Protein–RNA interactions for Protein: P19447

ERCC3, TFIIH basal transcription factor complex helicase XPB subunit, humanhuman

Predictions only

Length 782 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3P19447 LINC00894-201ENST00000413076 403 ntTSL 3 BASIC5.98□□□□□ -1.45
ERCC3P19447 USP9YP6-201ENST00000413550 854 ntBASIC5.98□□□□□ -1.45
ERCC3P19447 RPL30P16-201ENST00000419341 429 ntBASIC5.98□□□□□ -1.45
ERCC3P19447 DYDC1-203ENST00000421924 708 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
ERCC3P19447 CHIAP3-201ENST00000423668 1133 ntBASIC5.98□□□□□ -1.45
ERCC3P19447 USP9YP9-201ENST00000429406 715 ntBASIC5.98□□□□□ -1.45
ERCC3P19447 TEX41-205ENST00000431734 529 ntTSL 4 BASIC5.98□□□□□ -1.45
ERCC3P19447 RPL7P54-201ENST00000438336 674 ntBASIC5.98□□□□□ -1.45
ERCC3P19447 AL138799.2-201ENST00000439024 343 ntTSL 2 BASIC5.98□□□□□ -1.45
ERCC3P19447 RPS29P10-201ENST00000439197 166 ntBASIC5.98□□□□□ -1.45
ERCC3P19447 PARGP1-202ENST00000440803 790 ntTSL 2 BASIC5.98□□□□□ -1.45
ERCC3P19447 RPL23AP20-201ENST00000447965 421 ntBASIC5.98□□□□□ -1.45
ERCC3P19447 AC069549.1-201ENST00000451584 499 ntTSL 3 BASIC5.98□□□□□ -1.45
ERCC3P19447 AC108059.3-201ENST00000456388 214 ntBASIC5.98□□□□□ -1.45
ERCC3P19447 RPS29P33-201ENST00000456717 146 ntBASIC5.98□□□□□ -1.45
ERCC3P19447 AL034349.1-201ENST00000458367 549 ntTSL 5 BASIC5.98□□□□□ -1.45
ERCC3P19447 APOA2-210ENST00000491350 263 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
ERCC3P19447 AC119150.1-201ENST00000507143 563 ntTSL 2 BASIC5.98□□□□□ -1.45
ERCC3P19447 AC021146.1-201ENST00000511202 716 ntBASIC5.98□□□□□ -1.45
ERCC3P19447 EGFLAM-AS2-202ENST00000514377 539 ntTSL 3 BASIC5.98□□□□□ -1.45
ERCC3P19447 SDCBP-207ENST00000520168 1097 ntTSL 2 BASIC5.98□□□□□ -1.45
ERCC3P19447 NRG1-IT1-203ENST00000523743 292 ntTSL 3 BASIC5.98□□□□□ -1.45
ERCC3P19447 AC084291.1-201ENST00000544667 548 ntTSL 2 BASIC5.98□□□□□ -1.45
ERCC3P19447 LINC02293-202ENST00000548385 358 ntTSL 3 BASIC5.98□□□□□ -1.45
ERCC3P19447 AC007513.1-201ENST00000548740 379 ntTSL 3 BASIC5.98□□□□□ -1.45
ERCC3P19447 SETP7-201ENST00000552169 453 ntBASIC5.98□□□□□ -1.45
ERCC3P19447 LINC02286-201ENST00000552425 285 ntTSL 2 BASIC5.98□□□□□ -1.45
ERCC3P19447 LINC00520-201ENST00000554186 831 ntTSL 5 BASIC5.98□□□□□ -1.45
ERCC3P19447 PWRN1-205ENST00000565295 465 ntTSL 3 BASIC5.98□□□□□ -1.45
ERCC3P19447 ZNF540-204ENST00000586792 564 ntTSL 3 BASIC5.98□□□□□ -1.45
ERCC3P19447 AC092364.1-202ENST00000593824 565 ntTSL 4 BASIC5.98□□□□□ -1.45
ERCC3P19447 AC108738.1-201ENST00000603703 237 ntBASIC5.98□□□□□ -1.45
ERCC3P19447 AL357078.3-201ENST00000607528 618 ntBASIC5.98□□□□□ -1.45
