Protein–RNA interactions for Protein: Q9NUG4

CCM2L, Cerebral cavernous malformations 2 protein-like, humanhuman

Predicted RBP Predictions only

Length 571 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2LQ9NUG4 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CCM2LQ9NUG4 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
CCM2LQ9NUG4 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
CCM2LQ9NUG4 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC18.27■□□□□ 0.52
CCM2LQ9NUG4 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CCM2LQ9NUG4 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
CCM2LQ9NUG4 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC18.27■□□□□ 0.52
CCM2LQ9NUG4 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
CCM2LQ9NUG4 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
CCM2LQ9NUG4 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CCM2LQ9NUG4 ESRRAP1-201ENST00000400596 1257 ntBASIC18.27■□□□□ 0.52
CCM2LQ9NUG4 BET1L-204ENST00000410108 637 ntTSL 3 BASIC18.27■□□□□ 0.52
CCM2LQ9NUG4 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC18.27■□□□□ 0.52
CCM2LQ9NUG4 RPS2P4-201ENST00000476944 856 ntBASIC18.27■□□□□ 0.52
CCM2LQ9NUG4 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC18.27■□□□□ 0.52
CCM2LQ9NUG4 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC18.27■□□□□ 0.52
CCM2LQ9NUG4 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
CCM2LQ9NUG4 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC18.27■□□□□ 0.52
CCM2LQ9NUG4 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
CCM2LQ9NUG4 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
CCM2LQ9NUG4 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CCM2LQ9NUG4 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
CCM2LQ9NUG4 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
CCM2LQ9NUG4 USP39-202ENST00000409025 1946 ntTSL 5 BASIC18.27■□□□□ 0.51
CCM2LQ9NUG4 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
CCM2LQ9NUG4 AC020916.1-201ENST00000587762 1774 ntBASIC18.27■□□□□ 0.51
CCM2LQ9NUG4 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
CCM2LQ9NUG4 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
CCM2LQ9NUG4 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
CCM2LQ9NUG4 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.51
CCM2LQ9NUG4 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC18.26■□□□□ 0.51
CCM2LQ9NUG4 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
CCM2LQ9NUG4 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
CCM2LQ9NUG4 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
CCM2LQ9NUG4 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC18.26■□□□□ 0.51
CCM2LQ9NUG4 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CCM2LQ9NUG4 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CCM2LQ9NUG4 FP475955.4-201ENST00000623131 1990 ntBASIC18.26■□□□□ 0.51
CCM2LQ9NUG4 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CCM2LQ9NUG4 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CCM2LQ9NUG4 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CCM2LQ9NUG4 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC18.26■□□□□ 0.51
CCM2LQ9NUG4 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CCM2LQ9NUG4 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC18.26■□□□□ 0.51
CCM2LQ9NUG4 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC18.26■□□□□ 0.51
CCM2LQ9NUG4 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
CCM2LQ9NUG4 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC18.26■□□□□ 0.51
CCM2LQ9NUG4 CYP2T1P-201ENST00000432607 1285 ntBASIC18.26■□□□□ 0.51
CCM2LQ9NUG4 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CCM2LQ9NUG4 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC18.26■□□□□ 0.51
CCM2LQ9NUG4 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CCM2LQ9NUG4 AC142381.4-202ENST00000563973 229 ntBASIC18.26■□□□□ 0.51
CCM2LQ9NUG4 MARS-234ENST00000630571 216 ntTSL 5 BASIC18.26■□□□□ 0.51
CCM2LQ9NUG4 MARS-235ENST00000630803 183 ntTSL 3 BASIC18.26■□□□□ 0.51
CCM2LQ9NUG4 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
CCM2LQ9NUG4 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CCM2LQ9NUG4 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
CCM2LQ9NUG4 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
CCM2LQ9NUG4 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
CCM2LQ9NUG4 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CCM2LQ9NUG4 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CCM2LQ9NUG4 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CCM2LQ9NUG4 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
CCM2LQ9NUG4 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC18.26■□□□□ 0.51
CCM2LQ9NUG4 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CCM2LQ9NUG4 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
CCM2LQ9NUG4 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
CCM2LQ9NUG4 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CCM2LQ9NUG4 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
CCM2LQ9NUG4 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
CCM2LQ9NUG4 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CCM2LQ9NUG4 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CCM2LQ9NUG4 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
CCM2LQ9NUG4 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
CCM2LQ9NUG4 AC068338.2-201ENST00000563278 1430 ntBASIC18.25■□□□□ 0.51
CCM2LQ9NUG4 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CCM2LQ9NUG4 LTB4R2-202ENST00000528054 3092 ntBASIC18.25■□□□□ 0.51
CCM2LQ9NUG4 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CCM2LQ9NUG4 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CCM2LQ9NUG4 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CCM2LQ9NUG4 AC020763.4-201ENST00000623414 4170 ntBASIC18.25■□□□□ 0.51
CCM2LQ9NUG4 BAALC-201ENST00000297574 801 ntTSL 3 BASIC18.25■□□□□ 0.51
CCM2LQ9NUG4 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC18.25■□□□□ 0.51
CCM2LQ9NUG4 HLA-G-202ENST00000376815 851 ntBASIC18.25■□□□□ 0.51
CCM2LQ9NUG4 HLA-G-203ENST00000376818 1127 ntBASIC18.25■□□□□ 0.51
CCM2LQ9NUG4 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CCM2LQ9NUG4 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC18.25■□□□□ 0.51
CCM2LQ9NUG4 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
CCM2LQ9NUG4 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC18.25■□□□□ 0.51
CCM2LQ9NUG4 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC18.25■□□□□ 0.51
CCM2LQ9NUG4 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CCM2LQ9NUG4 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
CCM2LQ9NUG4 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC18.25■□□□□ 0.51
CCM2LQ9NUG4 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC18.25■□□□□ 0.51
CCM2LQ9NUG4 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC18.25■□□□□ 0.51
CCM2LQ9NUG4 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
CCM2LQ9NUG4 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
CCM2LQ9NUG4 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC18.24■□□□□ 0.51
CCM2LQ9NUG4 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
CCM2LQ9NUG4 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC18.24■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 41.5 ms