Protein–RNA interactions for Protein: Q9NZC9

SMARCAL1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1, humanhuman

Predictions only

Length 954 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1Q9NZC9 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC20.25■□□□□ 0.83
SMARCAL1Q9NZC9 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC20.25■□□□□ 0.83
SMARCAL1Q9NZC9 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC20.25■□□□□ 0.83
SMARCAL1Q9NZC9 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC20.25■□□□□ 0.83
SMARCAL1Q9NZC9 RAP2CP1-201ENST00000605103 478 ntBASIC20.25■□□□□ 0.83
SMARCAL1Q9NZC9 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC20.25■□□□□ 0.83
SMARCAL1Q9NZC9 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC20.25■□□□□ 0.83
SMARCAL1Q9NZC9 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC20.25■□□□□ 0.83
SMARCAL1Q9NZC9 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
SMARCAL1Q9NZC9 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
SMARCAL1Q9NZC9 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
SMARCAL1Q9NZC9 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC20.25■□□□□ 0.83
SMARCAL1Q9NZC9 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
SMARCAL1Q9NZC9 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
SMARCAL1Q9NZC9 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC20.24■□□□□ 0.83
SMARCAL1Q9NZC9 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
SMARCAL1Q9NZC9 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC20.24■□□□□ 0.83
SMARCAL1Q9NZC9 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
SMARCAL1Q9NZC9 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
SMARCAL1Q9NZC9 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
SMARCAL1Q9NZC9 PXK-206ENST00000463280 2825 ntTSL 2 BASIC20.24■□□□□ 0.83
SMARCAL1Q9NZC9 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC20.24■□□□□ 0.83
SMARCAL1Q9NZC9 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
SMARCAL1Q9NZC9 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
SMARCAL1Q9NZC9 AC104417.2-201ENST00000562989 1793 ntBASIC20.23■□□□□ 0.83
SMARCAL1Q9NZC9 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC20.23■□□□□ 0.83
SMARCAL1Q9NZC9 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC20.23■□□□□ 0.83
SMARCAL1Q9NZC9 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
SMARCAL1Q9NZC9 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC20.23■□□□□ 0.83
SMARCAL1Q9NZC9 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
SMARCAL1Q9NZC9 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC20.23■□□□□ 0.83
SMARCAL1Q9NZC9 MIR663A-201ENST00000385250 93 ntBASIC20.23■□□□□ 0.83
SMARCAL1Q9NZC9 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
SMARCAL1Q9NZC9 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
SMARCAL1Q9NZC9 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC20.23■□□□□ 0.83
SMARCAL1Q9NZC9 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
SMARCAL1Q9NZC9 OR10C1-204ENST00000622521 1039 ntBASIC20.23■□□□□ 0.83
SMARCAL1Q9NZC9 AC093525.10-201ENST00000625130 1569 ntBASIC20.23■□□□□ 0.83
SMARCAL1Q9NZC9 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC20.23■□□□□ 0.83
SMARCAL1Q9NZC9 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
SMARCAL1Q9NZC9 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
SMARCAL1Q9NZC9 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC20.23■□□□□ 0.83
SMARCAL1Q9NZC9 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
SMARCAL1Q9NZC9 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC20.23■□□□□ 0.83
SMARCAL1Q9NZC9 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
SMARCAL1Q9NZC9 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
SMARCAL1Q9NZC9 IRX1P1-201ENST00000438849 1838 ntBASIC20.23■□□□□ 0.83
SMARCAL1Q9NZC9 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC20.22■□□□□ 0.83
SMARCAL1Q9NZC9 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
SMARCAL1Q9NZC9 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
SMARCAL1Q9NZC9 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
SMARCAL1Q9NZC9 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
SMARCAL1Q9NZC9 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
SMARCAL1Q9NZC9 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
SMARCAL1Q9NZC9 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC20.22■□□□□ 0.83
SMARCAL1Q9NZC9 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC20.22■□□□□ 0.83
SMARCAL1Q9NZC9 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC20.22■□□□□ 0.83
SMARCAL1Q9NZC9 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC20.22■□□□□ 0.83
SMARCAL1Q9NZC9 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
SMARCAL1Q9NZC9 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
SMARCAL1Q9NZC9 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC20.22■□□□□ 0.83
SMARCAL1Q9NZC9 CROCCP5-201ENST00000436658 830 ntBASIC20.22■□□□□ 0.83
SMARCAL1Q9NZC9 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
SMARCAL1Q9NZC9 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC20.22■□□□□ 0.83
SMARCAL1Q9NZC9 HES2-206ENST00000489730 730 ntTSL 2 BASIC20.22■□□□□ 0.83
SMARCAL1Q9NZC9 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
SMARCAL1Q9NZC9 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC20.22■□□□□ 0.83
SMARCAL1Q9NZC9 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC20.22■□□□□ 0.83
SMARCAL1Q9NZC9 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
SMARCAL1Q9NZC9 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
SMARCAL1Q9NZC9 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
SMARCAL1Q9NZC9 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
SMARCAL1Q9NZC9 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
SMARCAL1Q9NZC9 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
SMARCAL1Q9NZC9 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
SMARCAL1Q9NZC9 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
SMARCAL1Q9NZC9 NXN-202ENST00000537628 1340 ntTSL 3 BASIC20.22■□□□□ 0.83
SMARCAL1Q9NZC9 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC20.22■□□□□ 0.83
SMARCAL1Q9NZC9 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
SMARCAL1Q9NZC9 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
SMARCAL1Q9NZC9 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
SMARCAL1Q9NZC9 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
SMARCAL1Q9NZC9 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC20.21■□□□□ 0.83
SMARCAL1Q9NZC9 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
SMARCAL1Q9NZC9 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
SMARCAL1Q9NZC9 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
SMARCAL1Q9NZC9 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
SMARCAL1Q9NZC9 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
SMARCAL1Q9NZC9 AL050303.2-201ENST00000619798 666 ntBASIC20.21■□□□□ 0.83
SMARCAL1Q9NZC9 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
SMARCAL1Q9NZC9 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC20.21■□□□□ 0.83
SMARCAL1Q9NZC9 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
SMARCAL1Q9NZC9 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC20.21■□□□□ 0.83
SMARCAL1Q9NZC9 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
SMARCAL1Q9NZC9 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC20.21■□□□□ 0.83
SMARCAL1Q9NZC9 BICD1-207ENST00000551848 1962 ntBASIC20.21■□□□□ 0.83
SMARCAL1Q9NZC9 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC20.21■□□□□ 0.83
SMARCAL1Q9NZC9 Z98044.1-201ENST00000632503 1764 ntBASIC20.21■□□□□ 0.83
SMARCAL1Q9NZC9 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
SMARCAL1Q9NZC9 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 29.3 ms