Protein–RNA interactions for Protein: A0A087WT01

TRAV27, T-cell receptor alpha variable 27 (Fragment), humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV27A0A087WT01 MIR23B-201ENST00000384832 97 ntBASIC2.49□□□□□ -2.01
TRAV27A0A087WT01 SNORA48.5-201ENST00000391143 135 ntBASIC2.49□□□□□ -2.01
TRAV27A0A087WT01 BPIFC-202ENST00000397450 458 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
TRAV27A0A087WT01 AL024507.1-201ENST00000412741 274 ntBASIC2.49□□□□□ -2.01
TRAV27A0A087WT01 EEF1A1P41-201ENST00000414667 207 ntBASIC2.49□□□□□ -2.01
TRAV27A0A087WT01 AL590705.3-201ENST00000416066 474 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
TRAV27A0A087WT01 B3GALNT1P1-201ENST00000420569 975 ntBASIC2.49□□□□□ -2.01
TRAV27A0A087WT01 LINC00434-201ENST00000423739 419 ntTSL 3 BASIC2.49□□□□□ -2.01
TRAV27A0A087WT01 RPL35AP12-201ENST00000425362 338 ntBASIC2.49□□□□□ -2.01
TRAV27A0A087WT01 LINC00456-201ENST00000453862 692 ntTSL 3 BASIC2.49□□□□□ -2.01
TRAV27A0A087WT01 MTCYBP14-201ENST00000457471 715 ntBASIC2.49□□□□□ -2.01
TRAV27A0A087WT01 AC108860.1-201ENST00000484521 383 ntBASIC2.49□□□□□ -2.01
TRAV27A0A087WT01 NCOR1P1-202ENST00000486162 291 ntBASIC2.49□□□□□ -2.01
TRAV27A0A087WT01 AC093297.1-201ENST00000511712 591 ntTSL 4 BASIC2.49□□□□□ -2.01
TRAV27A0A087WT01 GMPSP1-201ENST00000514075 579 ntBASIC2.49□□□□□ -2.01
TRAV27A0A087WT01 AC105999.1-201ENST00000518722 473 ntTSL 3 BASIC2.49□□□□□ -2.01
TRAV27A0A087WT01 HIGD1AP18-201ENST00000520730 278 ntBASIC2.49□□□□□ -2.01
TRAV27A0A087WT01 AB015752.1-201ENST00000521975 578 ntTSL 5 BASIC2.49□□□□□ -2.01
TRAV27A0A087WT01 LINC01930-201ENST00000602672 870 ntTSL 5 BASIC2.49□□□□□ -2.01
TRAV27A0A087WT01 AC024220.1-201ENST00000603675 484 ntBASIC2.49□□□□□ -2.01
TRAV27A0A087WT01 AC007342.8-201ENST00000623278 678 ntBASIC2.49□□□□□ -2.01
TRAV27A0A087WT01 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC2.48□□□□□ -2.01
TRAV27A0A087WT01 HTR2B-201ENST00000258400 2246 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
TRAV27A0A087WT01 SNORA7.2-201ENST00000364446 145 ntBASIC2.48□□□□□ -2.01
TRAV27A0A087WT01 SNORA51.2-201ENST00000364595 132 ntBASIC2.48□□□□□ -2.01
TRAV27A0A087WT01 EI24P1-201ENST00000416584 867 ntBASIC2.48□□□□□ -2.01
TRAV27A0A087WT01 MTND4P11-201ENST00000417020 1058 ntBASIC2.48□□□□□ -2.01
TRAV27A0A087WT01 TRIM60P3Y-201ENST00000432201 673 ntBASIC2.48□□□□□ -2.01
TRAV27A0A087WT01 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC2.48□□□□□ -2.01
TRAV27A0A087WT01 RPL36AP33-201ENST00000450395 310 ntBASIC2.48□□□□□ -2.01
TRAV27A0A087WT01 SSXP4-201ENST00000451349 245 ntBASIC2.48□□□□□ -2.01
TRAV27A0A087WT01 OR7L1P-201ENST00000456181 380 ntBASIC2.48□□□□□ -2.01
