Protein–RNA interactions for Protein: Q96T58

SPEN, Msx2-interacting protein, humanhuman

Known RBP Predictions only

Length 3,664 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPENQ96T58 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
SPENQ96T58 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC17.37■□□□□ 0.37
SPENQ96T58 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
SPENQ96T58 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC17.37■□□□□ 0.37
SPENQ96T58 AP002469.2-201ENST00000531724 424 ntBASIC17.37■□□□□ 0.37
SPENQ96T58 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
SPENQ96T58 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SPENQ96T58 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
SPENQ96T58 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC17.37■□□□□ 0.37
SPENQ96T58 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
SPENQ96T58 AC111152.3-201ENST00000569699 673 ntBASIC17.37■□□□□ 0.37
SPENQ96T58 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC17.37■□□□□ 0.37
SPENQ96T58 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SPENQ96T58 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
SPENQ96T58 AP001271.2-201ENST00000624018 1556 ntBASIC17.37■□□□□ 0.37
SPENQ96T58 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
SPENQ96T58 HBZP1-201ENST00000354915 429 ntBASIC17.36■□□□□ 0.37
SPENQ96T58 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC17.36■□□□□ 0.37
SPENQ96T58 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
SPENQ96T58 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
SPENQ96T58 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
SPENQ96T58 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SPENQ96T58 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC17.36■□□□□ 0.37
SPENQ96T58 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
SPENQ96T58 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
SPENQ96T58 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SPENQ96T58 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC17.36■□□□□ 0.37
SPENQ96T58 AC106795.1-205ENST00000512851 1056 ntBASIC17.36■□□□□ 0.37
SPENQ96T58 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC17.36■□□□□ 0.37
SPENQ96T58 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
SPENQ96T58 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
SPENQ96T58 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SPENQ96T58 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
SPENQ96T58 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
SPENQ96T58 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC17.35■□□□□ 0.37
SPENQ96T58 STARP1-201ENST00000397973 869 ntBASIC17.35■□□□□ 0.37
SPENQ96T58 PRELID1P1-202ENST00000567272 903 ntBASIC17.35■□□□□ 0.37
SPENQ96T58 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC17.35■□□□□ 0.37
SPENQ96T58 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
SPENQ96T58 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC17.35■□□□□ 0.37
SPENQ96T58 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
SPENQ96T58 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC17.35■□□□□ 0.37
SPENQ96T58 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
SPENQ96T58 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
SPENQ96T58 ZNF444P1-201ENST00000559497 298 ntBASIC17.35■□□□□ 0.37
SPENQ96T58 SLC25A6P4-201ENST00000586535 553 ntBASIC17.35■□□□□ 0.37
SPENQ96T58 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
SPENQ96T58 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
SPENQ96T58 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC17.35■□□□□ 0.37
SPENQ96T58 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
SPENQ96T58 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC17.35■□□□□ 0.37
SPENQ96T58 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC17.35■□□□□ 0.37
SPENQ96T58 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC17.35■□□□□ 0.37
SPENQ96T58 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
SPENQ96T58 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
SPENQ96T58 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC17.35■□□□□ 0.37
SPENQ96T58 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC17.34■□□□□ 0.37
SPENQ96T58 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
SPENQ96T58 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC17.34■□□□□ 0.37
SPENQ96T58 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC17.34■□□□□ 0.37
SPENQ96T58 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
SPENQ96T58 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
SPENQ96T58 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC17.34■□□□□ 0.37
SPENQ96T58 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC17.34■□□□□ 0.37
SPENQ96T58 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
SPENQ96T58 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC17.34■□□□□ 0.37
SPENQ96T58 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC17.34■□□□□ 0.37
SPENQ96T58 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC17.34■□□□□ 0.37
SPENQ96T58 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SPENQ96T58 BX119927.1-201ENST00000636596 1552 ntBASIC17.34■□□□□ 0.37
SPENQ96T58 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SPENQ96T58 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC17.33■□□□□ 0.37
SPENQ96T58 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC17.33■□□□□ 0.37
SPENQ96T58 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
SPENQ96T58 TSPY12P-201ENST00000421279 868 ntBASIC17.33■□□□□ 0.37
SPENQ96T58 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC17.33■□□□□ 0.37
SPENQ96T58 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC17.33■□□□□ 0.37
SPENQ96T58 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
SPENQ96T58 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.37
SPENQ96T58 AC036111.1-201ENST00000533973 1582 ntBASIC17.33■□□□□ 0.37
SPENQ96T58 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
SPENQ96T58 KRT8P11-201ENST00000409686 1436 ntBASIC17.33■□□□□ 0.36
SPENQ96T58 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
SPENQ96T58 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
SPENQ96T58 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC17.33■□□□□ 0.36
SPENQ96T58 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC17.33■□□□□ 0.36
SPENQ96T58 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC17.33■□□□□ 0.36
SPENQ96T58 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
SPENQ96T58 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
SPENQ96T58 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
SPENQ96T58 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
SPENQ96T58 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC17.33■□□□□ 0.36
SPENQ96T58 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
SPENQ96T58 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC17.33■□□□□ 0.36
SPENQ96T58 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
SPENQ96T58 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
SPENQ96T58 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
SPENQ96T58 CA15P1-201ENST00000481698 905 ntBASIC17.33■□□□□ 0.36
SPENQ96T58 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
SPENQ96T58 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms