Protein–RNA interactions for Protein: Q8N139

ABCA6, ATP-binding cassette sub-family A member 6, humanhuman

Predictions only

Length 1,617 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA6Q8N139 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC28.56■■■□□ 2.16
ABCA6Q8N139 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC28.56■■■□□ 2.16
ABCA6Q8N139 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC28.56■■■□□ 2.16
ABCA6Q8N139 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC28.56■■■□□ 2.16
ABCA6Q8N139 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC28.56■■■□□ 2.16
ABCA6Q8N139 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC28.55■■■□□ 2.16
ABCA6Q8N139 GAD2-202ENST00000376248 680 ntTSL 5 BASIC28.55■■■□□ 2.16
ABCA6Q8N139 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC28.55■■■□□ 2.16
ABCA6Q8N139 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC28.55■■■□□ 2.16
ABCA6Q8N139 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC28.55■■■□□ 2.16
ABCA6Q8N139 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC28.55■■■□□ 2.16
ABCA6Q8N139 AC024243.1-201ENST00000609234 778 ntBASIC28.55■■■□□ 2.16
ABCA6Q8N139 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC28.55■■■□□ 2.16
ABCA6Q8N139 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC28.55■■■□□ 2.16
ABCA6Q8N139 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC28.55■■■□□ 2.16
ABCA6Q8N139 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC28.55■■■□□ 2.16
ABCA6Q8N139 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC28.55■■■□□ 2.16
ABCA6Q8N139 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC28.54■■■□□ 2.16
ABCA6Q8N139 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC28.54■■■□□ 2.16
ABCA6Q8N139 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC28.54■■■□□ 2.16
ABCA6Q8N139 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC28.54■■■□□ 2.16
ABCA6Q8N139 GXYLT1P4-201ENST00000613576 1192 ntBASIC28.54■■■□□ 2.16
ABCA6Q8N139 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC28.54■■■□□ 2.16
ABCA6Q8N139 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC28.54■■■□□ 2.16
ABCA6Q8N139 AL157888.1-201ENST00000631930 593 ntBASIC28.54■■■□□ 2.16
ABCA6Q8N139 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC28.54■■■□□ 2.16
ABCA6Q8N139 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC28.54■■■□□ 2.16
ABCA6Q8N139 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC28.54■■■□□ 2.16
ABCA6Q8N139 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC28.54■■■□□ 2.16
ABCA6Q8N139 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC28.54■■■□□ 2.16
ABCA6Q8N139 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC28.54■■■□□ 2.16
ABCA6Q8N139 TOB2P1-201ENST00000469761 992 ntBASIC28.54■■■□□ 2.16
ABCA6Q8N139 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC28.54■■■□□ 2.16
ABCA6Q8N139 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC28.54■■■□□ 2.16
ABCA6Q8N139 RNF126P1-202ENST00000569893 925 ntBASIC28.54■■■□□ 2.16
ABCA6Q8N139 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC28.54■■■□□ 2.16
ABCA6Q8N139 AC120114.3-201ENST00000611923 658 ntBASIC28.54■■■□□ 2.16
ABCA6Q8N139 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC28.54■■■□□ 2.16
ABCA6Q8N139 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC28.54■■■□□ 2.16
ABCA6Q8N139 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC28.54■■■□□ 2.16
ABCA6Q8N139 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC28.54■■■□□ 2.16
ABCA6Q8N139 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC28.54■■■□□ 2.16
ABCA6Q8N139 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC28.53■■■□□ 2.16
ABCA6Q8N139 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC28.53■■■□□ 2.16
ABCA6Q8N139 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC28.53■■■□□ 2.16
ABCA6Q8N139 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC28.53■■■□□ 2.16
ABCA6Q8N139 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC28.53■■■□□ 2.16
ABCA6Q8N139 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC28.53■■■□□ 2.16
ABCA6Q8N139 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC28.53■■■□□ 2.16
