Protein–RNA interactions for Protein: Q9UBU9

NXF1, Nuclear RNA export factor 1, humanhuman

Known RBP Predictions only

Length 619 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1Q9UBU9 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC20.67■□□□□ 0.9
NXF1Q9UBU9 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC20.67■□□□□ 0.9
NXF1Q9UBU9 PTPA-216ENST00000432651 857 ntTSL 2 BASIC20.67■□□□□ 0.9
NXF1Q9UBU9 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC20.67■□□□□ 0.9
NXF1Q9UBU9 AC026271.3-201ENST00000571884 352 ntBASIC20.67■□□□□ 0.9
NXF1Q9UBU9 REXO1L10P-201ENST00000615707 1290 ntBASIC20.67■□□□□ 0.9
NXF1Q9UBU9 MIR6786-201ENST00000616843 113 ntBASIC20.67■□□□□ 0.9
NXF1Q9UBU9 REXO1L12P-201ENST00000622156 912 ntBASIC20.67■□□□□ 0.9
NXF1Q9UBU9 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC20.67■□□□□ 0.9
NXF1Q9UBU9 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC20.67■□□□□ 0.9
NXF1Q9UBU9 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
NXF1Q9UBU9 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
NXF1Q9UBU9 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
NXF1Q9UBU9 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC20.67■□□□□ 0.9
NXF1Q9UBU9 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
NXF1Q9UBU9 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
NXF1Q9UBU9 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC20.67■□□□□ 0.9
NXF1Q9UBU9 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
NXF1Q9UBU9 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC20.66■□□□□ 0.9
NXF1Q9UBU9 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
NXF1Q9UBU9 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
NXF1Q9UBU9 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
NXF1Q9UBU9 AC116562.4-201ENST00000641316 2276 ntBASIC20.66■□□□□ 0.9
NXF1Q9UBU9 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
NXF1Q9UBU9 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC20.66■□□□□ 0.9
NXF1Q9UBU9 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
NXF1Q9UBU9 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
NXF1Q9UBU9 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
NXF1Q9UBU9 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC20.66■□□□□ 0.9
NXF1Q9UBU9 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
NXF1Q9UBU9 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC20.66■□□□□ 0.9
NXF1Q9UBU9 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC20.66■□□□□ 0.9
NXF1Q9UBU9 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
NXF1Q9UBU9 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC20.66■□□□□ 0.9
NXF1Q9UBU9 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
NXF1Q9UBU9 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
NXF1Q9UBU9 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
NXF1Q9UBU9 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
NXF1Q9UBU9 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
NXF1Q9UBU9 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
NXF1Q9UBU9 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC20.66■□□□□ 0.9
NXF1Q9UBU9 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC20.66■□□□□ 0.9
NXF1Q9UBU9 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC20.66■□□□□ 0.9
NXF1Q9UBU9 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
NXF1Q9UBU9 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC20.65■□□□□ 0.9
NXF1Q9UBU9 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
NXF1Q9UBU9 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
NXF1Q9UBU9 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC20.65■□□□□ 0.9
NXF1Q9UBU9 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC20.65■□□□□ 0.9
NXF1Q9UBU9 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
NXF1Q9UBU9 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
NXF1Q9UBU9 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC20.65■□□□□ 0.9
NXF1Q9UBU9 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
NXF1Q9UBU9 FSCN1P1-201ENST00000568912 1481 ntBASIC20.65■□□□□ 0.9
NXF1Q9UBU9 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
NXF1Q9UBU9 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
NXF1Q9UBU9 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
NXF1Q9UBU9 AC004951.3-201ENST00000418645 1148 ntBASIC20.65■□□□□ 0.9
NXF1Q9UBU9 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC20.65■□□□□ 0.9
NXF1Q9UBU9 B3GAT3P1-201ENST00000471720 806 ntBASIC20.65■□□□□ 0.9
NXF1Q9UBU9 AC116562.2-201ENST00000507042 360 ntBASIC20.65■□□□□ 0.9
NXF1Q9UBU9 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC20.65■□□□□ 0.9
NXF1Q9UBU9 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC20.65■□□□□ 0.9
NXF1Q9UBU9 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC20.65■□□□□ 0.9
NXF1Q9UBU9 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC20.65■□□□□ 0.9
NXF1Q9UBU9 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC20.65■□□□□ 0.9
NXF1Q9UBU9 AC011298.2-201ENST00000617989 482 ntBASIC20.65■□□□□ 0.9
NXF1Q9UBU9 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
NXF1Q9UBU9 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
NXF1Q9UBU9 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
NXF1Q9UBU9 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
NXF1Q9UBU9 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
NXF1Q9UBU9 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC20.64■□□□□ 0.9
NXF1Q9UBU9 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
NXF1Q9UBU9 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC20.64■□□□□ 0.9
NXF1Q9UBU9 KRT8P41-201ENST00000533985 1514 ntBASIC20.64■□□□□ 0.9
NXF1Q9UBU9 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.9
NXF1Q9UBU9 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
NXF1Q9UBU9 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC20.64■□□□□ 0.89
NXF1Q9UBU9 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC20.64■□□□□ 0.89
NXF1Q9UBU9 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC20.64■□□□□ 0.89
NXF1Q9UBU9 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC20.64■□□□□ 0.89
NXF1Q9UBU9 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
NXF1Q9UBU9 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
NXF1Q9UBU9 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC20.64■□□□□ 0.89
NXF1Q9UBU9 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC20.64■□□□□ 0.89
NXF1Q9UBU9 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC20.64■□□□□ 0.89
NXF1Q9UBU9 MESTP1-201ENST00000404287 994 ntBASIC20.64■□□□□ 0.89
NXF1Q9UBU9 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC20.64■□□□□ 0.89
NXF1Q9UBU9 TSPY15P-201ENST00000457163 923 ntBASIC20.64■□□□□ 0.89
NXF1Q9UBU9 AC008040.2-201ENST00000461049 708 ntBASIC20.64■□□□□ 0.89
NXF1Q9UBU9 AL355075.4-201ENST00000554988 638 ntBASIC20.64■□□□□ 0.89
NXF1Q9UBU9 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC20.64■□□□□ 0.89
NXF1Q9UBU9 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
NXF1Q9UBU9 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC20.64■□□□□ 0.89
NXF1Q9UBU9 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
NXF1Q9UBU9 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
NXF1Q9UBU9 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC20.63■□□□□ 0.89
NXF1Q9UBU9 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
NXF1Q9UBU9 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC20.63■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 24.7 ms