Protein–RNA interactions for Protein: P19397

CD53, Leukocyte surface antigen CD53, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD53P19397 ZNF705D-202ENST00000400085 3377 ntAPPRIS P1 TSL 5 BASIC4.28□□□□□ -1.72
CD53P19397 AC090740.1-201ENST00000623193 2262 ntBASIC4.28□□□□□ -1.72
CD53P19397 LCA5L-201ENST00000288350 2416 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
CD53P19397 AC016687.3-202ENST00000505018 2404 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
CD53P19397 SNRPB2-202ENST00000377943 1588 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
CD53P19397 TMEM71-201ENST00000356838 1993 ntAPPRIS P3 TSL 1 (best) BASIC4.27□□□□□ -1.73
CD53P19397 TMEM71-210ENST00000523829 1974 ntAPPRIS ALT2 TSL 5 BASIC4.27□□□□□ -1.73
CD53P19397 PPP2R5C-226ENST00000557095 1307 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
CD53P19397 LINC01630-206ENST00000635103 4292 ntTSL 5 BASIC4.27□□□□□ -1.73
CD53P19397 NLGN1-206ENST00000457714 8242 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
CD53P19397 DEFB112-201ENST00000322246 342 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
CD53P19397 AL161781.1-201ENST00000354277 403 ntBASIC4.27□□□□□ -1.73
CD53P19397 AL138749.1-201ENST00000397864 791 ntTSL 5 BASIC4.27□□□□□ -1.73
CD53P19397 DEFB115-201ENST00000400552 267 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
CD53P19397 HMGB3P23-201ENST00000414981 585 ntBASIC4.27□□□□□ -1.73
CD53P19397 LINC00364-201ENST00000415120 611 ntTSL 3 BASIC4.27□□□□□ -1.73
CD53P19397 SSXP9-201ENST00000417503 292 ntBASIC4.27□□□□□ -1.73
CD53P19397 HMGB1P49-201ENST00000418882 569 ntBASIC4.27□□□□□ -1.73
CD53P19397 RPL21P109-201ENST00000422213 475 ntBASIC4.27□□□□□ -1.73
CD53P19397 RPL27AP8-201ENST00000424277 446 ntBASIC4.27□□□□□ -1.73
CD53P19397 LINC00353-201ENST00000435401 685 ntTSL 5 BASIC4.27□□□□□ -1.73
CD53P19397 MTND3P1-201ENST00000441336 220 ntBASIC4.27□□□□□ -1.73
CD53P19397 AC009299.3-202ENST00000445372 538 ntTSL 3 BASIC4.27□□□□□ -1.73
CD53P19397 Z83846.1-201ENST00000446798 265 ntBASIC4.27□□□□□ -1.73
CD53P19397 AC114814.3-201ENST00000449362 663 ntTSL 2 BASIC4.27□□□□□ -1.73
CD53P19397 AL359715.2-201ENST00000452402 682 ntTSL 2 BASIC4.27□□□□□ -1.73
CD53P19397 AC096543.1-201ENST00000455038 823 ntTSL 3 BASIC4.27□□□□□ -1.73
CD53P19397 AL122001.1-201ENST00000457027 370 ntBASIC4.27□□□□□ -1.73
CD53P19397 USP9YP25-201ENST00000457708 443 ntBASIC4.27□□□□□ -1.73
CD53P19397 AC092754.2-201ENST00000463506 460 ntBASIC4.27□□□□□ -1.73
CD53P19397 AC132825.2-201ENST00000483901 504 ntTSL 5 BASIC4.27□□□□□ -1.73
CD53P19397 RPL7P23-201ENST00000493874 747 ntBASIC4.27□□□□□ -1.73
CD53P19397 AC082651.2-201ENST00000496833 166 ntBASIC4.27□□□□□ -1.73
CD53P19397 LINC02496-201ENST00000509559 584 ntTSL 3 BASIC4.27□□□□□ -1.73
CD53P19397 AC092673.1-201ENST00000510203 428 ntTSL 3 BASIC4.27□□□□□ -1.73
CD53P19397 AC022483.1-201ENST00000514020 567 ntBASIC4.27□□□□□ -1.73
CD53P19397 RNA5SP216-201ENST00000516111 123 ntBASIC4.27□□□□□ -1.73
CD53P19397 RNA5SP392-201ENST00000516905 112 ntBASIC4.27□□□□□ -1.73
CD53P19397 RN7SKP92-201ENST00000517266 244 ntBASIC4.27□□□□□ -1.73
CD53P19397 IGLVVI-25-1-201ENST00000521893 249 ntBASIC4.27□□□□□ -1.73
CD53P19397 AC008662.2-201ENST00000522426 389 ntTSL 5 BASIC4.27□□□□□ -1.73
CD53P19397 COX6CP8-201ENST00000522620 226 ntBASIC4.27□□□□□ -1.73
CD53P19397 AC090857.2-201ENST00000526362 723 ntTSL 2 BASIC4.27□□□□□ -1.73
CD53P19397 AC009643.1-201ENST00000532030 391 ntBASIC4.27□□□□□ -1.73
CD53P19397 MFAP5-205ENST00000535336 566 ntTSL 4 BASIC4.27□□□□□ -1.73
CD53P19397 OSBPL9P5-201ENST00000542581 171 ntBASIC4.27□□□□□ -1.73
CD53P19397 AC084756.1-201ENST00000558237 606 ntTSL 5 BASIC4.27□□□□□ -1.73
CD53P19397 AP005901.2-201ENST00000581690 525 ntTSL 3 BASIC4.27□□□□□ -1.73
