Protein–RNA interactions for Protein: O75445

USH2A, Usherin, humanhuman

Predictions only

Length 5,202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH2AO75445 AL121594.1-201ENST00000475906 575 ntBASIC1.19□□□□□ -2.22
USH2AO75445 AC092991.1-201ENST00000477176 376 ntBASIC1.19□□□□□ -2.22
USH2AO75445 SPINK13-203ENST00000512953 1022 ntAPPRIS P2 TSL 2 BASIC1.19□□□□□ -2.22
USH2AO75445 RPS3AP4-201ENST00000555161 764 ntBASIC1.19□□□□□ -2.22
USH2AO75445 NCAPGP1-201ENST00000505112 1814 ntBASIC1.19□□□□□ -2.22
USH2AO75445 ACADM-203ENST00000420607 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC1.19□□□□□ -2.22
USH2AO75445 SV2B-201ENST00000330276 11202 ntAPPRIS P1 TSL 1 (best) BASIC1.19□□□□□ -2.22
USH2AO75445 AL592494.2-201ENST00000425455 1548 ntBASIC1.19□□□□□ -2.22
USH2AO75445 BTF3P7-201ENST00000407097 488 ntBASIC1.19□□□□□ -2.22
USH2AO75445 AL078645.1-201ENST00000414377 423 ntTSL 3 BASIC1.19□□□□□ -2.22
USH2AO75445 HMGN1P33-201ENST00000432945 451 ntBASIC1.19□□□□□ -2.22
USH2AO75445 LINC01884-201ENST00000433429 440 ntTSL 3 BASIC1.19□□□□□ -2.22
USH2AO75445 AC011242.1-201ENST00000433596 1158 ntBASIC1.19□□□□□ -2.22
USH2AO75445 RPL7P54-201ENST00000438336 674 ntBASIC1.19□□□□□ -2.22
USH2AO75445 AC072039.1-201ENST00000477611 581 ntBASIC1.19□□□□□ -2.22
USH2AO75445 TTC41P-203ENST00000548527 1475 ntTSL 5 BASIC1.19□□□□□ -2.22
USH2AO75445 PPP1R9A-202ENST00000340694 9689 ntAPPRIS P1 TSL 5 BASIC1.19□□□□□ -2.22
USH2AO75445 TMEM71-201ENST00000356838 1993 ntAPPRIS P3 TSL 1 (best) BASIC1.18□□□□□ -2.22
USH2AO75445 SRGAP1-201ENST00000355086 23331 ntAPPRIS P1 TSL 1 (best) BASIC1.18□□□□□ -2.22
USH2AO75445 RNF111-206ENST00000559209 5278 ntTSL 1 (best) BASIC1.18□□□□□ -2.22
USH2AO75445 AC069499.1-201ENST00000489433 509 ntBASIC1.18□□□□□ -2.22
USH2AO75445 FTH1P11-201ENST00000517577 551 ntBASIC1.18□□□□□ -2.22
USH2AO75445 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC1.18□□□□□ -2.22
USH2AO75445 MIR4285-201ENST00000581001 85 ntBASIC1.18□□□□□ -2.22
USH2AO75445 AC007423.1-201ENST00000605009 627 ntBASIC1.18□□□□□ -2.22
USH2AO75445 AL669942.2-201ENST00000620352 697 ntBASIC1.18□□□□□ -2.22
USH2AO75445 AC006148.1-201ENST00000484322 4310 ntTSL 1 (best) BASIC1.18□□□□□ -2.22
USH2AO75445 RC3H1-201ENST00000258349 10988 ntAPPRIS P3 TSL 1 (best) BASIC1.18□□□□□ -2.22
USH2AO75445 TAS2R30-201ENST00000539585 1687 ntAPPRIS P1 BASIC1.18□□□□□ -2.22
USH2AO75445 AC012020.1-201ENST00000624541 1728 ntBASIC1.18□□□□□ -2.22
USH2AO75445 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC1.18□□□□□ -2.22
USH2AO75445 ARFGEF2-201ENST00000371917 8852 ntAPPRIS P1 TSL 1 (best) BASIC1.18□□□□□ -2.22
