Protein–RNA interactions for Protein: P02452

COL1A1, Collagen alpha-1(I) chain, humanhuman

Predicted RBP Predictions only

Length 1,464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1P02452 AC079089.1-202ENST00000528800 1256 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
COL1A1P02452 AC079866.2-201ENST00000541870 515 ntTSL 3 BASIC3.21□□□□□ -1.9
COL1A1P02452 AC098826.3-201ENST00000603823 466 ntBASIC3.21□□□□□ -1.9
COL1A1P02452 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC3.21□□□□□ -1.9
COL1A1P02452 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC3.2□□□□□ -1.9
COL1A1P02452 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC3.2□□□□□ -1.9
COL1A1P02452 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC3.2□□□□□ -1.9
COL1A1P02452 AL021368.2-201ENST00000606125 5352 ntBASIC3.2□□□□□ -1.9
COL1A1P02452 Z73965.1-201ENST00000623412 2297 ntBASIC3.2□□□□□ -1.9
COL1A1P02452 ASPN-201ENST00000375543 2237 ntTSL 2 BASIC3.2□□□□□ -1.9
COL1A1P02452 AC011155.1-201ENST00000316512 456 ntBASIC3.2□□□□□ -1.9
COL1A1P02452 TRAV26-1-201ENST00000390455 537 ntAPPRIS P1 BASIC3.2□□□□□ -1.9
COL1A1P02452 AC233981.1-201ENST00000423224 461 ntBASIC3.2□□□□□ -1.9
COL1A1P02452 RWDD4P2-201ENST00000426392 563 ntBASIC3.2□□□□□ -1.9
COL1A1P02452 RPS6P12-201ENST00000432491 726 ntBASIC3.2□□□□□ -1.9
COL1A1P02452 AL662791.1-201ENST00000441992 928 ntBASIC3.2□□□□□ -1.9
COL1A1P02452 AC078785.3-201ENST00000476607 425 ntBASIC3.2□□□□□ -1.9
COL1A1P02452 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC3.2□□□□□ -1.9
COL1A1P02452 FAM172BP-201ENST00000487497 1089 ntBASIC3.2□□□□□ -1.9
COL1A1P02452 RWDD4P1-201ENST00000488019 565 ntBASIC3.2□□□□□ -1.9
COL1A1P02452 AC008565.1-201ENST00000509046 885 ntBASIC3.2□□□□□ -1.9
COL1A1P02452 AC106864.1-201ENST00000510655 640 ntTSL 3 BASIC3.2□□□□□ -1.9
COL1A1P02452 AC005351.1-201ENST00000511152 786 ntBASIC3.2□□□□□ -1.9
COL1A1P02452 OR5AK3P-201ENST00000527486 1297 ntBASIC3.2□□□□□ -1.9
COL1A1P02452 AP000462.3-201ENST00000545593 330 ntTSL 5 BASIC3.2□□□□□ -1.9
COL1A1P02452 AC105339.2-201ENST00000558342 1091 ntTSL 3 BASIC3.2□□□□□ -1.9
COL1A1P02452 AC008277.2-201ENST00000605196 797 ntBASIC3.2□□□□□ -1.9
COL1A1P02452 NFE2L2-204ENST00000423513 1382 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
COL1A1P02452 MGA-207ENST00000566586 14439 ntAPPRIS ALT2 TSL 1 (best) BASIC3.2□□□□□ -1.9
COL1A1P02452 RICTOR-201ENST00000296782 7505 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
COL1A1P02452 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC3.19□□□□□ -1.9
COL1A1P02452 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC3.19□□□□□ -1.9
COL1A1P02452 RNMT-206ENST00000589866 1879 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
COL1A1P02452 AL138828.1-203ENST00000419926 1570 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
COL1A1P02452 SUMO1-205ENST00000409205 534 ntTSL 2 BASIC3.19□□□□□ -1.9
COL1A1P02452 RAP1BP1-201ENST00000412709 553 ntBASIC3.19□□□□□ -1.9
COL1A1P02452 AL356806.1-201ENST00000422524 916 ntBASIC3.19□□□□□ -1.9
COL1A1P02452 AC068058.1-201ENST00000435782 389 ntTSL 5 BASIC3.19□□□□□ -1.9
COL1A1P02452 AL592437.1-201ENST00000443781 492 ntBASIC3.19□□□□□ -1.9
COL1A1P02452 MRPL50P4-201ENST00000446432 475 ntBASIC3.19□□□□□ -1.9
COL1A1P02452 RPL23AP15-201ENST00000450202 459 ntBASIC3.19□□□□□ -1.9
COL1A1P02452 SNRPGP5-201ENST00000456003 220 ntBASIC3.19□□□□□ -1.9
COL1A1P02452 AC016687.1-201ENST00000482574 353 ntBASIC3.19□□□□□ -1.9
COL1A1P02452 AC112204.2-201ENST00000503269 374 ntTSL 2 BASIC3.19□□□□□ -1.9
COL1A1P02452 AC097512.1-203ENST00000506425 957 ntTSL 3 BASIC3.19□□□□□ -1.9
COL1A1P02452 AC018797.3-201ENST00000513388 1241 ntBASIC3.19□□□□□ -1.9
COL1A1P02452 AC106791.1-201ENST00000514616 827 ntTSL 5 BASIC3.19□□□□□ -1.9
COL1A1P02452 RNU6-991P-201ENST00000516168 107 ntBASIC3.19□□□□□ -1.9
COL1A1P02452 AC016993.1-201ENST00000547033 1258 ntTSL 3 BASIC3.19□□□□□ -1.9
