Protein–RNA interactions for Protein: O43933

PEX1, Peroxisome biogenesis factor 1, humanhuman

Predictions only

Length 1,283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PEX1O43933 LGI1-228ENST00000637689 1802 ntTSL 5 BASIC4.55□□□□□ -1.68
PEX1O43933 CASC1-204ENST00000395990 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC4.55□□□□□ -1.68
PEX1O43933 AL031320.2-201ENST00000591892 2079 ntTSL 5 BASIC4.55□□□□□ -1.68
PEX1O43933 USP9YP4-201ENST00000424401 1745 ntBASIC4.55□□□□□ -1.68
PEX1O43933 PLCL1-203ENST00000437704 5979 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
PEX1O43933 RAPGEF6-201ENST00000296859 5618 ntAPPRIS ALT2 TSL 1 (best) BASIC4.54□□□□□ -1.68
PEX1O43933 GYPE-201ENST00000358615 1684 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
PEX1O43933 LMNTD1-204ENST00000458174 1677 ntAPPRIS ALT2 TSL 2 BASIC4.54□□□□□ -1.68
PEX1O43933 SLC17A4-201ENST00000377905 3616 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
PEX1O43933 ARF4-206ENST00000489843 1360 ntTSL 3 BASIC4.54□□□□□ -1.68
PEX1O43933 KIF3A-203ENST00000403231 2181 ntTSL 2 BASIC4.54□□□□□ -1.68
PEX1O43933 RGS5-212ENST00000618415 5812 ntTSL 4 BASIC4.54□□□□□ -1.68
PEX1O43933 CENPI-201ENST00000372926 2375 ntAPPRIS ALT2 TSL 5 BASIC4.54□□□□□ -1.68
PEX1O43933 FKTN-201ENST00000223528 7364 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
PEX1O43933 RNA5SP443-201ENST00000363083 132 ntBASIC4.54□□□□□ -1.68
PEX1O43933 RHOT1P2-201ENST00000366423 333 ntBASIC4.54□□□□□ -1.68
PEX1O43933 FAM26F-203ENST00000368606 546 ntTSL 3 BASIC4.54□□□□□ -1.68
PEX1O43933 RNU6-809P-201ENST00000384461 107 ntBASIC4.54□□□□□ -1.68
PEX1O43933 RNU6-780P-201ENST00000391030 104 ntBASIC4.54□□□□□ -1.68
PEX1O43933 CALM2P3-201ENST00000400429 449 ntBASIC4.54□□□□□ -1.68
PEX1O43933 RPS3AP3-201ENST00000411933 242 ntBASIC4.54□□□□□ -1.68
PEX1O43933 MTATP6P27-201ENST00000416987 621 ntBASIC4.54□□□□□ -1.68
PEX1O43933 AC008154.2-201ENST00000420268 414 ntTSL 3 BASIC4.54□□□□□ -1.68
PEX1O43933 IGKV1OR9-1-201ENST00000424370 284 ntBASIC4.54□□□□□ -1.68
PEX1O43933 AC233728.2-201ENST00000425348 757 ntBASIC4.54□□□□□ -1.68
PEX1O43933 LINC02263-203ENST00000426240 515 ntTSL 5 BASIC4.54□□□□□ -1.68
PEX1O43933 RPS26P47-201ENST00000427219 348 ntBASIC4.54□□□□□ -1.68
PEX1O43933 LINC00382-201ENST00000427918 890 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
PEX1O43933 UBXN7-204ENST00000428095 1173 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
PEX1O43933 NPM1P34-201ENST00000428821 893 ntBASIC4.54□□□□□ -1.68
PEX1O43933 BTF3P10-201ENST00000433415 495 ntBASIC4.54□□□□□ -1.68
