Protein–RNA interactions for Protein: Q6PJG6

BRAT1, BRCA1-associated ATM activator 1, humanhuman

Predictions only

Length 821 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1Q6PJG6 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
BRAT1Q6PJG6 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
BRAT1Q6PJG6 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
BRAT1Q6PJG6 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC19.27■□□□□ 0.68
BRAT1Q6PJG6 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC19.27■□□□□ 0.68
BRAT1Q6PJG6 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
BRAT1Q6PJG6 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC19.27■□□□□ 0.68
BRAT1Q6PJG6 FDX2-206ENST00000492239 773 ntTSL 2 BASIC19.27■□□□□ 0.68
BRAT1Q6PJG6 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
BRAT1Q6PJG6 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
BRAT1Q6PJG6 AC097493.4-201ENST00000641197 219 ntBASIC19.27■□□□□ 0.68
BRAT1Q6PJG6 AL158211.5-201ENST00000623583 2518 ntBASIC19.27■□□□□ 0.68
BRAT1Q6PJG6 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.67
BRAT1Q6PJG6 POLI-202ENST00000406285 2030 ntTSL 2 BASIC19.27■□□□□ 0.67
BRAT1Q6PJG6 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC19.27■□□□□ 0.67
BRAT1Q6PJG6 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
BRAT1Q6PJG6 KRT8P11-201ENST00000409686 1436 ntBASIC19.26■□□□□ 0.67
BRAT1Q6PJG6 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
BRAT1Q6PJG6 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC19.26■□□□□ 0.67
BRAT1Q6PJG6 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
BRAT1Q6PJG6 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
BRAT1Q6PJG6 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
BRAT1Q6PJG6 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
BRAT1Q6PJG6 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
BRAT1Q6PJG6 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
BRAT1Q6PJG6 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC19.26■□□□□ 0.67
BRAT1Q6PJG6 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
BRAT1Q6PJG6 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
BRAT1Q6PJG6 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
BRAT1Q6PJG6 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC19.26■□□□□ 0.67
BRAT1Q6PJG6 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC19.26■□□□□ 0.67
BRAT1Q6PJG6 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
BRAT1Q6PJG6 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
BRAT1Q6PJG6 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
BRAT1Q6PJG6 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
BRAT1Q6PJG6 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
BRAT1Q6PJG6 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
BRAT1Q6PJG6 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
BRAT1Q6PJG6 TP73-202ENST00000354437 2140 ntTSL 5 BASIC19.25■□□□□ 0.67
BRAT1Q6PJG6 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC19.25■□□□□ 0.67
BRAT1Q6PJG6 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
BRAT1Q6PJG6 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
BRAT1Q6PJG6 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC19.25■□□□□ 0.67
BRAT1Q6PJG6 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
BRAT1Q6PJG6 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
BRAT1Q6PJG6 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
BRAT1Q6PJG6 CYP2D8P-201ENST00000433633 1490 ntBASIC19.25■□□□□ 0.67
BRAT1Q6PJG6 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
BRAT1Q6PJG6 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
BRAT1Q6PJG6 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC19.25■□□□□ 0.67
BRAT1Q6PJG6 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
BRAT1Q6PJG6 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
BRAT1Q6PJG6 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC19.25■□□□□ 0.67
BRAT1Q6PJG6 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC19.25■□□□□ 0.67
BRAT1Q6PJG6 AC012306.2-201ENST00000609350 630 ntBASIC19.25■□□□□ 0.67
BRAT1Q6PJG6 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
BRAT1Q6PJG6 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC19.25■□□□□ 0.67
BRAT1Q6PJG6 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
BRAT1Q6PJG6 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC19.24■□□□□ 0.67
BRAT1Q6PJG6 Z82202.1-201ENST00000623446 1880 ntBASIC19.24■□□□□ 0.67
BRAT1Q6PJG6 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
BRAT1Q6PJG6 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
BRAT1Q6PJG6 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
BRAT1Q6PJG6 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC19.24■□□□□ 0.67
BRAT1Q6PJG6 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC19.24■□□□□ 0.67
BRAT1Q6PJG6 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC19.24■□□□□ 0.67
BRAT1Q6PJG6 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC19.24■□□□□ 0.67
BRAT1Q6PJG6 PRR31-201ENST00000371629 978 ntTSL 2 BASIC19.24■□□□□ 0.67
BRAT1Q6PJG6 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC19.24■□□□□ 0.67
BRAT1Q6PJG6 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
BRAT1Q6PJG6 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC19.24■□□□□ 0.67
BRAT1Q6PJG6 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC19.24■□□□□ 0.67
BRAT1Q6PJG6 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC19.24■□□□□ 0.67
BRAT1Q6PJG6 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
BRAT1Q6PJG6 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC19.24■□□□□ 0.67
BRAT1Q6PJG6 AC145285.6-201ENST00000604632 637 ntBASIC19.24■□□□□ 0.67
BRAT1Q6PJG6 AC010947.1-201ENST00000623454 693 ntBASIC19.24■□□□□ 0.67
BRAT1Q6PJG6 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC19.24■□□□□ 0.67
BRAT1Q6PJG6 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC19.24■□□□□ 0.67
BRAT1Q6PJG6 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC19.24■□□□□ 0.67
BRAT1Q6PJG6 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
BRAT1Q6PJG6 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC19.24■□□□□ 0.67
BRAT1Q6PJG6 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
BRAT1Q6PJG6 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
BRAT1Q6PJG6 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC19.23■□□□□ 0.67
BRAT1Q6PJG6 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
BRAT1Q6PJG6 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
BRAT1Q6PJG6 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
BRAT1Q6PJG6 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
BRAT1Q6PJG6 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC19.23■□□□□ 0.67
BRAT1Q6PJG6 TSPY14P-201ENST00000303979 915 ntBASIC19.23■□□□□ 0.67
BRAT1Q6PJG6 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
BRAT1Q6PJG6 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
BRAT1Q6PJG6 ECEL1P3-201ENST00000427961 737 ntBASIC19.23■□□□□ 0.67
BRAT1Q6PJG6 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC19.23■□□□□ 0.67
BRAT1Q6PJG6 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC19.23■□□□□ 0.67
BRAT1Q6PJG6 EGLN1P1-201ENST00000531623 762 ntBASIC19.23■□□□□ 0.67
BRAT1Q6PJG6 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC19.23■□□□□ 0.67
BRAT1Q6PJG6 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
BRAT1Q6PJG6 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 40.6 ms