Protein–RNA interactions for Protein: Q9HAZ1

CLK4, Dual specificity protein kinase CLK4, humanhuman

Known RBP Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4Q9HAZ1 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CLK4Q9HAZ1 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CLK4Q9HAZ1 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CLK4Q9HAZ1 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
CLK4Q9HAZ1 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
CLK4Q9HAZ1 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CLK4Q9HAZ1 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CLK4Q9HAZ1 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
CLK4Q9HAZ1 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
CLK4Q9HAZ1 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
CLK4Q9HAZ1 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CLK4Q9HAZ1 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CLK4Q9HAZ1 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CLK4Q9HAZ1 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CLK4Q9HAZ1 PRORSD1P-201ENST00000295112 541 ntBASIC18.67■□□□□ 0.58
CLK4Q9HAZ1 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CLK4Q9HAZ1 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC18.67■□□□□ 0.58
CLK4Q9HAZ1 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC18.67■□□□□ 0.58
CLK4Q9HAZ1 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC18.67■□□□□ 0.58
CLK4Q9HAZ1 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC18.67■□□□□ 0.58
CLK4Q9HAZ1 PNN-205ENST00000556530 601 ntTSL 2 BASIC18.67■□□□□ 0.58
CLK4Q9HAZ1 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC18.67■□□□□ 0.58
CLK4Q9HAZ1 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC18.67■□□□□ 0.58
CLK4Q9HAZ1 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CLK4Q9HAZ1 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC18.67■□□□□ 0.58
CLK4Q9HAZ1 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
CLK4Q9HAZ1 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC18.67■□□□□ 0.58
CLK4Q9HAZ1 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CLK4Q9HAZ1 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
CLK4Q9HAZ1 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC18.67■□□□□ 0.58
CLK4Q9HAZ1 PTGES2-AS1-201ENST00000443493 2100 ntBASIC18.67■□□□□ 0.58
CLK4Q9HAZ1 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CLK4Q9HAZ1 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
CLK4Q9HAZ1 AC005332.8-201ENST00000622750 2735 ntBASIC18.66■□□□□ 0.58
CLK4Q9HAZ1 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
CLK4Q9HAZ1 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC18.66■□□□□ 0.58
CLK4Q9HAZ1 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
CLK4Q9HAZ1 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
CLK4Q9HAZ1 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
CLK4Q9HAZ1 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CLK4Q9HAZ1 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC18.66■□□□□ 0.58
CLK4Q9HAZ1 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
CLK4Q9HAZ1 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC18.66■□□□□ 0.58
CLK4Q9HAZ1 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CLK4Q9HAZ1 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC18.66■□□□□ 0.58
CLK4Q9HAZ1 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
CLK4Q9HAZ1 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CLK4Q9HAZ1 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CLK4Q9HAZ1 ISG20-202ENST00000379224 540 ntTSL 3 BASIC18.66■□□□□ 0.58
CLK4Q9HAZ1 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC18.66■□□□□ 0.58
CLK4Q9HAZ1 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC18.66■□□□□ 0.58
CLK4Q9HAZ1 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC18.66■□□□□ 0.58
CLK4Q9HAZ1 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CLK4Q9HAZ1 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC18.66■□□□□ 0.58
CLK4Q9HAZ1 MOK-225ENST00000522867 1883 ntTSL 5 BASIC18.66■□□□□ 0.58
CLK4Q9HAZ1 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CLK4Q9HAZ1 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CLK4Q9HAZ1 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
CLK4Q9HAZ1 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CLK4Q9HAZ1 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC18.66■□□□□ 0.58
CLK4Q9HAZ1 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
CLK4Q9HAZ1 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC18.66■□□□□ 0.58
CLK4Q9HAZ1 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CLK4Q9HAZ1 AC124283.5-201ENST00000624661 1809 ntBASIC18.65■□□□□ 0.58
CLK4Q9HAZ1 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
CLK4Q9HAZ1 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
CLK4Q9HAZ1 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
CLK4Q9HAZ1 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC18.65■□□□□ 0.58
CLK4Q9HAZ1 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
CLK4Q9HAZ1 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
CLK4Q9HAZ1 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC18.65■□□□□ 0.58
CLK4Q9HAZ1 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC18.65■□□□□ 0.58
CLK4Q9HAZ1 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
CLK4Q9HAZ1 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC18.65■□□□□ 0.58
CLK4Q9HAZ1 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
CLK4Q9HAZ1 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CLK4Q9HAZ1 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CLK4Q9HAZ1 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC18.65■□□□□ 0.58
CLK4Q9HAZ1 LY6E-205ENST00000519611 635 ntTSL 3 BASIC18.65■□□□□ 0.58
CLK4Q9HAZ1 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC18.65■□□□□ 0.58
CLK4Q9HAZ1 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC18.65■□□□□ 0.58
CLK4Q9HAZ1 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC18.65■□□□□ 0.58
CLK4Q9HAZ1 AC233263.1-201ENST00000578059 224 ntBASIC18.65■□□□□ 0.58
CLK4Q9HAZ1 AC110285.5-201ENST00000611501 352 ntBASIC18.65■□□□□ 0.58
CLK4Q9HAZ1 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
CLK4Q9HAZ1 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CLK4Q9HAZ1 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC18.65■□□□□ 0.58
CLK4Q9HAZ1 TREX1-205ENST00000625293 1783 ntBASIC18.65■□□□□ 0.58
CLK4Q9HAZ1 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CLK4Q9HAZ1 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CLK4Q9HAZ1 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC18.65■□□□□ 0.58
CLK4Q9HAZ1 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC18.65■□□□□ 0.58
CLK4Q9HAZ1 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CLK4Q9HAZ1 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.58
CLK4Q9HAZ1 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
CLK4Q9HAZ1 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
CLK4Q9HAZ1 AP006587.1-201ENST00000534129 1502 ntBASIC18.64■□□□□ 0.58
CLK4Q9HAZ1 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC18.64■□□□□ 0.58
CLK4Q9HAZ1 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC18.64■□□□□ 0.58
CLK4Q9HAZ1 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms