Protein–RNA interactions for Protein: C9J1S8

TRIM49D1, Tripartite motif-containing protein 49D, humanhuman

Predictions only

Length 452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49D1C9J1S8 AL158013.1-202ENST00000419666 520 ntTSL 5 BASIC3.2□□□□□ -1.9
TRIM49D1C9J1S8 AL513365.2-201ENST00000423060 529 ntTSL 2 BASIC3.2□□□□□ -1.9
TRIM49D1C9J1S8 OR2AS1P-201ENST00000427827 319 ntBASIC3.2□□□□□ -1.9
TRIM49D1C9J1S8 TAB3-AS1-201ENST00000428263 245 ntTSL 5 BASIC3.2□□□□□ -1.9
TRIM49D1C9J1S8 RPL39L-202ENST00000433055 749 ntAPPRIS P1 TSL 2 BASIC3.2□□□□□ -1.9
TRIM49D1C9J1S8 FKBP7-205ENST00000434643 666 ntAPPRIS ALT2 TSL 1 (best) BASIC3.2□□□□□ -1.9
TRIM49D1C9J1S8 REG1CP-203ENST00000434852 460 ntTSL 4 BASIC3.2□□□□□ -1.9
TRIM49D1C9J1S8 HSPD1P21-201ENST00000436541 245 ntBASIC3.2□□□□□ -1.9
TRIM49D1C9J1S8 RPL7P29-201ENST00000437151 728 ntBASIC3.2□□□□□ -1.9
TRIM49D1C9J1S8 HSFY3P-201ENST00000444242 1191 ntBASIC3.2□□□□□ -1.9
TRIM49D1C9J1S8 TPTE2P6-202ENST00000445572 1007 ntBASIC3.2□□□□□ -1.9
TRIM49D1C9J1S8 AL606517.1-201ENST00000446914 387 ntBASIC3.2□□□□□ -1.9
TRIM49D1C9J1S8 AC005002.1-201ENST00000447458 540 ntBASIC3.2□□□□□ -1.9
TRIM49D1C9J1S8 EXOSC3P1-201ENST00000448649 500 ntBASIC3.2□□□□□ -1.9
TRIM49D1C9J1S8 UQCRHP3-201ENST00000451503 251 ntBASIC3.2□□□□□ -1.9
TRIM49D1C9J1S8 AL158069.1-201ENST00000454131 455 ntTSL 5 BASIC3.2□□□□□ -1.9
TRIM49D1C9J1S8 GTF2IP12-201ENST00000456547 356 ntBASIC3.2□□□□□ -1.9
TRIM49D1C9J1S8 AL138737.1-201ENST00000456896 1252 ntTSL 5 BASIC3.2□□□□□ -1.9
TRIM49D1C9J1S8 RPL21P13-201ENST00000488305 481 ntBASIC3.2□□□□□ -1.9
TRIM49D1C9J1S8 AC093663.1-201ENST00000497190 394 ntBASIC3.2□□□□□ -1.9
TRIM49D1C9J1S8 LINC01327-201ENST00000498413 535 ntTSL 3 BASIC3.2□□□□□ -1.9
TRIM49D1C9J1S8 GTF2IP9-201ENST00000502460 301 ntBASIC3.2□□□□□ -1.9
TRIM49D1C9J1S8 SUB1-203ENST00000502897 562 ntAPPRIS P1 TSL 4 BASIC3.2□□□□□ -1.9
TRIM49D1C9J1S8 PDLIM1P4-201ENST00000504327 1006 ntBASIC3.2□□□□□ -1.9
TRIM49D1C9J1S8 AC096571.1-202ENST00000506634 735 ntBASIC3.2□□□□□ -1.9
TRIM49D1C9J1S8 LINC02479-201ENST00000508942 630 ntTSL 3 BASIC3.2□□□□□ -1.9
TRIM49D1C9J1S8 TPT1P8-201ENST00000510120 555 ntBASIC3.2□□□□□ -1.9
TRIM49D1C9J1S8 AC108120.2-201ENST00000512973 294 ntBASIC3.2□□□□□ -1.9
TRIM49D1C9J1S8 LINC00534-201ENST00000517400 793 ntTSL 2 BASIC3.2□□□□□ -1.9
TRIM49D1C9J1S8 AC104012.1-201ENST00000517848 719 ntTSL 3 BASIC3.2□□□□□ -1.9
TRIM49D1C9J1S8 NECAB1-205ENST00000522820 811 ntTSL 2 BASIC3.2□□□□□ -1.9
TRIM49D1C9J1S8 AP001646.3-201ENST00000526305 446 ntTSL 2 BASIC3.2□□□□□ -1.9
TRIM49D1C9J1S8 OR5M10-201ENST00000526812 1052 ntAPPRIS P1 BASIC3.2□□□□□ -1.9
