Protein–RNA interactions for Protein: O00322

UPK1A, Uroplakin-1a, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1AO00322 AC090617.9-201ENST00000623751 147 ntBASIC2.92□□□□□ -1.94
UPK1AO00322 AC048347.1-201ENST00000624621 427 ntBASIC2.92□□□□□ -1.94
UPK1AO00322 AC245427.3-201ENST00000632041 51 ntAPPRIS P1 BASIC2.92□□□□□ -1.94
UPK1AO00322 U6.107-201ENST00000637108 79 ntBASIC2.92□□□□□ -1.94
UPK1AO00322 ASAH1-263ENST00000637872 886 ntTSL 5 BASIC2.92□□□□□ -1.94
UPK1AO00322 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC2.92□□□□□ -1.94
UPK1AO00322 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
UPK1AO00322 LINC02070-201ENST00000460586 1321 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
UPK1AO00322 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC2.91□□□□□ -1.94
UPK1AO00322 C6orf10-202ENST00000375015 2173 ntAPPRIS ALT2 TSL 5 BASIC2.91□□□□□ -1.94
UPK1AO00322 RPL39-201ENST00000361575 401 ntAPPRIS P1 TSL 1 (best) BASIC2.91□□□□□ -1.94
UPK1AO00322 TMCO2-201ENST00000372766 739 ntAPPRIS P1 TSL 1 (best) BASIC2.91□□□□□ -1.94
UPK1AO00322 SNORA7.4-201ENST00000384249 137 ntBASIC2.91□□□□□ -1.94
UPK1AO00322 RNU6-883P-201ENST00000384597 107 ntBASIC2.91□□□□□ -1.94
UPK1AO00322 U3.19-201ENST00000390893 196 ntBASIC2.91□□□□□ -1.94
UPK1AO00322 AC110754.1-201ENST00000399740 601 ntBASIC2.91□□□□□ -1.94
UPK1AO00322 PRRC2CP1-201ENST00000404428 159 ntBASIC2.91□□□□□ -1.94
UPK1AO00322 BTBD10P2-201ENST00000404779 676 ntBASIC2.91□□□□□ -1.94
UPK1AO00322 SUMO1-205ENST00000409205 534 ntTSL 2 BASIC2.91□□□□□ -1.94
UPK1AO00322 METTL5-205ENST00000409837 936 ntAPPRIS ALT1 TSL 1 (best) BASIC2.91□□□□□ -1.94
UPK1AO00322 RN7SKP58-201ENST00000411010 305 ntBASIC2.91□□□□□ -1.94
UPK1AO00322 LINC00427-201ENST00000412722 430 ntTSL 2 BASIC2.91□□□□□ -1.94
UPK1AO00322 TEX41-204ENST00000423031 491 ntTSL 4 BASIC2.91□□□□□ -1.94
UPK1AO00322 AL449983.1-201ENST00000430640 414 ntTSL 2 BASIC2.91□□□□□ -1.94
UPK1AO00322 RPS29P6-201ENST00000438196 145 ntBASIC2.91□□□□□ -1.94
UPK1AO00322 AC006028.1-201ENST00000438379 402 ntBASIC2.91□□□□□ -1.94
UPK1AO00322 AC064871.1-201ENST00000444562 427 ntTSL 3 BASIC2.91□□□□□ -1.94
UPK1AO00322 NUTM2A-AS1-209ENST00000447424 571 ntTSL 3 BASIC2.91□□□□□ -1.94
UPK1AO00322 IQCG-204ENST00000453254 1230 ntTSL 2 BASIC2.91□□□□□ -1.94
UPK1AO00322 RPL21P41-201ENST00000459863 264 ntBASIC2.91□□□□□ -1.94
UPK1AO00322 RPL32P34-201ENST00000486380 400 ntBASIC2.91□□□□□ -1.94
UPK1AO00322 PDCD10-216ENST00000492396 814 ntTSL 5 BASIC2.91□□□□□ -1.94