ERCC3P19447 AC010632.3-201ENST00000611377 369 ntBASIC5.98□□□□□ -1.45
ERCC3P19447 AC022306.2-201ENST00000617563 647 ntBASIC5.98□□□□□ -1.45
ERCC3P19447 APAF1-205ENST00000547045 3744 ntAPPRIS ALT1 TSL 1 (best) BASIC5.98□□□□□ -1.45
ERCC3P19447 AC000374.1-201ENST00000434698 1745 ntBASIC5.98□□□□□ -1.45
ERCC3P19447 TCP11X1-203ENST00000623912 1715 ntTSL 5 BASIC5.98□□□□□ -1.45
ERCC3P19447 SLC16A9-201ENST00000395347 3646 ntAPPRIS P1 TSL 2 BASIC5.98□□□□□ -1.45
ERCC3P19447 IRF5P1-201ENST00000504852 2164 ntBASIC5.98□□□□□ -1.45
ERCC3P19447 PTPRO-204ENST00000445537 4062 ntAPPRIS ALT2 TSL 2 BASIC5.98□□□□□ -1.45
ERCC3P19447 TET2-203ENST00000380013 9679 ntAPPRIS P2 TSL 5 BASIC5.98□□□□□ -1.45
ERCC3P19447 DDX4-204ENST00000505374 2884 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
ERCC3P19447 MTM1-203ENST00000370396 3593 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
ERCC3P19447 SRRM1-202ENST00000374389 3110 ntAPPRIS ALT2 TSL 5 BASIC5.98□□□□□ -1.45
ERCC3P19447 EPB41L2-226ENST00000530757 4360 ntTSL 2 BASIC5.98□□□□□ -1.45
ERCC3P19447 LCA5L-218ENST00000485895 2551 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
ERCC3P19447 NPFFR2-203ENST00000358749 1559 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
ERCC3P19447 CEP295-206ENST00000531700 2890 ntAPPRIS ALT2 TSL 2 BASIC5.97□□□□□ -1.45
ERCC3P19447 USP44-208ENST00000552440 1818 ntTSL 5 BASIC5.97□□□□□ -1.45
ERCC3P19447 DAZ4-207ENST00000634662 1832 ntAPPRIS ALT2 TSL 5 BASIC5.97□□□□□ -1.45
ERCC3P19447 AL445623.2-201ENST00000640307 4805 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
ERCC3P19447 EEF1A1P36-201ENST00000427807 1351 ntBASIC5.97□□□□□ -1.45
ERCC3P19447 ZNF630-207ENST00000616492 2220 ntAPPRIS ALT2 TSL 5 BASIC5.97□□□□□ -1.45
ERCC3P19447 UGT2B7-201ENST00000305231 1887 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
ERCC3P19447 RNU5A-8P-201ENST00000364102 114 ntBASIC5.97□□□□□ -1.45
ERCC3P19447 NCOA7-202ENST00000368357 5521 ntAPPRIS P3 TSL 1 (best) BASIC5.97□□□□□ -1.45
ERCC3P19447 RNU6-877P-201ENST00000383868 107 ntBASIC5.97□□□□□ -1.45
ERCC3P19447 Y_RNA.390-201ENST00000383932 102 ntBASIC5.97□□□□□ -1.45
ERCC3P19447 RNA5SP87-201ENST00000384155 118 ntBASIC5.97□□□□□ -1.45
ERCC3P19447 RNU2-62P-201ENST00000410868 191 ntBASIC5.97□□□□□ -1.45
ERCC3P19447 CCDC58P2-201ENST00000417131 366 ntBASIC5.97□□□□□ -1.45
ERCC3P19447 PLCE1-AS2-201ENST00000419353 459 ntTSL 5 BASIC5.97□□□□□ -1.45
ERCC3P19447 LINC01690-201ENST00000424837 576 ntTSL 2 BASIC5.97□□□□□ -1.45
ERCC3P19447 EZH2P1-201ENST00000431167 291 ntBASIC5.97□□□□□ -1.45
ERCC3P19447 TTTY20-201ENST00000434487 259 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