TRAV27A0A087WT01 AC010425.1-201ENST00000511734 554 ntTSL 4 BASIC2.48□□□□□ -2.01
TRAV27A0A087WT01 AC124657.1-201ENST00000527819 429 ntTSL 3 BASIC2.48□□□□□ -2.01
TRAV27A0A087WT01 AC090092.1-201ENST00000530576 510 ntTSL 2 BASIC2.48□□□□□ -2.01
TRAV27A0A087WT01 AP000857.2-201ENST00000532123 419 ntTSL 3 BASIC2.48□□□□□ -2.01
TRAV27A0A087WT01 ELOCP31-201ENST00000540463 467 ntBASIC2.48□□□□□ -2.01
TRAV27A0A087WT01 AC046158.1-201ENST00000563408 719 ntTSL 3 BASIC2.48□□□□□ -2.01
TRAV27A0A087WT01 CASC16-202ENST00000563844 610 ntTSL 3 BASIC2.48□□□□□ -2.01
TRAV27A0A087WT01 LINC02185-202ENST00000576797 568 ntTSL 3 BASIC2.48□□□□□ -2.01
TRAV27A0A087WT01 AC090409.2-202ENST00000585706 604 ntTSL 5 BASIC2.48□□□□□ -2.01
TRAV27A0A087WT01 MIR92B-201ENST00000607575 96 ntBASIC2.48□□□□□ -2.01
TRAV27A0A087WT01 AC112211.1-201ENST00000607832 305 ntTSL 3 BASIC2.48□□□□□ -2.01
TRAV27A0A087WT01 AC002076.2-201ENST00000617362 122 ntBASIC2.48□□□□□ -2.01
TRAV27A0A087WT01 AC073348.1-201ENST00000623002 331 ntBASIC2.48□□□□□ -2.01
TRAV27A0A087WT01 CR381653.2-201ENST00000624041 768 ntBASIC2.48□□□□□ -2.01
TRAV27A0A087WT01 AC004777.1-201ENST00000624317 287 ntBASIC2.48□□□□□ -2.01
TRAV27A0A087WT01 MAPK6PS3-201ENST00000403865 2162 ntBASIC2.48□□□□□ -2.01
TRAV27A0A087WT01 CXADR-205ENST00000400169 1445 ntAPPRIS ALT2 TSL 5 BASIC2.48□□□□□ -2.01
TRAV27A0A087WT01 SYTL2-230ENST00000634661 6672 ntTSL 5 BASIC2.48□□□□□ -2.01
TRAV27A0A087WT01 LINC00560-201ENST00000564593 1599 ntTSL 1 (best) BASIC2.48□□□□□ -2.01
TRAV27A0A087WT01 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC2.48□□□□□ -2.01
TRAV27A0A087WT01 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC2.48□□□□□ -2.01
TRAV27A0A087WT01 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC2.48□□□□□ -2.01
TRAV27A0A087WT01 FTX-214ENST00000638437 12267 ntTSL 5 BASIC2.48□□□□□ -2.01
TRAV27A0A087WT01 KIAA0825-203ENST00000513200 4942 ntTSL 5 BASIC2.47□□□□□ -2.01
TRAV27A0A087WT01 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC2.47□□□□□ -2.01
TRAV27A0A087WT01 MTND5P7-201ENST00000413558 1798 ntBASIC2.47□□□□□ -2.01
TRAV27A0A087WT01 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC2.47□□□□□ -2.01
TRAV27A0A087WT01 KRTAP27-1-201ENST00000382835 682 ntAPPRIS P1 BASIC2.47□□□□□ -2.01
TRAV27A0A087WT01 SNORA18.3-201ENST00000384122 132 ntBASIC2.47□□□□□ -2.01
TRAV27A0A087WT01 AL354719.1-201ENST00000406535 843 ntBASIC2.47□□□□□ -2.01
TRAV27A0A087WT01 AC009468.1-201ENST00000412800 437 ntTSL 3 BASIC2.47□□□□□ -2.01
TRAV27A0A087WT01 AL592148.1-201ENST00000413568 445 ntBASIC2.47□□□□□ -2.01
TRAV27A0A087WT01 AL031736.2-201ENST00000426573 787 ntBASIC2.47□□□□□ -2.01
TRAV27A0A087WT01 AL139132.1-201ENST00000431587 344 ntBASIC2.47□□□□□ -2.01