CD53P19397 LINC01791-201ENST00000589511 677 ntTSL 5 BASIC4.27□□□□□ -1.73
CD53P19397 VN1R82P-201ENST00000601481 356 ntBASIC4.27□□□□□ -1.73
CD53P19397 AL109653.1-201ENST00000603091 248 ntBASIC4.27□□□□□ -1.73
CD53P19397 AC020910.3-201ENST00000603701 874 ntBASIC4.27□□□□□ -1.73
CD53P19397 AL451064.1-201ENST00000607718 471 ntBASIC4.27□□□□□ -1.73
CD53P19397 AC007349.4-201ENST00000608114 532 ntBASIC4.27□□□□□ -1.73
CD53P19397 STARD13-AS-221ENST00000608197 604 ntTSL 5 BASIC4.27□□□□□ -1.73
CD53P19397 AC005962.2-201ENST00000611427 652 ntBASIC4.27□□□□□ -1.73
CD53P19397 SNX18P1Y-201ENST00000616231 511 ntBASIC4.27□□□□□ -1.73
CD53P19397 AC019206.1-201ENST00000621938 425 ntBASIC4.27□□□□□ -1.73
CD53P19397 RAD17P1-201ENST00000418130 2042 ntBASIC4.27□□□□□ -1.73
CD53P19397 TXNDC8-201ENST00000374507 1787 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
CD53P19397 AC105074.1-201ENST00000623380 3095 ntBASIC4.27□□□□□ -1.73
CD53P19397 SEC31A-215ENST00000505472 4159 ntTSL 5 BASIC4.27□□□□□ -1.73
CD53P19397 PCDH11X-206ENST00000373097 9146 ntAPPRIS ALT2 TSL 1 (best) BASIC4.27□□□□□ -1.73
CD53P19397 MTRR-202ENST00000440940 3215 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
CD53P19397 AC118273.1-201ENST00000525324 3006 ntBASIC4.27□□□□□ -1.73
CD53P19397 CCSER1-201ENST00000432775 3927 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
CD53P19397 ORC4-216ENST00000540442 6472 ntTSL 2 BASIC4.27□□□□□ -1.73
CD53P19397 ZNF807-201ENST00000328088 1707 ntBASIC4.26□□□□□ -1.73
CD53P19397 OR9G4-204ENST00000641668 2608 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
CD53P19397 AL513185.3-201ENST00000433335 1300 ntBASIC4.26□□□□□ -1.73
CD53P19397 SAMSN1-201ENST00000285670 2185 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
CD53P19397 OR56B2P-202ENST00000641377 2453 ntBASIC4.26□□□□□ -1.73
CD53P19397 Y_RNA.234-201ENST00000364409 97 ntBASIC4.26□□□□□ -1.73
CD53P19397 U1.1-201ENST00000384101 164 ntBASIC4.26□□□□□ -1.73
CD53P19397 AL049545.1-201ENST00000401856 572 ntBASIC4.26□□□□□ -1.73
CD53P19397 RNA5SP345-201ENST00000410646 108 ntBASIC4.26□□□□□ -1.73
CD53P19397 AL160275.2-201ENST00000412010 394 ntBASIC4.26□□□□□ -1.73
CD53P19397 AL159169.1-201ENST00000421119 127 ntBASIC4.26□□□□□ -1.73
CD53P19397 Z74021.1-201ENST00000423610 407 ntBASIC4.26□□□□□ -1.73
CD53P19397 AL122010.1-201ENST00000429293 720 ntTSL 2 BASIC4.26□□□□□ -1.73
CD53P19397 TRIM60P9Y-201ENST00000438459 816 ntBASIC4.26□□□□□ -1.73
CD53P19397 AP001434.1-201ENST00000444977 287 ntTSL 3 BASIC4.26□□□□□ -1.73
CD53P19397 TRIM60P11Y-201ENST00000445313 801 ntBASIC4.26□□□□□ -1.73
CD53P19397 AC002381.1-201ENST00000447049 280 ntBASIC4.26□□□□□ -1.73
CD53P19397 AC000111.2-201ENST00000448200 210 ntBASIC4.26□□□□□ -1.73
CD53P19397 AL359915.2-203ENST00000457043 540 ntTSL 3 BASIC4.26□□□□□ -1.73
CD53P19397 ZFRP1-201ENST00000457579 2970 ntBASIC4.26□□□□□ -1.73
CD53P19397 MEMO1P3-201ENST00000459811 302 ntBASIC4.26□□□□□ -1.73
CD53P19397 AC108860.1-201ENST00000484521 383 ntBASIC4.26□□□□□ -1.73
CD53P19397 RN7SL812P-201ENST00000493791 279 ntBASIC4.26□□□□□ -1.73
CD53P19397 AC093677.1-201ENST00000514414 678 ntBASIC4.26□□□□□ -1.73
CD53P19397 SNORA3.4-201ENST00000515969 96 ntBASIC4.26□□□□□ -1.73
CD53P19397 LINC02365-202ENST00000520280 607 ntTSL 3 BASIC4.26□□□□□ -1.73
CD53P19397 ERHP1-201ENST00000523006 310 ntBASIC4.26□□□□□ -1.73
CD53P19397 AP001330.2-201ENST00000523121 979 ntTSL 2 BASIC4.26□□□□□ -1.73
CD53P19397 RGS5-218ENST00000526176 574 ntTSL 4 BASIC4.26□□□□□ -1.73
CD53P19397 AC007834.2-201ENST00000536310 343 ntBASIC4.26□□□□□ -1.73
CD53P19397 AP001880.2-201ENST00000538233 448 ntBASIC4.26□□□□□ -1.73
CD53P19397 AC022509.2-201ENST00000540392 699 ntTSL 3 BASIC4.26□□□□□ -1.73
CD53P19397 PRB1-204ENST00000546254 1170 ntAPPRIS ALT2 TSL 5 BASIC4.26□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 83.8 ms