Protein–RNA interactions for Protein: Q6ZW05

PTCHD4, Patched domain-containing protein 4, humanhuman

Predictions only

Length 846 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD4Q6ZW05 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC17.69■□□□□ 0.42
PTCHD4Q6ZW05 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC17.69■□□□□ 0.42
PTCHD4Q6ZW05 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
PTCHD4Q6ZW05 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC17.69■□□□□ 0.42
PTCHD4Q6ZW05 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
PTCHD4Q6ZW05 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC17.69■□□□□ 0.42
PTCHD4Q6ZW05 ISCU-212ENST00000547005 795 ntTSL 3 BASIC17.69■□□□□ 0.42
PTCHD4Q6ZW05 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
PTCHD4Q6ZW05 AC133552.2-202ENST00000575694 574 ntBASIC17.69■□□□□ 0.42
PTCHD4Q6ZW05 AL050303.2-201ENST00000619798 666 ntBASIC17.69■□□□□ 0.42
PTCHD4Q6ZW05 AC141586.3-201ENST00000562166 1838 ntBASIC17.69■□□□□ 0.42
PTCHD4Q6ZW05 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
PTCHD4Q6ZW05 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC17.69■□□□□ 0.42
PTCHD4Q6ZW05 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC17.69■□□□□ 0.42
PTCHD4Q6ZW05 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC17.69■□□□□ 0.42
PTCHD4Q6ZW05 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC17.69■□□□□ 0.42
PTCHD4Q6ZW05 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC17.69■□□□□ 0.42
PTCHD4Q6ZW05 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC17.69■□□□□ 0.42
PTCHD4Q6ZW05 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC17.68■□□□□ 0.42
PTCHD4Q6ZW05 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC17.68■□□□□ 0.42
PTCHD4Q6ZW05 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PTCHD4Q6ZW05 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC17.68■□□□□ 0.42
PTCHD4Q6ZW05 USP49-202ENST00000373010 2446 ntTSL 5 BASIC17.68■□□□□ 0.42
PTCHD4Q6ZW05 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
PTCHD4Q6ZW05 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC17.68■□□□□ 0.42
PTCHD4Q6ZW05 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PTCHD4Q6ZW05 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
PTCHD4Q6ZW05 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC17.68■□□□□ 0.42
PTCHD4Q6ZW05 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
PTCHD4Q6ZW05 CDCA4P2-201ENST00000441182 718 ntBASIC17.68■□□□□ 0.42
PTCHD4Q6ZW05 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC17.68■□□□□ 0.42
PTCHD4Q6ZW05 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
PTCHD4Q6ZW05 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC17.68■□□□□ 0.42
PTCHD4Q6ZW05 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC17.68■□□□□ 0.42
PTCHD4Q6ZW05 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
PTCHD4Q6ZW05 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
PTCHD4Q6ZW05 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PTCHD4Q6ZW05 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
PTCHD4Q6ZW05 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
PTCHD4Q6ZW05 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC17.68■□□□□ 0.42
PTCHD4Q6ZW05 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
PTCHD4Q6ZW05 NXN-202ENST00000537628 1340 ntTSL 3 BASIC17.68■□□□□ 0.42
PTCHD4Q6ZW05 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC17.68■□□□□ 0.42
PTCHD4Q6ZW05 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PTCHD4Q6ZW05 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
PTCHD4Q6ZW05 TEX21P-204ENST00000641479 1693 ntBASIC17.67■□□□□ 0.42
PTCHD4Q6ZW05 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
PTCHD4Q6ZW05 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC17.67■□□□□ 0.42
PTCHD4Q6ZW05 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
PTCHD4Q6ZW05 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
PTCHD4Q6ZW05 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
PTCHD4Q6ZW05 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
PTCHD4Q6ZW05 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
PTCHD4Q6ZW05 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
PTCHD4Q6ZW05 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC17.67■□□□□ 0.42
PTCHD4Q6ZW05 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
PTCHD4Q6ZW05 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
PTCHD4Q6ZW05 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC17.67■□□□□ 0.42
PTCHD4Q6ZW05 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
PTCHD4Q6ZW05 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
PTCHD4Q6ZW05 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC17.67■□□□□ 0.42
PTCHD4Q6ZW05 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
PTCHD4Q6ZW05 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC17.67■□□□□ 0.42
PTCHD4Q6ZW05 LSM12P1-201ENST00000411836 588 ntBASIC17.67■□□□□ 0.42
PTCHD4Q6ZW05 HES2-205ENST00000487437 968 ntTSL 3 BASIC17.67■□□□□ 0.42
PTCHD4Q6ZW05 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
PTCHD4Q6ZW05 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
PTCHD4Q6ZW05 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
PTCHD4Q6ZW05 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
PTCHD4Q6ZW05 AL390961.4-201ENST00000623958 2535 ntBASIC17.67■□□□□ 0.42
PTCHD4Q6ZW05 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
PTCHD4Q6ZW05 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
PTCHD4Q6ZW05 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
PTCHD4Q6ZW05 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC17.67■□□□□ 0.42
PTCHD4Q6ZW05 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
PTCHD4Q6ZW05 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC17.67■□□□□ 0.42
PTCHD4Q6ZW05 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
PTCHD4Q6ZW05 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
PTCHD4Q6ZW05 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
PTCHD4Q6ZW05 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
PTCHD4Q6ZW05 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC17.67■□□□□ 0.42
PTCHD4Q6ZW05 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
PTCHD4Q6ZW05 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC17.67■□□□□ 0.42
PTCHD4Q6ZW05 COMP-202ENST00000425807 2292 ntTSL 2 BASIC17.67■□□□□ 0.42
PTCHD4Q6ZW05 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC17.66■□□□□ 0.42
PTCHD4Q6ZW05 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
PTCHD4Q6ZW05 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
PTCHD4Q6ZW05 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC17.66■□□□□ 0.42
PTCHD4Q6ZW05 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC17.66■□□□□ 0.42
PTCHD4Q6ZW05 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
PTCHD4Q6ZW05 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
PTCHD4Q6ZW05 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
PTCHD4Q6ZW05 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC17.66■□□□□ 0.42
PTCHD4Q6ZW05 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
PTCHD4Q6ZW05 PHB2-213ENST00000546111 858 ntTSL 2 BASIC17.66■□□□□ 0.42
PTCHD4Q6ZW05 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
PTCHD4Q6ZW05 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC17.66■□□□□ 0.42
PTCHD4Q6ZW05 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
PTCHD4Q6ZW05 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
PTCHD4Q6ZW05 AC005332.8-201ENST00000622750 2735 ntBASIC17.66■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 35.2 ms