 ntBASIC4.59□□□□□ -1.67
CD40P25942 GAPDHP58-201ENST00000438477 1006 ntBASIC4.59□□□□□ -1.67
CD40P25942 AC245427.2-201ENST00000438839 263 ntTSL 3 BASIC4.59□□□□□ -1.67
CD40P25942 CACYBPP2-201ENST00000453625 678 ntBASIC4.59□□□□□ -1.67
CD40P25942 AL359095.1-201ENST00000457383 635 ntTSL 3 BASIC4.59□□□□□ -1.67
CD40P25942 AC079168.1-201ENST00000458741 345 ntBASIC4.59□□□□□ -1.67
CD40P25942 RPS20P20-201ENST00000460498 340 ntBASIC4.59□□□□□ -1.67
CD40P25942 RPL21P103-201ENST00000479921 488 ntBASIC4.59□□□□□ -1.67
CD40P25942 AC123768.1-201ENST00000486285 432 ntTSL 3 BASIC4.59□□□□□ -1.67
CD40P25942 AC083800.1-201ENST00000490594 246 ntAPPRIS P1 TSL 3 BASIC4.59□□□□□ -1.67
CD40P25942 AC097173.1-201ENST00000505862 819 ntBASIC4.59□□□□□ -1.67
CD40P25942 AC114774.1-201ENST00000507410 1770 ntBASIC4.59□□□□□ -1.67
CD40P25942 AC010395.1-201ENST00000507627 697 ntTSL 5 BASIC4.59□□□□□ -1.67
CD40P25942 PCBP2P3-201ENST00000509726 843 ntBASIC4.59□□□□□ -1.67
CD40P25942 RNU6-64P-201ENST00000517119 105 ntBASIC4.59□□□□□ -1.67
CD40P25942 MAL2-208ENST00000523307 556 ntTSL 4 BASIC4.59□□□□□ -1.67
CD40P25942 PICALM-209ENST00000528398 2049 ntTSL 2 BASIC4.59□□□□□ -1.67
CD40P25942 MRPL51-203ENST00000538814 501 ntTSL 2 BASIC4.59□□□□□ -1.67
CD40P25942 MRPL51-207ENST00000543959 472 ntTSL 3 BASIC4.59□□□□□ -1.67
CD40P25942 AC006206.1-201ENST00000544842 3387 ntBASIC4.59□□□□□ -1.67
CD40P25942 AC087477.3-201ENST00000559214 552 ntTSL 4 BASIC4.59□□□□□ -1.67
CD40P25942 AC055876.1-202ENST00000567053 138 ntBASIC4.59□□□□□ -1.67
CD40P25942 NXPH1-205ENST00000602349 1953 ntBASIC4.59□□□□□ -1.67
CD40P25942 AC025857.2-201ENST00000602711 238 ntBASIC4.59□□□□□ -1.67
CD40P25942 TUG1_1.1-201ENST00000610654 145 ntBASIC4.59□□□□□ -1.67
CD40P25942 AC244107.2-201ENST00000611773 76 ntBASIC4.59□□□□□ -1.67
CD40P25942 AC068506.1-202ENST00000613388 545 ntTSL 3 BASIC4.59□□□□□ -1.67
CD40P25942 MIR6715B-201ENST00000637172 77 ntBASIC4.59□□□□□ -1.67
CD40P25942 AC138649.5-201ENST00000637456 137 ntBASIC4.59□□□□□ -1.67
CD40P25942 CCNB3-201ENST00000276014 4513 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.68
CD40P25942 MAPK10-370ENST00000641943 4117 ntAPPRIS P2 BASIC4.59□□□□□ -1.68
CD40P25942 RPGRIP1L-201ENST00000262135 8195 ntAPPRIS P3 TSL 5 BASIC4.59□□□□□ -1.68
CD40P25942 AQP9-201ENST00000219919 3034 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.68
CD40P25942 AGO3-203ENST00000373191 19687 ntAPPRIS P1 TSL 2 BASIC4.59□□□□□ -1.68
CD40P25942 MIA3-203ENST00000344922 8142 ntAPPRIS P2 TSL 5 BASIC4.59□□□□□ -1.68
CD40P25942 STAU2-220ENST00000522695 2646 ntAPPRIS ALT1 TSL 1 (best) BASIC4.59□□□□□ -1.68
CD40P25942 ADCY10-201ENST00000367848 5055 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
CD40P25942 EPHA3-202ENST00000452448 2546 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
CD40P25942 ADGRL2-206ENST00000370721 5023 ntTSL 5 BASIC4.58□□□□□ -1.68
CD40P25942 ARHGAP5-206ENST00000539826 4881 ntAPPRIS P3 TSL 1 (best) BASIC4.58□□□□□ -1.68