PEX1O43933 AL353748.1-201ENST00000440753 474 ntBASIC4.54□□□□□ -1.68
PEX1O43933 AL512326.1-201ENST00000443050 721 ntBASIC4.54□□□□□ -1.68
PEX1O43933 AC073284.1-201ENST00000448086 404 ntTSL 3 BASIC4.54□□□□□ -1.68
PEX1O43933 RPL39P6-201ENST00000448289 150 ntBASIC4.54□□□□□ -1.68
PEX1O43933 PSPHP1-201ENST00000450062 261 ntBASIC4.54□□□□□ -1.68
PEX1O43933 AL590365.1-201ENST00000450788 243 ntBASIC4.54□□□□□ -1.68
PEX1O43933 BTF3P5-201ENST00000457252 467 ntBASIC4.54□□□□□ -1.68
PEX1O43933 AL359095.1-201ENST00000457383 635 ntTSL 3 BASIC4.54□□□□□ -1.68
PEX1O43933 snoU109.1-201ENST00000459339 135 ntBASIC4.54□□□□□ -1.68
PEX1O43933 RPS29P22-201ENST00000472363 168 ntBASIC4.54□□□□□ -1.68
PEX1O43933 ARHGEF3-AS1-201ENST00000477246 489 ntTSL 2 BASIC4.54□□□□□ -1.68
PEX1O43933 AC079943.2-201ENST00000488999 716 ntTSL 3 BASIC4.54□□□□□ -1.68
PEX1O43933 AC012170.1-201ENST00000495139 359 ntBASIC4.54□□□□□ -1.68
PEX1O43933 AL136537.1-202ENST00000501725 430 ntTSL 3 BASIC4.54□□□□□ -1.68
PEX1O43933 AC022272.1-201ENST00000503478 777 ntTSL 2 BASIC4.54□□□□□ -1.68
PEX1O43933 SUB1-206ENST00000506237 908 ntAPPRIS P1 TSL 2 BASIC4.54□□□□□ -1.68
PEX1O43933 AC108078.1-201ENST00000508073 725 ntBASIC4.54□□□□□ -1.68
PEX1O43933 AC093824.1-201ENST00000508796 343 ntBASIC4.54□□□□□ -1.68
PEX1O43933 AC104119.1-201ENST00000508829 339 ntTSL 5 BASIC4.54□□□□□ -1.68
PEX1O43933 AC093809.1-201ENST00000509155 340 ntBASIC4.54□□□□□ -1.68
PEX1O43933 AC098799.2-201ENST00000509466 868 ntBASIC4.54□□□□□ -1.68
PEX1O43933 PTGES3P3-201ENST00000511479 482 ntBASIC4.54□□□□□ -1.68
PEX1O43933 LINC00616-203ENST00000512536 568 ntTSL 4 BASIC4.54□□□□□ -1.68
PEX1O43933 OR7H2P-201ENST00000513483 306 ntBASIC4.54□□□□□ -1.68
PEX1O43933 AC114781.4-201ENST00000513707 639 ntBASIC4.54□□□□□ -1.68
PEX1O43933 LINC02061-201ENST00000514225 335 ntTSL 3 BASIC4.54□□□□□ -1.68
PEX1O43933 RNA5SP497-201ENST00000516081 97 ntBASIC4.54□□□□□ -1.68
PEX1O43933 RNU6-347P-201ENST00000516658 105 ntBASIC4.54□□□□□ -1.68
PEX1O43933 AC008694.2-201ENST00000517591 306 ntBASIC4.54□□□□□ -1.68
PEX1O43933 MTCO2P4-201ENST00000517968 247 ntBASIC4.54□□□□□ -1.68
PEX1O43933 AC005740.3-201ENST00000520882 344 ntTSL 2 BASIC4.54□□□□□ -1.68
PEX1O43933 AC022878.1-201ENST00000530684 149 ntBASIC4.54□□□□□ -1.68
PEX1O43933 KIRREL3-AS2-201ENST00000532988 492 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
PEX1O43933 AC084880.2-201ENST00000536009 501 ntTSL 3 BASIC4.54□□□□□ -1.68
PEX1O43933 AC073651.3-201ENST00000545999 417 ntTSL 3 BASIC4.54□□□□□ -1.68