ERCC3P19447 AL354794.1-201ENST00000442103 516 ntTSL 3 BASIC5.97□□□□□ -1.45
ERCC3P19447 MRPL48P1-201ENST00000445390 636 ntBASIC5.97□□□□□ -1.45
ERCC3P19447 VN1R34P-201ENST00000447387 883 ntBASIC5.97□□□□□ -1.45
ERCC3P19447 AC004888.1-201ENST00000450480 547 ntTSL 2 BASIC5.97□□□□□ -1.45
ERCC3P19447 AC026355.2-201ENST00000456755 723 ntTSL 2 BASIC5.97□□□□□ -1.45
ERCC3P19447 UBDP1-202ENST00000457888 382 ntBASIC5.97□□□□□ -1.45
ERCC3P19447 AC105343.1-201ENST00000505586 358 ntTSL 3 BASIC5.97□□□□□ -1.45
ERCC3P19447 RN7SKP260-201ENST00000516907 149 ntBASIC5.97□□□□□ -1.45
ERCC3P19447 RNU6-528P-201ENST00000516926 100 ntBASIC5.97□□□□□ -1.45
ERCC3P19447 AC064807.2-201ENST00000521188 672 ntTSL 3 BASIC5.97□□□□□ -1.45
ERCC3P19447 AP002993.1-201ENST00000538624 210 ntTSL 5 BASIC5.97□□□□□ -1.45
ERCC3P19447 AC008083.1-201ENST00000547748 663 ntTSL 2 BASIC5.97□□□□□ -1.45
ERCC3P19447 LINC02464-201ENST00000552060 368 ntTSL 2 BASIC5.97□□□□□ -1.45
ERCC3P19447 EDDM3DP-201ENST00000554692 434 ntBASIC5.97□□□□□ -1.45
ERCC3P19447 PCLAF-207ENST00000559519 749 ntTSL 2 BASIC5.97□□□□□ -1.45
ERCC3P19447 AC091073.1-201ENST00000559620 666 ntTSL 3 BASIC5.97□□□□□ -1.45
ERCC3P19447 HNRNPCP4-201ENST00000571636 900 ntBASIC5.97□□□□□ -1.45
ERCC3P19447 AP001021.1-201ENST00000577704 244 ntTSL 3 BASIC5.97□□□□□ -1.45
ERCC3P19447 AC068790.5-201ENST00000602741 355 ntBASIC5.97□□□□□ -1.45
ERCC3P19447 AC004908.2-201ENST00000609090 574 ntBASIC5.97□□□□□ -1.45
ERCC3P19447 AL139124.1-201ENST00000609123 421 ntBASIC5.97□□□□□ -1.45
ERCC3P19447 DOCK10-202ENST00000409592 7288 ntAPPRIS ALT2 TSL 1 (best) BASIC5.97□□□□□ -1.45
ERCC3P19447 PTPN12-206ENST00000435495 2526 ntTSL 2 BASIC5.97□□□□□ -1.45
ERCC3P19447 OMG-201ENST00000247271 1947 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
ERCC3P19447 CEP162-207ENST00000617909 5095 ntTSL 5 BASIC5.97□□□□□ -1.45
ERCC3P19447 ASAH2-204ENST00000447815 2311 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
ERCC3P19447 ZNF534-202ENST00000332323 2086 ntAPPRIS P4 TSL 1 (best) BASIC5.97□□□□□ -1.45
ERCC3P19447 CDC14A-206ENST00000635056 2056 ntTSL 2 BASIC5.97□□□□□ -1.45
ERCC3P19447 AC100757.1-201ENST00000616872 1835 ntBASIC5.97□□□□□ -1.45
ERCC3P19447 PPP1R9A-206ENST00000433360 5369 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
ERCC3P19447 RIMS2-205ENST00000436393 4384 ntTSL 2 BASIC5.97□□□□□ -1.45
ERCC3P19447 CLVS1-205ENST00000519846 3622 ntAPPRIS P1 TSL 5 BASIC5.97□□□□□ -1.45
ERCC3P19447 LMNTD1-201ENST00000282881 1718 ntAPPRIS P3 TSL 2 BASIC5.96□□□□□ -1.45
ERCC3P19447 TMEM30A-202ENST00000370050 3775 ntTSL 1 (best) BASIC5.96□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 81.7 ms