COL1A1P02452 AGGF1P8-201ENST00000562979 1000 ntBASIC3.19□□□□□ -1.9
COL1A1P02452 AC090312.2-201ENST00000582687 378 ntBASIC3.19□□□□□ -1.9
COL1A1P02452 MIR3605-201ENST00000583214 100 ntBASIC3.19□□□□□ -1.9
COL1A1P02452 AC017076.1-201ENST00000607613 578 ntBASIC3.19□□□□□ -1.9
COL1A1P02452 AC067852.7-201ENST00000623270 535 ntBASIC3.19□□□□□ -1.9
COL1A1P02452 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
COL1A1P02452 C8orf34-202ENST00000337103 3652 ntAPPRIS ALT2 TSL 1 (best) BASIC3.19□□□□□ -1.9
COL1A1P02452 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.19□□□□□ -1.9
COL1A1P02452 MSTN-201ENST00000260950 2822 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
COL1A1P02452 LRFN5-204ENST00000554171 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC3.19□□□□□ -1.9
COL1A1P02452 C1orf141-208ENST00000621590 4179 ntAPPRIS ALT2 TSL 5 BASIC3.19□□□□□ -1.9
COL1A1P02452 FILIP1L-209ENST00000487087 2321 ntTSL 5 BASIC3.19□□□□□ -1.9
COL1A1P02452 RNMT-203ENST00000543302 1849 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
COL1A1P02452 DEFB128-201ENST00000334391 373 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
COL1A1P02452 AL138787.1-202ENST00000437804 898 ntBASIC3.18□□□□□ -1.9
COL1A1P02452 AL050338.1-201ENST00000445585 786 ntTSL 3 BASIC3.18□□□□□ -1.9
COL1A1P02452 AC011037.1-201ENST00000483964 558 ntBASIC3.18□□□□□ -1.9
COL1A1P02452 ANXA2P1-201ENST00000505539 926 ntBASIC3.18□□□□□ -1.9
COL1A1P02452 RN7SKP283-201ENST00000517197 270 ntBASIC3.18□□□□□ -1.9
COL1A1P02452 AC100870.1-201ENST00000522035 505 ntBASIC3.18□□□□□ -1.9
COL1A1P02452 AP003122.3-201ENST00000526316 255 ntBASIC3.18□□□□□ -1.9
COL1A1P02452 SNORD53-201ENST00000579969 78 ntBASIC3.18□□□□□ -1.9
COL1A1P02452 PSMG2-204ENST00000585331 983 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
COL1A1P02452 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC3.18□□□□□ -1.9
COL1A1P02452 AC025034.2-201ENST00000623264 286 ntBASIC3.18□□□□□ -1.9
COL1A1P02452 CR381653.2-201ENST00000624041 768 ntBASIC3.18□□□□□ -1.9
COL1A1P02452 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
COL1A1P02452 TFEC-201ENST00000265440 6628 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
COL1A1P02452 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC3.18□□□□□ -1.9
COL1A1P02452 OR10AB1P-202ENST00000641219 1686 ntBASIC3.18□□□□□ -1.9
COL1A1P02452 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC3.18□□□□□ -1.9
COL1A1P02452 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
COL1A1P02452 BX005019.1-201ENST00000561881 1810 ntBASIC3.18□□□□□ -1.9
COL1A1P02452 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC3.18□□□□□ -1.9
COL1A1P02452 FAM114A2-210ENST00000520313 1394 ntTSL 2 BASIC3.17□□□□□ -1.9
COL1A1P02452 AC008725.1-201ENST00000605123 2263 ntBASIC3.17□□□□□ -1.9
COL1A1P02452 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
COL1A1P02452 RPL9P7-201ENST00000330965 580 ntBASIC3.17□□□□□ -1.9
COL1A1P02452 AL589765.2-201ENST00000420382 424 ntTSL 3 BASIC3.17□□□□□ -1.9
COL1A1P02452 AL049610.1-201ENST00000423374 372 ntBASIC3.17□□□□□ -1.9
COL1A1P02452 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC3.17□□□□□ -1.9
COL1A1P02452 C4orf45-201ENST00000434826 1215 ntAPPRIS P1 TSL 2 BASIC3.17□□□□□ -1.9
COL1A1P02452 AL133260.2-201ENST00000445833 396 ntTSL 3 BASIC3.17□□□□□ -1.9
COL1A1P02452 IFNWP4-201ENST00000453148 294 ntBASIC3.17□□□□□ -1.9
COL1A1P02452 HMGB1P25-201ENST00000468402 607 ntBASIC3.17□□□□□ -1.9
COL1A1P02452 RPL21P18-201ENST00000469899 480 ntBASIC3.17□□□□□ -1.9
COL1A1P02452 USP9YP5-201ENST00000511770 630 ntBASIC3.17□□□□□ -1.9
COL1A1P02452 AC084706.1-201ENST00000521879 558 ntTSL 2 BASIC3.17□□□□□ -1.9
COL1A1P02452 AP000857.1-201ENST00000532151 543 ntBASIC3.17□□□□□ -1.9
COL1A1P02452 RFPL1S-203ENST00000539579 330 ntBASIC3.17□□□□□ -1.9
COL1A1P02452 PPFIA2-AS1-202ENST00000549161 1080 ntTSL 3 BASIC3.17□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 109.7 ms