Protein–RNA interactions for Protein: Q643R3

LPCAT4, Lysophospholipid acyltransferase LPCAT4, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT4Q643R3 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
LPCAT4Q643R3 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
LPCAT4Q643R3 MPST-204ENST00000404393 1329 ntTSL 5 BASIC18.12■□□□□ 0.49
LPCAT4Q643R3 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
LPCAT4Q643R3 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
LPCAT4Q643R3 KRT8P20-201ENST00000423953 1409 ntBASIC18.12■□□□□ 0.49
LPCAT4Q643R3 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC18.12■□□□□ 0.49
LPCAT4Q643R3 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
LPCAT4Q643R3 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC18.12■□□□□ 0.49
LPCAT4Q643R3 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
LPCAT4Q643R3 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
LPCAT4Q643R3 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
LPCAT4Q643R3 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC18.12■□□□□ 0.49
LPCAT4Q643R3 ANO7L1-203ENST00000602586 1720 ntBASIC18.12■□□□□ 0.49
LPCAT4Q643R3 IRX1P1-201ENST00000438849 1838 ntBASIC18.12■□□□□ 0.49
LPCAT4Q643R3 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
LPCAT4Q643R3 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
LPCAT4Q643R3 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
LPCAT4Q643R3 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
LPCAT4Q643R3 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
LPCAT4Q643R3 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
LPCAT4Q643R3 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
LPCAT4Q643R3 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC18.11■□□□□ 0.49
LPCAT4Q643R3 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
LPCAT4Q643R3 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
LPCAT4Q643R3 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
LPCAT4Q643R3 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
LPCAT4Q643R3 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
LPCAT4Q643R3 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC18.11■□□□□ 0.49
LPCAT4Q643R3 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC18.11■□□□□ 0.49
LPCAT4Q643R3 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
LPCAT4Q643R3 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC18.11■□□□□ 0.49
LPCAT4Q643R3 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC18.11■□□□□ 0.49
LPCAT4Q643R3 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
LPCAT4Q643R3 AC008764.7-201ENST00000593779 1081 ntBASIC18.11■□□□□ 0.49
LPCAT4Q643R3 AC243732.1-201ENST00000612648 864 ntBASIC18.11■□□□□ 0.49
LPCAT4Q643R3 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC18.11■□□□□ 0.49
LPCAT4Q643R3 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC18.11■□□□□ 0.49
LPCAT4Q643R3 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
LPCAT4Q643R3 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC18.11■□□□□ 0.49
LPCAT4Q643R3 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
LPCAT4Q643R3 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
LPCAT4Q643R3 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
LPCAT4Q643R3 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
LPCAT4Q643R3 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC18.11■□□□□ 0.49
LPCAT4Q643R3 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC18.11■□□□□ 0.49
LPCAT4Q643R3 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
LPCAT4Q643R3 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC18.11■□□□□ 0.49
LPCAT4Q643R3 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC18.11■□□□□ 0.49
LPCAT4Q643R3 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC18.11■□□□□ 0.49
LPCAT4Q643R3 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC18.11■□□□□ 0.49
LPCAT4Q643R3 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
LPCAT4Q643R3 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
LPCAT4Q643R3 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
LPCAT4Q643R3 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
LPCAT4Q643R3 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC18.1■□□□□ 0.49
LPCAT4Q643R3 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
LPCAT4Q643R3 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
LPCAT4Q643R3 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
LPCAT4Q643R3 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
LPCAT4Q643R3 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
LPCAT4Q643R3 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
LPCAT4Q643R3 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
LPCAT4Q643R3 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
LPCAT4Q643R3 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
LPCAT4Q643R3 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
LPCAT4Q643R3 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
LPCAT4Q643R3 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
LPCAT4Q643R3 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
LPCAT4Q643R3 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
LPCAT4Q643R3 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
LPCAT4Q643R3 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
LPCAT4Q643R3 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC18.1■□□□□ 0.49
LPCAT4Q643R3 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
LPCAT4Q643R3 UNC93B3-201ENST00000308076 687 ntBASIC18.1■□□□□ 0.49
LPCAT4Q643R3 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
LPCAT4Q643R3 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC18.1■□□□□ 0.49
LPCAT4Q643R3 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC18.1■□□□□ 0.49
LPCAT4Q643R3 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC18.1■□□□□ 0.49
LPCAT4Q643R3 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC18.1■□□□□ 0.49
LPCAT4Q643R3 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
LPCAT4Q643R3 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
LPCAT4Q643R3 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
LPCAT4Q643R3 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC18.1■□□□□ 0.49
LPCAT4Q643R3 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
LPCAT4Q643R3 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
LPCAT4Q643R3 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
LPCAT4Q643R3 AC126763.1-201ENST00000552015 2118 ntBASIC18.1■□□□□ 0.49
LPCAT4Q643R3 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
LPCAT4Q643R3 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
LPCAT4Q643R3 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
LPCAT4Q643R3 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC18.09■□□□□ 0.49
LPCAT4Q643R3 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
LPCAT4Q643R3 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
LPCAT4Q643R3 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC18.09■□□□□ 0.49
LPCAT4Q643R3 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
LPCAT4Q643R3 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
LPCAT4Q643R3 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
LPCAT4Q643R3 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
LPCAT4Q643R3 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 35.2 ms