TRIM49D1C9J1S8 OR4A2P-201ENST00000527276 913 ntBASIC3.2□□□□□ -1.9
TRIM49D1C9J1S8 MIR100HG-213ENST00000531470 560 ntTSL 4 BASIC3.2□□□□□ -1.9
TRIM49D1C9J1S8 AC139103.1-201ENST00000534696 1030 ntBASIC3.2□□□□□ -1.9
TRIM49D1C9J1S8 MYL12A-202ENST00000536605 899 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
TRIM49D1C9J1S8 AP002993.1-201ENST00000538624 210 ntTSL 5 BASIC3.2□□□□□ -1.9
TRIM49D1C9J1S8 AP003717.3-201ENST00000544832 1180 ntBASIC3.2□□□□□ -1.9
TRIM49D1C9J1S8 NACA-211ENST00000548563 827 ntTSL 5 BASIC3.2□□□□□ -1.9
TRIM49D1C9J1S8 AL355102.1-201ENST00000555383 460 ntTSL 5 BASIC3.2□□□□□ -1.9
TRIM49D1C9J1S8 AC093515.1-201ENST00000567103 445 ntTSL 5 BASIC3.2□□□□□ -1.9
TRIM49D1C9J1S8 MMP2-AS1-202ENST00000569037 553 ntTSL 5 BASIC3.2□□□□□ -1.9
TRIM49D1C9J1S8 AC090618.1-201ENST00000571972 585 ntTSL 2 BASIC3.2□□□□□ -1.9
TRIM49D1C9J1S8 MYL12A-209ENST00000580887 899 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
TRIM49D1C9J1S8 AC002546.2-201ENST00000585537 584 ntTSL 3 BASIC3.2□□□□□ -1.9
TRIM49D1C9J1S8 LINC00649-204ENST00000593977 640 ntTSL 5 BASIC3.2□□□□□ -1.9
TRIM49D1C9J1S8 AC006254.3-201ENST00000603353 884 ntBASIC3.2□□□□□ -1.9
TRIM49D1C9J1S8 RPAP2P1-201ENST00000603626 1168 ntBASIC3.2□□□□□ -1.9
TRIM49D1C9J1S8 AL392112.1-201ENST00000605115 829 ntBASIC3.2□□□□□ -1.9
TRIM49D1C9J1S8 AC105429.2-201ENST00000610567 517 ntBASIC3.2□□□□□ -1.9
TRIM49D1C9J1S8 AC008759.3-201ENST00000613300 508 ntBASIC3.2□□□□□ -1.9
TRIM49D1C9J1S8 FRG1HP-204ENST00000617940 757 ntBASIC3.2□□□□□ -1.9
TRIM49D1C9J1S8 AC022960.3-201ENST00000619794 441 ntBASIC3.2□□□□□ -1.9
TRIM49D1C9J1S8 AC007342.8-201ENST00000623278 678 ntBASIC3.2□□□□□ -1.9
TRIM49D1C9J1S8 AL078595.3-201ENST00000623815 1166 ntBASIC3.2□□□□□ -1.9
TRIM49D1C9J1S8 AC012594.1-272ENST00000625790 710 ntTSL 5 BASIC3.2□□□□□ -1.9
TRIM49D1C9J1S8 AC132825.7-201ENST00000638744 335 ntBASIC3.2□□□□□ -1.9
TRIM49D1C9J1S8 AC006927.2-201ENST00000639256 389 ntBASIC3.2□□□□□ -1.9
TRIM49D1C9J1S8 OR8B1P-202ENST00000641132 1178 ntBASIC3.2□□□□□ -1.9
TRIM49D1C9J1S8 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
TRIM49D1C9J1S8 PRKACB-201ENST00000370680 1914 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
TRIM49D1C9J1S8 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC3.2□□□□□ -1.9
TRIM49D1C9J1S8 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC3.2□□□□□ -1.9
TRIM49D1C9J1S8 PTPN22-207ENST00000528414 3424 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
TRIM49D1C9J1S8 MANEA-201ENST00000358812 4575 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