PEX1O43933 LINC02306-201ENST00000546412 529 ntTSL 3 BASIC4.54□□□□□ -1.68
PEX1O43933 AC025030.2-201ENST00000552558 567 ntTSL 2 BASIC4.54□□□□□ -1.68
PEX1O43933 PSMA3-213ENST00000557508 814 ntTSL 5 BASIC4.54□□□□□ -1.68
PEX1O43933 BLOC1S6-206ENST00000564765 706 ntTSL 4 BASIC4.54□□□□□ -1.68
PEX1O43933 MIR4737-201ENST00000583979 81 ntBASIC4.54□□□□□ -1.68
PEX1O43933 SNORD39.3-201ENST00000584451 71 ntBASIC4.54□□□□□ -1.68
PEX1O43933 RPL27-207ENST00000590864 569 ntTSL 2 BASIC4.54□□□□□ -1.68
PEX1O43933 HMGB2P1-201ENST00000591146 634 ntBASIC4.54□□□□□ -1.68
PEX1O43933 AC092364.1-201ENST00000598561 471 ntTSL 3 BASIC4.54□□□□□ -1.68
PEX1O43933 BNIP3P33-201ENST00000598912 569 ntBASIC4.54□□□□□ -1.68
PEX1O43933 AL139395.1-201ENST00000603662 160 ntBASIC4.54□□□□□ -1.68
PEX1O43933 AC112187.2-201ENST00000604345 283 ntBASIC4.54□□□□□ -1.68
PEX1O43933 AL353621.2-201ENST00000605340 133 ntBASIC4.54□□□□□ -1.68
PEX1O43933 AC090948.2-201ENST00000607363 564 ntBASIC4.54□□□□□ -1.68
PEX1O43933 AP001506.1-201ENST00000615444 211 ntBASIC4.54□□□□□ -1.68
PEX1O43933 AC136475.10-201ENST00000620253 385 ntBASIC4.54□□□□□ -1.68
PEX1O43933 DUXAP9-208ENST00000622815 614 ntBASIC4.54□□□□□ -1.68
PEX1O43933 MIR6863-201ENST00000636112 90 ntBASIC4.54□□□□□ -1.68
PEX1O43933 MIR6715B-201ENST00000637172 77 ntBASIC4.54□□□□□ -1.68
PEX1O43933 OR8J3-203ENST00000641913 3047 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
PEX1O43933 AC012618.3-205ENST00000637896 1496 ntBASIC4.54□□□□□ -1.68
PEX1O43933 PRLR-217ENST00000618457 11688 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
PEX1O43933 MEI4-201ENST00000602452 4800 ntAPPRIS P1 TSL 5 BASIC4.54□□□□□ -1.68
PEX1O43933 ADAM7-202ENST00000380789 3358 ntAPPRIS ALT2 TSL 5 BASIC4.54□□□□□ -1.68
PEX1O43933 AC025125.1-201ENST00000624743 1922 ntBASIC4.54□□□□□ -1.68
PEX1O43933 GHR-213ENST00000622294 4312 ntTSL 5 BASIC4.54□□□□□ -1.68
PEX1O43933 WDR89-201ENST00000267522 1687 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
PEX1O43933 DICER1-212ENST00000541352 5621 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
PEX1O43933 SAMMSON-226ENST00000642089 1582 ntBASIC4.53□□□□□ -1.68
PEX1O43933 SLC10A2-201ENST00000245312 3779 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
PEX1O43933 SCN3A-209ENST00000639244 8854 ntTSL 5 BASIC4.53□□□□□ -1.68
PEX1O43933 KCNU1-201ENST00000399881 3695 ntAPPRIS P1 TSL 2 BASIC4.53□□□□□ -1.68
PEX1O43933 KC6-201ENST00000592302 1713 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
PEX1O43933 BDH2-201ENST00000296424 1126 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 127.9 ms