USH2AO75445 SLC1A2-202ENST00000395750 11538 ntAPPRIS ALT1 TSL 1 (best) BASIC1.18□□□□□ -2.22
USH2AO75445 MGA-211ENST00000570161 11859 ntAPPRIS P4 TSL 5 BASIC1.18□□□□□ -2.22
USH2AO75445 PCDH11X-205ENST00000373094 9179 ntAPPRIS P4 TSL 1 (best) BASIC1.18□□□□□ -2.22
USH2AO75445 WWP1P1-201ENST00000466609 2769 ntBASIC1.18□□□□□ -2.22
USH2AO75445 AC002543.1-201ENST00000299783 1954 ntBASIC1.18□□□□□ -2.22
USH2AO75445 RNU6-283P-201ENST00000364788 107 ntBASIC1.18□□□□□ -2.22
USH2AO75445 AC069444.1-201ENST00000489428 266 ntTSL 3 BASIC1.18□□□□□ -2.22
USH2AO75445 OR4G11P-201ENST00000492842 939 ntBASIC1.18□□□□□ -2.22
USH2AO75445 AC018682.2-201ENST00000517716 399 ntTSL 5 BASIC1.18□□□□□ -2.22
USH2AO75445 7SK.7-201ENST00000603504 247 ntBASIC1.18□□□□□ -2.22
USH2AO75445 RPAP2P1-201ENST00000603626 1168 ntBASIC1.18□□□□□ -2.22
USH2AO75445 AL390964.1-201ENST00000622486 845 ntTSL 3 BASIC1.18□□□□□ -2.22
USH2AO75445 AP001043.1-201ENST00000626259 773 ntTSL 5 BASIC1.18□□□□□ -2.22
USH2AO75445 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC1.18□□□□□ -2.22
USH2AO75445 ALMS1-207ENST00000614410 11700 ntAPPRIS ALT2 TSL 5 BASIC1.18□□□□□ -2.22
USH2AO75445 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC1.18□□□□□ -2.22
USH2AO75445 RABGAP1L-203ENST00000347255 1744 ntTSL 1 (best) BASIC1.18□□□□□ -2.22
USH2AO75445 LINC01625-201ENST00000454788 1690 ntTSL 2 BASIC1.18□□□□□ -2.22
USH2AO75445 OBSCN-205ENST00000422127 24060 ntTSL 5 BASIC1.18□□□□□ -2.22
USH2AO75445 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC1.18□□□□□ -2.22
USH2AO75445 RANP4-201ENST00000413361 655 ntBASIC1.18□□□□□ -2.22
USH2AO75445 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC1.18□□□□□ -2.22
USH2AO75445 GLRXP1-201ENST00000423261 334 ntBASIC1.18□□□□□ -2.22
USH2AO75445 AP000893.1-201ENST00000474462 794 ntBASIC1.18□□□□□ -2.22
USH2AO75445 IL7R-208ENST00000511982 612 ntTSL 2 BASIC1.18□□□□□ -2.22
USH2AO75445 RN7SKP24-201ENST00000515888 284 ntBASIC1.18□□□□□ -2.22
USH2AO75445 RNA5SP281-201ENST00000516504 135 ntBASIC1.18□□□□□ -2.22
USH2AO75445 AC023442.2-201ENST00000526455 270 ntTSL 3 BASIC1.18□□□□□ -2.22
USH2AO75445 MIR486-1-201ENST00000612171 68 ntBASIC1.18□□□□□ -2.22
USH2AO75445 MIR6845-201ENST00000613182 61 ntBASIC1.18□□□□□ -2.22
USH2AO75445 AC092442.1-201ENST00000636216 138 ntAPPRIS P1 TSL 5 BASIC1.18□□□□□ -2.22
USH2AO75445 RANBP3L-201ENST00000296604 3104 ntAPPRIS P3 TSL 1 (best) BASIC1.18□□□□□ -2.22
USH2AO75445 LINC02493-201ENST00000509964 1704 ntTSL 1 (best) BASIC1.18□□□□□ -2.22
USH2AO75445 CCNH-206ENST00000508855 2391 ntTSL 1 (best) BASIC1.18□□□□□ -2.22
