Protein–RNA interactions for Protein: Q8TCU4

ALMS1, Alstrom syndrome protein 1, humanhuman

Predictions only

Length 4,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1Q8TCU4 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC12.98□□□□□ -0.33
ALMS1Q8TCU4 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
ALMS1Q8TCU4 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
ALMS1Q8TCU4 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
ALMS1Q8TCU4 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
ALMS1Q8TCU4 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC12.98□□□□□ -0.33
ALMS1Q8TCU4 FP700111.2-201ENST00000619190 1892 ntBASIC12.98□□□□□ -0.33
ALMS1Q8TCU4 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
ALMS1Q8TCU4 AC233723.2-201ENST00000623798 2106 ntBASIC12.98□□□□□ -0.33
ALMS1Q8TCU4 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC12.98□□□□□ -0.33
ALMS1Q8TCU4 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC12.98□□□□□ -0.33
ALMS1Q8TCU4 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC12.98□□□□□ -0.33
ALMS1Q8TCU4 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
ALMS1Q8TCU4 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC12.98□□□□□ -0.33
ALMS1Q8TCU4 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
ALMS1Q8TCU4 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC12.98□□□□□ -0.33
ALMS1Q8TCU4 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC12.98□□□□□ -0.33
ALMS1Q8TCU4 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC12.98□□□□□ -0.33
ALMS1Q8TCU4 AL390719.2-201ENST00000606993 987 ntBASIC12.98□□□□□ -0.33
ALMS1Q8TCU4 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
ALMS1Q8TCU4 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC12.98□□□□□ -0.33
ALMS1Q8TCU4 AL391807.1-203ENST00000604392 2365 ntBASIC12.97□□□□□ -0.33
ALMS1Q8TCU4 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC12.97□□□□□ -0.33
ALMS1Q8TCU4 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
ALMS1Q8TCU4 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
ALMS1Q8TCU4 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC12.97□□□□□ -0.33
ALMS1Q8TCU4 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
ALMS1Q8TCU4 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC12.97□□□□□ -0.33
ALMS1Q8TCU4 ERF-202ENST00000440177 2032 ntTSL 2 BASIC12.97□□□□□ -0.33
ALMS1Q8TCU4 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
ALMS1Q8TCU4 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
ALMS1Q8TCU4 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC12.97□□□□□ -0.33
ALMS1Q8TCU4 AC091607.1-201ENST00000490318 1060 ntBASIC12.97□□□□□ -0.33
ALMS1Q8TCU4 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC12.97□□□□□ -0.33
ALMS1Q8TCU4 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC12.97□□□□□ -0.33
ALMS1Q8TCU4 BID-203ENST00000399765 1879 ntTSL 2 BASIC12.97□□□□□ -0.33
ALMS1Q8TCU4 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
ALMS1Q8TCU4 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
ALMS1Q8TCU4 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
ALMS1Q8TCU4 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC12.97□□□□□ -0.33
ALMS1Q8TCU4 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC12.97□□□□□ -0.33
ALMS1Q8TCU4 DRAXINP1-201ENST00000437611 948 ntBASIC12.97□□□□□ -0.33
ALMS1Q8TCU4 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC12.97□□□□□ -0.33
ALMS1Q8TCU4 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC12.97□□□□□ -0.33
ALMS1Q8TCU4 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
ALMS1Q8TCU4 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
ALMS1Q8TCU4 FEM1AP4-201ENST00000443167 1987 ntBASIC12.97□□□□□ -0.33
ALMS1Q8TCU4 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC12.97□□□□□ -0.33
ALMS1Q8TCU4 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
ALMS1Q8TCU4 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
ALMS1Q8TCU4 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
ALMS1Q8TCU4 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
ALMS1Q8TCU4 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC12.97□□□□□ -0.33
ALMS1Q8TCU4 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
ALMS1Q8TCU4 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
ALMS1Q8TCU4 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
ALMS1Q8TCU4 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
ALMS1Q8TCU4 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
ALMS1Q8TCU4 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC12.96□□□□□ -0.33
ALMS1Q8TCU4 KRT18P67-201ENST00000432816 1264 ntBASIC12.96□□□□□ -0.33
ALMS1Q8TCU4 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC12.96□□□□□ -0.33
ALMS1Q8TCU4 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC12.96□□□□□ -0.33
ALMS1Q8TCU4 AL353801.3-201ENST00000609898 542 ntBASIC12.96□□□□□ -0.33
ALMS1Q8TCU4 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
ALMS1Q8TCU4 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
ALMS1Q8TCU4 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
ALMS1Q8TCU4 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
ALMS1Q8TCU4 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
ALMS1Q8TCU4 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC12.96□□□□□ -0.33
ALMS1Q8TCU4 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
ALMS1Q8TCU4 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
ALMS1Q8TCU4 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
ALMS1Q8TCU4 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
ALMS1Q8TCU4 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
ALMS1Q8TCU4 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC12.96□□□□□ -0.34
ALMS1Q8TCU4 AC021188.1-201ENST00000421534 740 ntTSL 3 BASIC12.96□□□□□ -0.34
ALMS1Q8TCU4 COX10-202ENST00000429152 875 ntTSL 2 BASIC12.96□□□□□ -0.34
ALMS1Q8TCU4 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC12.96□□□□□ -0.34
ALMS1Q8TCU4 POLD2P1-201ENST00000511220 997 ntBASIC12.96□□□□□ -0.34
ALMS1Q8TCU4 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC12.96□□□□□ -0.34
ALMS1Q8TCU4 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
ALMS1Q8TCU4 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
ALMS1Q8TCU4 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC12.96□□□□□ -0.34
ALMS1Q8TCU4 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC12.96□□□□□ -0.34
ALMS1Q8TCU4 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC12.96□□□□□ -0.34
ALMS1Q8TCU4 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
ALMS1Q8TCU4 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
ALMS1Q8TCU4 AL590627.1-203ENST00000421194 1026 ntBASIC12.95□□□□□ -0.34
ALMS1Q8TCU4 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC12.95□□□□□ -0.34
ALMS1Q8TCU4 NME1-207ENST00000480143 964 ntTSL 2 BASIC12.95□□□□□ -0.34
ALMS1Q8TCU4 FICD-205ENST00000552758 603 ntTSL 2 BASIC12.95□□□□□ -0.34
ALMS1Q8TCU4 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC12.95□□□□□ -0.34
ALMS1Q8TCU4 RNF126P1-202ENST00000569893 925 ntBASIC12.95□□□□□ -0.34
ALMS1Q8TCU4 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
ALMS1Q8TCU4 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
ALMS1Q8TCU4 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
ALMS1Q8TCU4 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
ALMS1Q8TCU4 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC12.95□□□□□ -0.34
ALMS1Q8TCU4 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
ALMS1Q8TCU4 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 25.7 ms