Protein–RNA interactions for Protein: Q93096

PTP4A1, Protein tyrosine phosphatase type IVA 1, humanhuman

Predictions only

Length 173 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1Q93096 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
PTP4A1Q93096 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC17.26■□□□□ 0.35
PTP4A1Q93096 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
PTP4A1Q93096 AL355802.2-201ENST00000402069 882 ntBASIC17.26■□□□□ 0.35
PTP4A1Q93096 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC17.26■□□□□ 0.35
PTP4A1Q93096 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC17.26■□□□□ 0.35
PTP4A1Q93096 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC17.26■□□□□ 0.35
PTP4A1Q93096 MYC-209ENST00000641252 345 ntBASIC17.26■□□□□ 0.35
PTP4A1Q93096 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
PTP4A1Q93096 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
PTP4A1Q93096 KRT8P8-201ENST00000434750 1448 ntBASIC17.26■□□□□ 0.35
PTP4A1Q93096 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
PTP4A1Q93096 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
PTP4A1Q93096 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
PTP4A1Q93096 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
PTP4A1Q93096 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC17.26■□□□□ 0.35
PTP4A1Q93096 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
PTP4A1Q93096 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC17.26■□□□□ 0.35
PTP4A1Q93096 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
PTP4A1Q93096 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC17.26■□□□□ 0.35
PTP4A1Q93096 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
PTP4A1Q93096 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
PTP4A1Q93096 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
PTP4A1Q93096 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
PTP4A1Q93096 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
PTP4A1Q93096 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
PTP4A1Q93096 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
PTP4A1Q93096 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC17.25■□□□□ 0.35
PTP4A1Q93096 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
PTP4A1Q93096 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
PTP4A1Q93096 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
PTP4A1Q93096 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
PTP4A1Q93096 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
PTP4A1Q93096 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC17.25■□□□□ 0.35
PTP4A1Q93096 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC17.25■□□□□ 0.35
PTP4A1Q93096 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC17.25■□□□□ 0.35
PTP4A1Q93096 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
PTP4A1Q93096 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
PTP4A1Q93096 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC17.25■□□□□ 0.35
PTP4A1Q93096 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC17.25■□□□□ 0.35
PTP4A1Q93096 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
PTP4A1Q93096 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
PTP4A1Q93096 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC17.25■□□□□ 0.35
PTP4A1Q93096 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
PTP4A1Q93096 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
PTP4A1Q93096 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC17.25■□□□□ 0.35
PTP4A1Q93096 IRX1P1-201ENST00000438849 1838 ntBASIC17.25■□□□□ 0.35
PTP4A1Q93096 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
PTP4A1Q93096 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
PTP4A1Q93096 AP006587.1-201ENST00000534129 1502 ntBASIC17.25■□□□□ 0.35
PTP4A1Q93096 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
PTP4A1Q93096 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
PTP4A1Q93096 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC17.25■□□□□ 0.35
PTP4A1Q93096 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC17.25■□□□□ 0.35
PTP4A1Q93096 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
PTP4A1Q93096 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
PTP4A1Q93096 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC17.24■□□□□ 0.35
PTP4A1Q93096 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PTP4A1Q93096 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PTP4A1Q93096 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
PTP4A1Q93096 AC093525.10-201ENST00000625130 1569 ntBASIC17.24■□□□□ 0.35
PTP4A1Q93096 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PTP4A1Q93096 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PTP4A1Q93096 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PTP4A1Q93096 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PTP4A1Q93096 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PTP4A1Q93096 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PTP4A1Q93096 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC17.24■□□□□ 0.35
PTP4A1Q93096 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC17.24■□□□□ 0.35
PTP4A1Q93096 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC17.24■□□□□ 0.35
PTP4A1Q93096 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC17.24■□□□□ 0.35
PTP4A1Q93096 GATS-209ENST00000454084 1030 ntTSL 3 BASIC17.24■□□□□ 0.35
PTP4A1Q93096 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC17.24■□□□□ 0.35
PTP4A1Q93096 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC17.24■□□□□ 0.35
PTP4A1Q93096 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC17.24■□□□□ 0.35
PTP4A1Q93096 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
PTP4A1Q93096 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PTP4A1Q93096 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC17.24■□□□□ 0.35
PTP4A1Q93096 AC020916.1-201ENST00000587762 1774 ntBASIC17.24■□□□□ 0.35
PTP4A1Q93096 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
PTP4A1Q93096 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PTP4A1Q93096 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC17.24■□□□□ 0.35
PTP4A1Q93096 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC17.24■□□□□ 0.35
PTP4A1Q93096 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PTP4A1Q93096 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
PTP4A1Q93096 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PTP4A1Q93096 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PTP4A1Q93096 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PTP4A1Q93096 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
PTP4A1Q93096 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PTP4A1Q93096 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC17.23■□□□□ 0.35
PTP4A1Q93096 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC17.23■□□□□ 0.35
PTP4A1Q93096 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PTP4A1Q93096 WIZP1-201ENST00000531444 2299 ntBASIC17.23■□□□□ 0.35
PTP4A1Q93096 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
PTP4A1Q93096 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
PTP4A1Q93096 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
PTP4A1Q93096 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
PTP4A1Q93096 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
PTP4A1Q93096 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 25.1 ms