TRIM49D1C9J1S8 AC106754.1-201ENST00000562632 1513 ntBASIC3.19□□□□□ -1.9
TRIM49D1C9J1S8 PRKAA2-201ENST00000371244 9347 ntAPPRIS P2 TSL 1 (best) BASIC3.19□□□□□ -1.9
TRIM49D1C9J1S8 GUCA1C-202ENST00000393963 900 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
TRIM49D1C9J1S8 RNU6ATAC40P-201ENST00000408580 137 ntBASIC3.19□□□□□ -1.9
TRIM49D1C9J1S8 AC073071.1-201ENST00000412410 388 ntTSL 3 BASIC3.19□□□□□ -1.9
TRIM49D1C9J1S8 BX323014.1-201ENST00000412876 237 ntBASIC3.19□□□□□ -1.9
TRIM49D1C9J1S8 AL359195.1-201ENST00000416657 339 ntTSL 3 BASIC3.19□□□□□ -1.9
TRIM49D1C9J1S8 TAF13P2-201ENST00000416876 286 ntBASIC3.19□□□□□ -1.9
TRIM49D1C9J1S8 P4HA2-AS1-201ENST00000417667 839 ntTSL 3 BASIC3.19□□□□□ -1.9
TRIM49D1C9J1S8 PCDH9-AS2-201ENST00000419371 538 ntTSL 3 BASIC3.19□□□□□ -1.9
TRIM49D1C9J1S8 AP003025.1-201ENST00000421650 149 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
TRIM49D1C9J1S8 AL389915.1-201ENST00000422463 466 ntBASIC3.19□□□□□ -1.9
TRIM49D1C9J1S8 MTCO2P17-201ENST00000424336 677 ntBASIC3.19□□□□□ -1.9
TRIM49D1C9J1S8 ATP6V0E1P4-201ENST00000427294 242 ntBASIC3.19□□□□□ -1.9
TRIM49D1C9J1S8 GCA-203ENST00000429691 824 ntTSL 3 BASIC3.19□□□□□ -1.9
TRIM49D1C9J1S8 GOT2P5-201ENST00000433995 546 ntBASIC3.19□□□□□ -1.9
TRIM49D1C9J1S8 AL157387.1-201ENST00000436077 335 ntTSL 2 BASIC3.19□□□□□ -1.9
TRIM49D1C9J1S8 AL117341.1-201ENST00000437213 373 ntTSL 5 BASIC3.19□□□□□ -1.9
TRIM49D1C9J1S8 AL138799.3-201ENST00000438968 350 ntBASIC3.19□□□□□ -1.9
TRIM49D1C9J1S8 AC015971.1-202ENST00000439077 514 ntTSL 3 BASIC3.19□□□□□ -1.9
TRIM49D1C9J1S8 AC064871.1-201ENST00000444562 427 ntTSL 3 BASIC3.19□□□□□ -1.9
TRIM49D1C9J1S8 RPL34P26-201ENST00000445636 354 ntBASIC3.19□□□□□ -1.9
TRIM49D1C9J1S8 DNAJC19P8-201ENST00000452887 259 ntBASIC3.19□□□□□ -1.9
TRIM49D1C9J1S8 LINC00377-201ENST00000456588 657 ntTSL 5 BASIC3.19□□□□□ -1.9
TRIM49D1C9J1S8 HMGB3P30-201ENST00000457863 606 ntBASIC3.19□□□□□ -1.9
TRIM49D1C9J1S8 RPL23AP62-201ENST00000463396 453 ntBASIC3.19□□□□□ -1.9
TRIM49D1C9J1S8 RPS4XP6-201ENST00000477670 797 ntBASIC3.19□□□□□ -1.9
TRIM49D1C9J1S8 RPL21P103-201ENST00000479921 488 ntBASIC3.19□□□□□ -1.9
TRIM49D1C9J1S8 AC078817.1-201ENST00000492623 435 ntBASIC3.19□□□□□ -1.9
TRIM49D1C9J1S8 RPL5P23-201ENST00000496040 868 ntBASIC3.19□□□□□ -1.9
TRIM49D1C9J1S8 AC108156.1-201ENST00000507849 481 ntTSL 3 BASIC3.19□□□□□ -1.9
TRIM49D1C9J1S8 MTCO1P30-201ENST00000515244 580 ntBASIC3.19□□□□□ -1.9
TRIM49D1C9J1S8 AC104211.1-202ENST00000521307 866 ntTSL 3 BASIC3.19□□□□□ -1.9
TRIM49D1C9J1S8 AP002340.1-201ENST00000529298 285 ntTSL 3 BASIC3.19□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 134.3 ms