CD40P25942 CCR2-202ENST00000400888 2232 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
CD40P25942 EIF3H-209ENST00000521861 3959 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
CD40P25942 OSBPL9P4-201ENST00000371707 1800 ntBASIC4.58□□□□□ -1.68
CD40P25942 AC100757.1-201ENST00000616872 1835 ntBASIC4.58□□□□□ -1.68
CD40P25942 FAT3-201ENST00000409404 19030 ntAPPRIS P1 TSL 5 BASIC4.58□□□□□ -1.68
CD40P25942 CDK14-203ENST00000406263 5163 ntAPPRIS ALT2 TSL 1 (best) BASIC4.58□□□□□ -1.68
CD40P25942 CDC42BPA-204ENST00000366767 9320 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
CD40P25942 CYP7A1-201ENST00000301645 2950 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
CD40P25942 AC083837.1-201ENST00000565297 2994 ntBASIC4.58□□□□□ -1.68
CD40P25942 AC131971.1-201ENST00000332881 1482 ntBASIC4.58□□□□□ -1.68
CD40P25942 RCOR3-201ENST00000367005 4246 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
CD40P25942 PRR4-201ENST00000228811 563 ntAPPRIS P3 TSL 1 (best) BASIC4.58□□□□□ -1.68
CD40P25942 HSPE1P11-201ENST00000339579 310 ntBASIC4.58□□□□□ -1.68
CD40P25942 MAX-203ENST00000341653 330 ntTSL 2 BASIC4.58□□□□□ -1.68
CD40P25942 RN7SKP185-201ENST00000362813 326 ntBASIC4.58□□□□□ -1.68
CD40P25942 RNU6-511P-201ENST00000363496 107 ntBASIC4.58□□□□□ -1.68
CD40P25942 MIR558-201ENST00000384920 94 ntBASIC4.58□□□□□ -1.68
CD40P25942 RNU6-1009P-201ENST00000390996 107 ntBASIC4.58□□□□□ -1.68
CD40P25942 AL645927.1-201ENST00000396783 406 ntBASIC4.58□□□□□ -1.68
CD40P25942 U3.36-201ENST00000408418 213 ntBASIC4.58□□□□□ -1.68
CD40P25942 RNA5SP296-201ENST00000410523 111 ntBASIC4.58□□□□□ -1.68
CD40P25942 RNU2-41P-201ENST00000410991 178 ntBASIC4.58□□□□□ -1.68
CD40P25942 RN7SKP126-201ENST00000411143 300 ntBASIC4.58□□□□□ -1.68
CD40P25942 Z86062.2-201ENST00000411442 380 ntTSL 5 BASIC4.58□□□□□ -1.68
CD40P25942 LIMS1-AS1-201ENST00000411710 477 ntTSL 3 BASIC4.58□□□□□ -1.68
CD40P25942 AL354868.1-201ENST00000417077 482 ntBASIC4.58□□□□□ -1.68
CD40P25942 AL445989.1-202ENST00000418943 776 ntTSL 2 BASIC4.58□□□□□ -1.68
CD40P25942 SDCBPP3-201ENST00000419629 891 ntBASIC4.58□□□□□ -1.68
CD40P25942 LINC00368-201ENST00000422994 650 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
CD40P25942 RPL35AP22-201ENST00000436855 335 ntBASIC4.58□□□□□ -1.68
CD40P25942 AL359771.1-201ENST00000441809 379 ntTSL 5 BASIC4.58□□□□□ -1.68
CD40P25942 AL356124.2-201ENST00000442449 391 ntTSL 5 BASIC4.58□□□□□ -1.68
CD40P25942 CEACAMP7-201ENST00000444105 496 ntBASIC4.58□□□□□ -1.68
CD40P25942 TRBV2-201ENST00000455382 421 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
CD40P25942 PMCHL2-203ENST00000457791 237 ntBASIC4.58□□□□□ -1.68
CD40P25942 AC005062.1-201ENST00000457921 566 ntTSL 3 BASIC4.58□□□□□ -1.68
CD40P25942 snoU13.3-201ENST00000459441 104 ntBASIC4.58□□□□□ -1.68
CD40P25942 DAP3-209ENST00000465375 729 ntTSL 2 BASIC4.58□□□□□ -1.68
CD40P25942 AC009127.1-201ENST00000467090 155 ntBASIC4.58□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 80.6 ms