UPK1AO00322 MTND4LP22-201ENST00000508209 276 ntBASIC2.91□□□□□ -1.94
UPK1AO00322 AC074250.1-201ENST00000511117 192 ntBASIC2.91□□□□□ -1.94
UPK1AO00322 RNA5SP385-201ENST00000515947 110 ntBASIC2.91□□□□□ -1.94
UPK1AO00322 SNORA48.9-201ENST00000516419 162 ntBASIC2.91□□□□□ -1.94
UPK1AO00322 AC134043.1-201ENST00000521204 638 ntTSL 3 BASIC2.91□□□□□ -1.94
UPK1AO00322 AC104115.2-201ENST00000523026 687 ntBASIC2.91□□□□□ -1.94
UPK1AO00322 AC090539.1-201ENST00000523907 434 ntTSL 3 BASIC2.91□□□□□ -1.94
UPK1AO00322 CIR1P1-201ENST00000524055 1133 ntBASIC2.91□□□□□ -1.94
UPK1AO00322 MS4A4E-206ENST00000528394 555 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
UPK1AO00322 AC090503.2-201ENST00000551135 981 ntTSL 3 BASIC2.91□□□□□ -1.94
UPK1AO00322 SATB1-AS1-207ENST00000593741 955 ntTSL 5 BASIC2.91□□□□□ -1.94
UPK1AO00322 AC105227.2-201ENST00000615075 605 ntBASIC2.91□□□□□ -1.94
UPK1AO00322 AC084757.4-201ENST00000616350 526 ntBASIC2.91□□□□□ -1.94
UPK1AO00322 SLC35A1-205ENST00000622775 1206 ntTSL 5 BASIC2.91□□□□□ -1.94
UPK1AO00322 AC018692.3-201ENST00000623929 123 ntBASIC2.91□□□□□ -1.94
UPK1AO00322 ADAMTS9-AS1-207ENST00000594810 3609 ntTSL 4 BASIC2.91□□□□□ -1.94
UPK1AO00322 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC2.9□□□□□ -1.94
UPK1AO00322 YWHAZ-211ENST00000457309 3007 ntAPPRIS P1 TSL 2 BASIC2.9□□□□□ -1.94
UPK1AO00322 LINC01021-204ENST00000512067 1610 ntTSL 1 (best) BASIC2.9□□□□□ -1.94
UPK1AO00322 MACC1-202ENST00000400331 9159 ntAPPRIS P1 TSL 2 BASIC2.9□□□□□ -1.95
UPK1AO00322 SNORD51.1-201ENST00000365405 77 ntBASIC2.9□□□□□ -1.95
UPK1AO00322 TATDN1P1-201ENST00000414123 891 ntBASIC2.9□□□□□ -1.95
UPK1AO00322 AC023128.2-201ENST00000420880 1223 ntBASIC2.9□□□□□ -1.95
UPK1AO00322 SLC16A12-AS1-201ENST00000423474 405 ntTSL 3 BASIC2.9□□□□□ -1.95
UPK1AO00322 BBS9-205ENST00000425508 1252 ntTSL 1 (best) BASIC2.9□□□□□ -1.95
UPK1AO00322 AC093151.1-201ENST00000427711 313 ntBASIC2.9□□□□□ -1.95
UPK1AO00322 AL390023.1-201ENST00000428836 262 ntBASIC2.9□□□□□ -1.95
UPK1AO00322 AL360013.2-201ENST00000440104 807 ntTSL 2 BASIC2.9□□□□□ -1.95
UPK1AO00322 CNTN4-AS2-201ENST00000447256 426 ntTSL 3 BASIC2.9□□□□□ -1.95
UPK1AO00322 RPL23AP23-201ENST00000452590 471 ntBASIC2.9□□□□□ -1.95
UPK1AO00322 CABYRP1-201ENST00000465493 1045 ntBASIC2.9□□□□□ -1.95
UPK1AO00322 DENND6A-AS1-201ENST00000470427 364 ntTSL 2 BASIC2.9□□□□□ -1.95
UPK1AO00322 RN7SL20P-201ENST00000488827 297 ntBASIC2.9□□□□□ -1.95
UPK1AO00322 AC010265.1-201ENST00000513509 211 ntBASIC2.9□□□□□ -1.95
