Protein–RNA interactions for Protein: Q9Y6V7

DDX49, Probable ATP-dependent RNA helicase DDX49, humanhuman

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX49Q9Y6V7 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC23.03■■□□□ 1.28
DDX49Q9Y6V7 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
DDX49Q9Y6V7 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
DDX49Q9Y6V7 TP73-202ENST00000354437 2140 ntTSL 5 BASIC23.03■■□□□ 1.28
DDX49Q9Y6V7 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
DDX49Q9Y6V7 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
DDX49Q9Y6V7 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC23.03■■□□□ 1.28
DDX49Q9Y6V7 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
DDX49Q9Y6V7 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
DDX49Q9Y6V7 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC23.03■■□□□ 1.28
DDX49Q9Y6V7 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
DDX49Q9Y6V7 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
DDX49Q9Y6V7 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC23.03■■□□□ 1.28
DDX49Q9Y6V7 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
DDX49Q9Y6V7 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC23.03■■□□□ 1.28
DDX49Q9Y6V7 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC23.03■■□□□ 1.28
DDX49Q9Y6V7 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC23.03■■□□□ 1.28
DDX49Q9Y6V7 HES2-206ENST00000489730 730 ntTSL 2 BASIC23.03■■□□□ 1.28
DDX49Q9Y6V7 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC23.03■■□□□ 1.28
DDX49Q9Y6V7 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC23.03■■□□□ 1.28
DDX49Q9Y6V7 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC23.03■■□□□ 1.28
DDX49Q9Y6V7 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC23.03■■□□□ 1.28
DDX49Q9Y6V7 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
DDX49Q9Y6V7 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC23.03■■□□□ 1.28
DDX49Q9Y6V7 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
DDX49Q9Y6V7 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC23.03■■□□□ 1.28
DDX49Q9Y6V7 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC23.03■■□□□ 1.28
DDX49Q9Y6V7 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC23.03■■□□□ 1.28
DDX49Q9Y6V7 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
DDX49Q9Y6V7 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
DDX49Q9Y6V7 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC23.02■■□□□ 1.28
DDX49Q9Y6V7 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC23.02■■□□□ 1.28
DDX49Q9Y6V7 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC23.02■■□□□ 1.28
DDX49Q9Y6V7 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
DDX49Q9Y6V7 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
DDX49Q9Y6V7 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
DDX49Q9Y6V7 MDFI-202ENST00000373050 809 ntTSL 2 BASIC23.02■■□□□ 1.28
DDX49Q9Y6V7 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC23.02■■□□□ 1.28
DDX49Q9Y6V7 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC23.02■■□□□ 1.28
DDX49Q9Y6V7 TSPY7P-201ENST00000431358 1114 ntBASIC23.02■■□□□ 1.28
DDX49Q9Y6V7 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC23.02■■□□□ 1.28
DDX49Q9Y6V7 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
DDX49Q9Y6V7 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC23.02■■□□□ 1.28
DDX49Q9Y6V7 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC23.02■■□□□ 1.28
DDX49Q9Y6V7 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC23.02■■□□□ 1.28
DDX49Q9Y6V7 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC23.02■■□□□ 1.28
DDX49Q9Y6V7 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
DDX49Q9Y6V7 ADK-206ENST00000541550 2222 ntTSL 2 BASIC23.02■■□□□ 1.28
DDX49Q9Y6V7 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC23.02■■□□□ 1.28
DDX49Q9Y6V7 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC23.02■■□□□ 1.28
DDX49Q9Y6V7 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC23.02■■□□□ 1.28
DDX49Q9Y6V7 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
DDX49Q9Y6V7 LINC01465-201ENST00000408887 1940 ntBASIC23.02■■□□□ 1.28
DDX49Q9Y6V7 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC23.01■■□□□ 1.27
DDX49Q9Y6V7 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC23.01■■□□□ 1.27
DDX49Q9Y6V7 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
DDX49Q9Y6V7 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
DDX49Q9Y6V7 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC23.01■■□□□ 1.27
DDX49Q9Y6V7 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC23.01■■□□□ 1.27
DDX49Q9Y6V7 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC23.01■■□□□ 1.27
DDX49Q9Y6V7 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
DDX49Q9Y6V7 KRASP1-201ENST00000407852 552 ntBASIC23.01■■□□□ 1.27
DDX49Q9Y6V7 PGM5P4-201ENST00000421970 445 ntBASIC23.01■■□□□ 1.27
DDX49Q9Y6V7 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
DDX49Q9Y6V7 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC23.01■■□□□ 1.27
DDX49Q9Y6V7 TSPY15P-201ENST00000457163 923 ntBASIC23.01■■□□□ 1.27
DDX49Q9Y6V7 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC23.01■■□□□ 1.27
DDX49Q9Y6V7 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC23.01■■□□□ 1.27
DDX49Q9Y6V7 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC23.01■■□□□ 1.27
DDX49Q9Y6V7 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC23.01■■□□□ 1.27
DDX49Q9Y6V7 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
DDX49Q9Y6V7 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
DDX49Q9Y6V7 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
DDX49Q9Y6V7 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC23.01■■□□□ 1.27
DDX49Q9Y6V7 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC23.01■■□□□ 1.27
DDX49Q9Y6V7 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC23.01■■□□□ 1.27
DDX49Q9Y6V7 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC23.01■■□□□ 1.27
DDX49Q9Y6V7 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC23.01■■□□□ 1.27
DDX49Q9Y6V7 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC23.01■■□□□ 1.27
DDX49Q9Y6V7 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC23.01■■□□□ 1.27
DDX49Q9Y6V7 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC23.01■■□□□ 1.27
DDX49Q9Y6V7 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC23.01■■□□□ 1.27
DDX49Q9Y6V7 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
DDX49Q9Y6V7 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC23■■□□□ 1.27
DDX49Q9Y6V7 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
DDX49Q9Y6V7 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC23■■□□□ 1.27
DDX49Q9Y6V7 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC23■■□□□ 1.27
DDX49Q9Y6V7 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC23■■□□□ 1.27
DDX49Q9Y6V7 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC23■■□□□ 1.27
DDX49Q9Y6V7 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC23■■□□□ 1.27
DDX49Q9Y6V7 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
DDX49Q9Y6V7 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC23■■□□□ 1.27
DDX49Q9Y6V7 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC23■■□□□ 1.27
DDX49Q9Y6V7 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC23■■□□□ 1.27
DDX49Q9Y6V7 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC23■■□□□ 1.27
DDX49Q9Y6V7 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
DDX49Q9Y6V7 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
DDX49Q9Y6V7 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC23■■□□□ 1.27
DDX49Q9Y6V7 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC23■■□□□ 1.27
DDX49Q9Y6V7 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
Retrieved 100 of 98,524 protein–RNA pairs in 36.1 ms