TRAV27A0A087WT01 AL606490.7-201ENST00000433136 191 ntBASIC2.47□□□□□ -2.01
TRAV27A0A087WT01 RAB6C-AS1-202ENST00000433431 123 ntBASIC2.47□□□□□ -2.01
TRAV27A0A087WT01 RPL23AP74-201ENST00000437246 471 ntBASIC2.47□□□□□ -2.01
TRAV27A0A087WT01 CCRL1P1-201ENST00000449542 1053 ntBASIC2.47□□□□□ -2.01
TRAV27A0A087WT01 AC093392.2-201ENST00000450682 337 ntBASIC2.47□□□□□ -2.01
TRAV27A0A087WT01 OR6C72P-201ENST00000451403 892 ntBASIC2.47□□□□□ -2.01
TRAV27A0A087WT01 GSTA11P-201ENST00000452866 669 ntBASIC2.47□□□□□ -2.01
TRAV27A0A087WT01 RNU7-27P-201ENST00000459281 62 ntBASIC2.47□□□□□ -2.01
TRAV27A0A087WT01 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC2.47□□□□□ -2.01
TRAV27A0A087WT01 RPS27AP9-201ENST00000477681 438 ntBASIC2.47□□□□□ -2.01
TRAV27A0A087WT01 AC020651.1-201ENST00000490324 360 ntTSL 3 BASIC2.47□□□□□ -2.01
TRAV27A0A087WT01 LINC02213-202ENST00000506021 774 ntTSL 2 BASIC2.47□□□□□ -2.01
TRAV27A0A087WT01 AC025244.2-201ENST00000509215 422 ntTSL 3 BASIC2.47□□□□□ -2.01
TRAV27A0A087WT01 RNU6-319P-201ENST00000516025 108 ntBASIC2.47□□□□□ -2.01
TRAV27A0A087WT01 RN7SKP57-201ENST00000517248 293 ntBASIC2.47□□□□□ -2.01
TRAV27A0A087WT01 AC079098.1-202ENST00000523150 573 ntTSL 5 BASIC2.47□□□□□ -2.01
TRAV27A0A087WT01 OR6C73P-201ENST00000546432 358 ntBASIC2.47□□□□□ -2.01
TRAV27A0A087WT01 AL355836.1-201ENST00000555951 870 ntBASIC2.47□□□□□ -2.01
TRAV27A0A087WT01 AC034268.2-201ENST00000571784 482 ntBASIC2.47□□□□□ -2.01
TRAV27A0A087WT01 MTCO3P24-201ENST00000572729 782 ntBASIC2.47□□□□□ -2.01
TRAV27A0A087WT01 LINC01539-206ENST00000593282 678 ntTSL 4 BASIC2.47□□□□□ -2.01
TRAV27A0A087WT01 AC004542.2-201ENST00000602847 546 ntTSL 3 BASIC2.47□□□□□ -2.01
TRAV27A0A087WT01 AC012468.1-201ENST00000604888 430 ntBASIC2.47□□□□□ -2.01
TRAV27A0A087WT01 AC006023.2-201ENST00000609916 167 ntBASIC2.47□□□□□ -2.01
TRAV27A0A087WT01 C1orf185-204ENST00000612209 899 ntAPPRIS ALT2 TSL 2 BASIC2.47□□□□□ -2.01
TRAV27A0A087WT01 C8orf89-203ENST00000625134 507 ntAPPRIS ALT2 TSL 1 (best) BASIC2.47□□□□□ -2.01
TRAV27A0A087WT01 AC092442.1-201ENST00000636216 138 ntAPPRIS P1 TSL 5 BASIC2.47□□□□□ -2.01
TRAV27A0A087WT01 AL355596.1-201ENST00000565399 3996 ntBASIC2.47□□□□□ -2.01
TRAV27A0A087WT01 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC2.47□□□□□ -2.01
TRAV27A0A087WT01 PRKG1-205ENST00000401604 5922 ntTSL 5 BASIC2.47□□□□□ -2.01
TRAV27A0A087WT01 XKR3-201ENST00000331428 1690 ntAPPRIS P1 TSL 1 (best) BASIC2.47□□□□□ -2.01
TRAV27A0A087WT01 AL645568.2-201ENST00000432815 1337 ntBASIC2.46□□□□□ -2.02
TRAV27A0A087WT01 FOXP2-210ENST00000403559 6415 ntTSL 2 BASIC2.46□□□□□ -2.02
TRAV27A0A087WT01 TSHB-201ENST00000256592 537 ntAPPRIS P1 TSL 5 BASIC2.46□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 129 ms