UPK1AO00322 LINC02497-201ENST00000515292 507 ntTSL 3 BASIC2.9□□□□□ -1.95
UPK1AO00322 AC113423.1-201ENST00000523279 289 ntTSL 3 BASIC2.9□□□□□ -1.95
UPK1AO00322 VNN2-207ENST00000525289 900 ntTSL 1 (best) BASIC2.9□□□□□ -1.95
UPK1AO00322 AC053481.3-201ENST00000577881 843 ntBASIC2.9□□□□□ -1.95
UPK1AO00322 UBL5P2-201ENST00000583788 219 ntBASIC2.9□□□□□ -1.95
UPK1AO00322 LINC01905-202ENST00000588139 459 ntTSL 3 BASIC2.9□□□□□ -1.95
UPK1AO00322 AC006116.7-201ENST00000590141 756 ntBASIC2.9□□□□□ -1.95
UPK1AO00322 KATNBL1P1-201ENST00000605192 748 ntBASIC2.9□□□□□ -1.95
UPK1AO00322 AF230666.1-202ENST00000608375 870 ntTSL 5 BASIC2.9□□□□□ -1.95
UPK1AO00322 AC069200.1-201ENST00000609511 323 ntBASIC2.9□□□□□ -1.95
UPK1AO00322 AL513314.2-206ENST00000617276 434 ntTSL 5 BASIC2.9□□□□□ -1.95
UPK1AO00322 AC244100.1-202ENST00000621554 382 ntBASIC2.9□□□□□ -1.95
UPK1AO00322 POLK-217ENST00000515295 1438 ntTSL 1 (best) BASIC2.9□□□□□ -1.95
UPK1AO00322 OR6C2-202ENST00000641202 2105 ntAPPRIS P1 BASIC2.9□□□□□ -1.95
UPK1AO00322 ERBIN-212ENST00000508515 4374 ntTSL 5 BASIC2.89□□□□□ -1.95
UPK1AO00322 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
UPK1AO00322 RNF17-204ENST00000339524 2203 ntTSL 2 BASIC2.89□□□□□ -1.95
UPK1AO00322 DDX60L-207ENST00000505890 4568 ntTSL 2 BASIC2.89□□□□□ -1.95
UPK1AO00322 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC2.89□□□□□ -1.95
UPK1AO00322 C2orf76-201ENST00000334816 676 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
UPK1AO00322 RNA5SP189-201ENST00000364920 115 ntBASIC2.89□□□□□ -1.95
UPK1AO00322 FAM107B-204ENST00000378465 1052 ntAPPRIS P1 TSL 2 BASIC2.89□□□□□ -1.95
UPK1AO00322 SNORD15B-201ENST00000384714 146 ntBASIC2.89□□□□□ -1.95
UPK1AO00322 MIR23B-201ENST00000384832 97 ntBASIC2.89□□□□□ -1.95
UPK1AO00322 MIR34B-201ENST00000385076 84 ntBASIC2.89□□□□□ -1.95
UPK1AO00322 SYCP3-202ENST00000392924 845 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
UPK1AO00322 AL355379.1-201ENST00000405542 640 ntBASIC2.89□□□□□ -1.95
UPK1AO00322 UBE2V1P11-201ENST00000411559 285 ntBASIC2.89□□□□□ -1.95
UPK1AO00322 AC099566.1-204ENST00000413825 943 ntTSL 3 BASIC2.89□□□□□ -1.95
UPK1AO00322 AL353678.1-201ENST00000422735 741 ntBASIC2.89□□□□□ -1.95
UPK1AO00322 TRIAP1P1-201ENST00000427062 225 ntBASIC2.89□□□□□ -1.95
UPK1AO00322 MTND4LP7-201ENST00000431728 294 ntBASIC2.89□□□□□ -1.95
UPK1AO00322 MTCO1P43-201ENST00000431831 488 ntBASIC2.89□□□□□ -1.95
UPK1AO00322 AL590399.6-201ENST00000446396 307 ntBASIC2.89□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 148.7 ms