Protein–RNA interactions for Protein: O00635

TRIM38, E3 ubiquitin-protein ligase TRIM38, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM38O00635 CENPE-202ENST00000380026 8241 ntTSL 1 (best) BASIC4.59□□□□□ -1.68
TRIM38O00635 ELAVL4-203ENST00000371821 3349 ntTSL 5 BASIC4.59□□□□□ -1.68
TRIM38O00635 RWDD2B-207ENST00000493196 3094 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.68
TRIM38O00635 RIMS1-206ENST00000425662 2799 ntTSL 1 (best) BASIC4.59□□□□□ -1.68
TRIM38O00635 CNGA1-209ENST00000544810 2722 ntAPPRIS ALT2 TSL 5 BASIC4.59□□□□□ -1.68
TRIM38O00635 AK9-201ENST00000285397 2566 ntTSL 1 (best) BASIC4.59□□□□□ -1.68
TRIM38O00635 AC097504.1-201ENST00000515103 2415 ntBASIC4.58□□□□□ -1.68
TRIM38O00635 KIF3A-203ENST00000403231 2181 ntTSL 2 BASIC4.58□□□□□ -1.68
TRIM38O00635 RAD17P1-201ENST00000418130 2042 ntBASIC4.58□□□□□ -1.68
TRIM38O00635 SCN1A-210ENST00000635776 10107 ntTSL 5 BASIC4.58□□□□□ -1.68
TRIM38O00635 LRRC39-204ENST00000620882 1951 ntTSL 5 BASIC4.58□□□□□ -1.68
TRIM38O00635 LARP4-202ENST00000347328 3621 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
TRIM38O00635 MAPK10-286ENST00000641208 8747 ntBASIC4.58□□□□□ -1.68
TRIM38O00635 AL359893.1-201ENST00000447628 1580 ntBASIC4.58□□□□□ -1.68
TRIM38O00635 SYCP1-210ENST00000618516 3109 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
TRIM38O00635 CLEC7A-202ENST00000304084 1130 ntAPPRIS ALT1 TSL 1 (best) BASIC4.58□□□□□ -1.68
TRIM38O00635 Y_RNA.41-201ENST00000362646 102 ntBASIC4.58□□□□□ -1.68
TRIM38O00635 AC016769.3-201ENST00000396562 315 ntBASIC4.58□□□□□ -1.68
TRIM38O00635 ARL4AP5-201ENST00000404372 599 ntBASIC4.58□□□□□ -1.68
TRIM38O00635 PPP1R1C-203ENST00000409702 1157 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
TRIM38O00635 MTND1P21-201ENST00000412991 285 ntBASIC4.58□□□□□ -1.68
TRIM38O00635 CDK8P2-201ENST00000415020 547 ntBASIC4.58□□□□□ -1.68
TRIM38O00635 AC097717.1-228ENST00000417006 754 ntTSL 3 BASIC4.58□□□□□ -1.68
TRIM38O00635 AP000550.2-201ENST00000417463 774 ntTSL 5 BASIC4.58□□□□□ -1.68
TRIM38O00635 Z74021.1-201ENST00000423610 407 ntBASIC4.58□□□□□ -1.68
TRIM38O00635 OFD1P13Y-201ENST00000431179 1232 ntBASIC4.58□□□□□ -1.68
TRIM38O00635 AL139415.2-201ENST00000431968 163 ntBASIC4.58□□□□□ -1.68
TRIM38O00635 AP000552.3-201ENST00000434730 775 ntTSL 5 BASIC4.58□□□□□ -1.68
TRIM38O00635 AL121974.1-201ENST00000437859 377 ntTSL 3 BASIC4.58□□□□□ -1.68
TRIM38O00635 CBX1P1-201ENST00000440184 427 ntBASIC4.58□□□□□ -1.68
TRIM38O00635 LINC00113-203ENST00000442550 572 ntTSL 3 BASIC4.58□□□□□ -1.68
TRIM38O00635 AL136972.1-201ENST00000443471 351 ntTSL 3 BASIC4.58□□□□□ -1.68