ABCA6Q8N139 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC28.53■■■□□ 2.16
ABCA6Q8N139 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC28.53■■■□□ 2.16
ABCA6Q8N139 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC28.53■■■□□ 2.16
ABCA6Q8N139 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC28.53■■■□□ 2.16
ABCA6Q8N139 PNN-202ENST00000553331 656 ntTSL 3 BASIC28.53■■■□□ 2.16
ABCA6Q8N139 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC28.53■■■□□ 2.16
ABCA6Q8N139 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC28.53■■■□□ 2.16
ABCA6Q8N139 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC28.53■■■□□ 2.16
ABCA6Q8N139 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC28.53■■■□□ 2.16
ABCA6Q8N139 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC28.53■■■□□ 2.16
ABCA6Q8N139 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC28.53■■■□□ 2.16
ABCA6Q8N139 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC28.52■■■□□ 2.16
ABCA6Q8N139 GOLGA2P11-201ENST00000562660 1621 ntBASIC28.52■■■□□ 2.16
ABCA6Q8N139 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC28.52■■■□□ 2.16
ABCA6Q8N139 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC28.52■■■□□ 2.16
ABCA6Q8N139 AL136038.4-201ENST00000603606 1261 ntBASIC28.52■■■□□ 2.16
ABCA6Q8N139 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC28.52■■■□□ 2.16
ABCA6Q8N139 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC28.52■■■□□ 2.16
ABCA6Q8N139 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC28.52■■■□□ 2.16
ABCA6Q8N139 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC28.52■■■□□ 2.16
ABCA6Q8N139 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC28.52■■■□□ 2.16
ABCA6Q8N139 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC28.51■■■□□ 2.15
ABCA6Q8N139 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC28.51■■■□□ 2.15
ABCA6Q8N139 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC28.51■■■□□ 2.15
ABCA6Q8N139 LINC00265-3P-201ENST00000447588 903 ntBASIC28.51■■■□□ 2.15
ABCA6Q8N139 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC28.51■■■□□ 2.15
ABCA6Q8N139 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC28.51■■■□□ 2.15
ABCA6Q8N139 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC28.51■■■□□ 2.15
ABCA6Q8N139 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC28.51■■■□□ 2.15
ABCA6Q8N139 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC28.51■■■□□ 2.15
ABCA6Q8N139 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC28.51■■■□□ 2.15
ABCA6Q8N139 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC28.51■■■□□ 2.15
ABCA6Q8N139 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC28.51■■■□□ 2.15
ABCA6Q8N139 AKR1C7P-201ENST00000305623 895 ntBASIC28.51■■■□□ 2.15
ABCA6Q8N139 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC28.51■■■□□ 2.15
ABCA6Q8N139 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC28.51■■■□□ 2.15
ABCA6Q8N139 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC28.51■■■□□ 2.15
ABCA6Q8N139 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC28.5■■■□□ 2.15
ABCA6Q8N139 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC28.5■■■□□ 2.15
ABCA6Q8N139 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC28.5■■■□□ 2.15
ABCA6Q8N139 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC28.5■■■□□ 2.15
ABCA6Q8N139 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC28.5■■■□□ 2.15
ABCA6Q8N139 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC28.5■■■□□ 2.15
ABCA6Q8N139 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC28.5■■■□□ 2.15
ABCA6Q8N139 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC28.5■■■□□ 2.15
ABCA6Q8N139 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC28.5■■■□□ 2.15
ABCA6Q8N139 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC28.5■■■□□ 2.15
ABCA6Q8N139 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC28.49■■■□□ 2.15
ABCA6Q8N139 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC28.49■■■□□ 2.15
ABCA6Q8N139 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC28.49■■■□□ 2.15
ABCA6Q8N139 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC28.49■■■□□ 2.15
Retrieved 100 of 98,524 protein–RNA pairs in 24.6 ms