Protein–RNA interactions for Protein: Q96RF0

SNX18, Sorting nexin-18, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX18Q96RF0 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
SNX18Q96RF0 MFF-205ENST00000354503 1085 ntTSL 2 BASIC17.47■□□□□ 0.39
SNX18Q96RF0 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
SNX18Q96RF0 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
SNX18Q96RF0 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC17.47■□□□□ 0.39
SNX18Q96RF0 HES2-206ENST00000489730 730 ntTSL 2 BASIC17.47■□□□□ 0.39
SNX18Q96RF0 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
SNX18Q96RF0 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
SNX18Q96RF0 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
SNX18Q96RF0 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
SNX18Q96RF0 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC17.47■□□□□ 0.39
SNX18Q96RF0 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SNX18Q96RF0 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC17.47■□□□□ 0.39
SNX18Q96RF0 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC17.47■□□□□ 0.39
SNX18Q96RF0 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SNX18Q96RF0 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SNX18Q96RF0 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
SNX18Q96RF0 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SNX18Q96RF0 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC17.47■□□□□ 0.39
SNX18Q96RF0 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
SNX18Q96RF0 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
SNX18Q96RF0 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
SNX18Q96RF0 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
SNX18Q96RF0 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
SNX18Q96RF0 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
SNX18Q96RF0 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
SNX18Q96RF0 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC17.46■□□□□ 0.39
SNX18Q96RF0 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC17.46■□□□□ 0.39
SNX18Q96RF0 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
SNX18Q96RF0 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC17.46■□□□□ 0.39
SNX18Q96RF0 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC17.46■□□□□ 0.39
SNX18Q96RF0 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC17.46■□□□□ 0.39
SNX18Q96RF0 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
SNX18Q96RF0 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
SNX18Q96RF0 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
SNX18Q96RF0 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
SNX18Q96RF0 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
SNX18Q96RF0 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
SNX18Q96RF0 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC17.46■□□□□ 0.38
SNX18Q96RF0 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC17.45■□□□□ 0.38
SNX18Q96RF0 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SNX18Q96RF0 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SNX18Q96RF0 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC17.45■□□□□ 0.38
SNX18Q96RF0 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
SNX18Q96RF0 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC17.45■□□□□ 0.38
SNX18Q96RF0 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
SNX18Q96RF0 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC17.45■□□□□ 0.38
SNX18Q96RF0 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
SNX18Q96RF0 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
SNX18Q96RF0 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC17.45■□□□□ 0.38
SNX18Q96RF0 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SNX18Q96RF0 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC17.45■□□□□ 0.38
SNX18Q96RF0 DUSP5P2-201ENST00000426873 1033 ntBASIC17.45■□□□□ 0.38
SNX18Q96RF0 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC17.45■□□□□ 0.38
SNX18Q96RF0 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SNX18Q96RF0 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC17.45■□□□□ 0.38
SNX18Q96RF0 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC17.45■□□□□ 0.38
SNX18Q96RF0 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC17.45■□□□□ 0.38
SNX18Q96RF0 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC17.45■□□□□ 0.38
SNX18Q96RF0 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC17.45■□□□□ 0.38
SNX18Q96RF0 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC17.45■□□□□ 0.38
SNX18Q96RF0 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
SNX18Q96RF0 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
SNX18Q96RF0 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC17.45■□□□□ 0.38
SNX18Q96RF0 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC17.45■□□□□ 0.38
SNX18Q96RF0 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
SNX18Q96RF0 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SNX18Q96RF0 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
SNX18Q96RF0 AL390961.4-201ENST00000623958 2535 ntBASIC17.45■□□□□ 0.38
SNX18Q96RF0 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SNX18Q96RF0 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC17.44■□□□□ 0.38
SNX18Q96RF0 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
SNX18Q96RF0 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
SNX18Q96RF0 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SNX18Q96RF0 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
SNX18Q96RF0 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SNX18Q96RF0 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
SNX18Q96RF0 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC17.44■□□□□ 0.38
SNX18Q96RF0 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC17.44■□□□□ 0.38
SNX18Q96RF0 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
SNX18Q96RF0 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SNX18Q96RF0 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
SNX18Q96RF0 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SNX18Q96RF0 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
SNX18Q96RF0 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC17.44■□□□□ 0.38
SNX18Q96RF0 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
SNX18Q96RF0 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC17.44■□□□□ 0.38
SNX18Q96RF0 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC17.44■□□□□ 0.38
SNX18Q96RF0 OR2A1-AS1-201ENST00000462305 773 ntBASIC17.44■□□□□ 0.38
SNX18Q96RF0 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC17.44■□□□□ 0.38
SNX18Q96RF0 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC17.44■□□□□ 0.38
SNX18Q96RF0 AC091874.3-201ENST00000512672 1195 ntBASIC17.44■□□□□ 0.38
SNX18Q96RF0 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC17.44■□□□□ 0.38
SNX18Q96RF0 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SNX18Q96RF0 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SNX18Q96RF0 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SNX18Q96RF0 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
SNX18Q96RF0 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC17.44■□□□□ 0.38
SNX18Q96RF0 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
SNX18Q96RF0 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 85.4 ms