USH2AO75445 AC004982.1-201ENST00000608770 1655 ntTSL 4 BASIC1.18□□□□□ -2.22
USH2AO75445 MTND5P28-201ENST00000438005 1594 ntBASIC1.18□□□□□ -2.22
USH2AO75445 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC1.18□□□□□ -2.22
USH2AO75445 OR13G1-202ENST00000642119 2568 ntAPPRIS P1 BASIC1.18□□□□□ -2.22
USH2AO75445 CASC1-202ENST00000354189 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC1.18□□□□□ -2.22
USH2AO75445 GSTA9P-201ENST00000406231 611 ntBASIC1.18□□□□□ -2.22
USH2AO75445 AC245291.1-201ENST00000419501 328 ntBASIC1.18□□□□□ -2.22
USH2AO75445 AC002075.2-201ENST00000425207 252 ntBASIC1.18□□□□□ -2.22
USH2AO75445 AC099560.2-201ENST00000457554 255 ntBASIC1.18□□□□□ -2.22
USH2AO75445 ZIC4-AS1-201ENST00000462168 268 ntTSL 5 BASIC1.18□□□□□ -2.22
USH2AO75445 RPS26P3-201ENST00000470205 348 ntBASIC1.18□□□□□ -2.22
USH2AO75445 TTC26-205ENST00000474035 1193 ntTSL 1 (best) BASIC1.18□□□□□ -2.22
USH2AO75445 LINC02143-201ENST00000519929 520 ntTSL 3 BASIC1.18□□□□□ -2.22
USH2AO75445 AC093012.1-203ENST00000548437 450 ntTSL 2 BASIC1.18□□□□□ -2.22
USH2AO75445 SNORA35B-201ENST00000607417 129 ntBASIC1.18□□□□□ -2.22
USH2AO75445 AL359740.1-201ENST00000624340 592 ntBASIC1.18□□□□□ -2.22
USH2AO75445 AL353651.2-201ENST00000635706 559 ntTSL 5 BASIC1.18□□□□□ -2.22
USH2AO75445 PCDH9-201ENST00000377861 28227 ntTSL 1 (best) BASIC1.17□□□□□ -2.22
USH2AO75445 GABPAP-201ENST00000419271 1356 ntBASIC1.17□□□□□ -2.22
USH2AO75445 CYP3A43-204ENST00000354829 1709 ntAPPRIS ALT1 TSL 1 (best) BASIC1.17□□□□□ -2.22
USH2AO75445 RNU6-253P-201ENST00000384730 105 ntBASIC1.17□□□□□ -2.22
USH2AO75445 RNA5SP31-201ENST00000411144 127 ntBASIC1.17□□□□□ -2.22
USH2AO75445 MED4-AS1-201ENST00000422483 542 ntTSL 2 BASIC1.17□□□□□ -2.22
USH2AO75445 Z99127.3-201ENST00000448158 395 ntBASIC1.17□□□□□ -2.22
USH2AO75445 BTG4P1-201ENST00000510421 183 ntBASIC1.17□□□□□ -2.22
USH2AO75445 LINC00644-201ENST00000555156 295 ntTSL 2 BASIC1.17□□□□□ -2.22
USH2AO75445 HAUS1-203ENST00000585518 506 ntTSL 5 BASIC1.17□□□□□ -2.22
USH2AO75445 HMMR-202ENST00000358715 2988 ntAPPRIS P4 TSL 1 (best) BASIC1.17□□□□□ -2.22
USH2AO75445 POU2F1-212ENST00000541643 13937 ntAPPRIS ALT2 TSL 1 (best) BASIC1.17□□□□□ -2.22
USH2AO75445 CRB1-201ENST00000367397 9023 ntTSL 2 BASIC1.17□□□□□ -2.22
USH2AO75445 DGKI-204ENST00000453654 12928 ntAPPRIS ALT2 TSL 1 (best) BASIC1.17□□□□□ -2.22
USH2AO75445 TFEC-203ENST00000393485 2704 ntTSL 2 BASIC1.17□□□□□ -2.22
USH2AO75445 SGIP1-203ENST00000371037 7768 ntAPPRIS P3 TSL 1 (best) BASIC1.17□□□□□ -2.22
USH2AO75445 AC018555.1-201ENST00000567548 1980 ntBASIC1.17□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 95.9 ms