TRIM38O00635 MTCO1P19-201ENST00000443487 500 ntBASIC4.58□□□□□ -1.68
TRIM38O00635 H2AFZP5-201ENST00000446960 382 ntBASIC4.58□□□□□ -1.68
TRIM38O00635 AC073486.1-201ENST00000453278 531 ntTSL 5 BASIC4.58□□□□□ -1.68
TRIM38O00635 Z98749.1-201ENST00000454123 541 ntTSL 5 BASIC4.58□□□□□ -1.68
TRIM38O00635 AC010618.1-201ENST00000469924 477 ntBASIC4.58□□□□□ -1.68
TRIM38O00635 RC3H2-207ENST00000471874 749 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
TRIM38O00635 AL136126.1-201ENST00000473603 402 ntBASIC4.58□□□□□ -1.68
TRIM38O00635 AC068724.1-201ENST00000487100 792 ntBASIC4.58□□□□□ -1.68
TRIM38O00635 AC107027.1-201ENST00000503006 575 ntTSL 2 BASIC4.58□□□□□ -1.68
TRIM38O00635 HTN1-204ENST00000511674 623 ntAPPRIS P1 TSL 2 BASIC4.58□□□□□ -1.68
TRIM38O00635 AC018616.1-201ENST00000524085 546 ntTSL 5 BASIC4.58□□□□□ -1.68
TRIM38O00635 LINC01486-201ENST00000538041 716 ntTSL 2 BASIC4.58□□□□□ -1.68
TRIM38O00635 ADI1P3-201ENST00000549509 470 ntBASIC4.58□□□□□ -1.68
TRIM38O00635 FKBP1BP1-201ENST00000553366 325 ntBASIC4.58□□□□□ -1.68
TRIM38O00635 AL133371.2-201ENST00000556624 294 ntTSL 3 BASIC4.58□□□□□ -1.68
TRIM38O00635 AL358333.2-201ENST00000556834 529 ntTSL 5 BASIC4.58□□□□□ -1.68
TRIM38O00635 AL133457.1-201ENST00000564251 987 ntBASIC4.58□□□□□ -1.68
TRIM38O00635 AC015912.2-201ENST00000571053 181 ntBASIC4.58□□□□□ -1.68
TRIM38O00635 LARP7P2-201ENST00000575306 125 ntBASIC4.58□□□□□ -1.68
TRIM38O00635 MIR5186-201ENST00000577504 120 ntBASIC4.58□□□□□ -1.68
TRIM38O00635 AC023575.1-201ENST00000580510 358 ntBASIC4.58□□□□□ -1.68
TRIM38O00635 LINC01533-202ENST00000588694 632 ntTSL 2 BASIC4.58□□□□□ -1.68
TRIM38O00635 AC083899.3-201ENST00000603413 594 ntBASIC4.58□□□□□ -1.68
TRIM38O00635 DUXAP11-201ENST00000603858 526 ntBASIC4.58□□□□□ -1.68
TRIM38O00635 AC018714.1-201ENST00000605028 208 ntBASIC4.58□□□□□ -1.68
TRIM38O00635 AC011944.2-201ENST00000624440 683 ntBASIC4.58□□□□□ -1.68
TRIM38O00635 AC068724.3-201ENST00000625906 87 ntBASIC4.58□□□□□ -1.68
TRIM38O00635 TIGD2-201ENST00000317005 2083 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
TRIM38O00635 CR381670.1-201ENST00000624291 1693 ntBASIC4.57□□□□□ -1.68
TRIM38O00635 EXOC1-202ENST00000349598 3248 ntAPPRIS ALT1 TSL 2 BASIC4.57□□□□□ -1.68
TRIM38O00635 AC091046.3-201ENST00000631455 1574 ntBASIC4.57□□□□□ -1.68
TRIM38O00635 MARCH1-201ENST00000274056 5367 ntAPPRIS P1 TSL 4 BASIC4.57□□□□□ -1.68
TRIM38O00635 NMD3P1-201ENST00000439704 1488 ntBASIC4.57□□□□□ -1.68
TRIM38O00635 C6orf10-207ENST00000533191 2170 ntAPPRIS ALT2 TSL 1 (best) BASIC4.57□□□□□ -1.68
TRIM38O00635 TLR6-205ENST00000610323 1443 ntTSL 5 BASIC4.57□□□□□ -1.68
TRIM38O00635 XCL1-201ENST00000367818 1367 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
TRIM38O00635 RACGAP1-202ENST00000427314 3229 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
TRIM38O00635 ZNF137P-201ENST00000456718 1920 ntBASIC4.57□□□□□ -1.68
TRIM38O00635 SPA17-201ENST00000227135 853 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
TRIM38O00635 RPL26-201ENST00000293842 524 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
TRIM38O00635 C1orf100-201ENST00000308105 579 ntAPPRIS P1 TSL 2 BASIC4.57□□□□□ -1.68
TRIM38O00635 Y_RNA.18-201ENST00000362461 102 ntBASIC4.57□□□□□ -1.68
TRIM38O00635 RNA5SP28-201ENST00000363841 119 ntBASIC4.57□□□□□ -1.68
TRIM38O00635 RN7SKP227-201ENST00000364445 330 ntBASIC4.57□□□□□ -1.68
TRIM38O00635 RNA5SP509-201ENST00000364577 119 ntBASIC4.57□□□□□ -1.68
TRIM38O00635 RNU6-761P-201ENST00000384148 107 ntBASIC4.57□□□□□ -1.68
TRIM38O00635 RNU6ATAC5P-201ENST00000388104 126 ntBASIC4.57□□□□□ -1.68
TRIM38O00635 MOB4-205ENST00000409916 829 ntTSL 3 BASIC4.57□□□□□ -1.68
TRIM38O00635 RNU2-16P-201ENST00000410712 136 ntBASIC4.57□□□□□ -1.68
TRIM38O00635 AL592435.1-201ENST00000416401 469 ntTSL 3 BASIC4.57□□□□□ -1.68
TRIM38O00635 EIF4EP1-201ENST00000422311 642 ntBASIC4.57□□□□□ -1.68
TRIM38O00635 AL162384.1-201ENST00000437881 499 ntTSL 2 BASIC4.57□□□□□ -1.68
TRIM38O00635 AL590399.3-201ENST00000438072 543 ntTSL 5 BASIC4.57□□□□□ -1.68
TRIM38O00635 AC098614.3-201ENST00000438957 440 ntBASIC4.57□□□□□ -1.68
TRIM38O00635 AL590399.6-201ENST00000446396 307 ntBASIC4.57□□□□□ -1.68
TRIM38O00635 LINC01150-201ENST00000455671 315 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
TRIM38O00635 AL392086.1-201ENST00000457632 299 ntTSL 3 BASIC4.57□□□□□ -1.68
TRIM38O00635 AC109327.1-201ENST00000471666 403 ntBASIC4.57□□□□□ -1.68
TRIM38O00635 RPL30P6-201ENST00000475925 342 ntBASIC4.57□□□□□ -1.68
TRIM38O00635 AC108752.1-203ENST00000496674 339 ntTSL 5 BASIC4.57□□□□□ -1.68
TRIM38O00635 AC084117.1-201ENST00000496975 270 ntTSL 5 BASIC4.57□□□□□ -1.68
TRIM38O00635 TEMN3-AS1-201ENST00000510211 401 ntTSL 3 BASIC4.57□□□□□ -1.68
TRIM38O00635 AC024958.1-201ENST00000519364 902 ntTSL 5 BASIC4.57□□□□□ -1.68
TRIM38O00635 AL359233.1-201ENST00000554029 364 ntTSL 3 BASIC4.57□□□□□ -1.68
TRIM38O00635 NUDT7-203ENST00000563839 316 ntTSL 3 BASIC4.57□□□□□ -1.68
TRIM38O00635 AC099313.1-201ENST00000568437 452 ntTSL 2 BASIC4.57□□□□□ -1.68
TRIM38O00635 AC002094.2-201ENST00000577850 1121 ntTSL 5 BASIC4.57□□□□□ -1.68
TRIM38O00635 AL157938.2-201ENST00000587264 894 ntTSL 5 BASIC4.57□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 98.5 ms