Protein–RNA interactions for Protein: Q5VXM1

CDCP2, CUB domain-containing protein 2, humanhuman

Predictions only

Length 449 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDCP2Q5VXM1 IRF5-214ENST00000613821 595 ntTSL 5 BASIC18.27■□□□□ 0.52
CDCP2Q5VXM1 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
CDCP2Q5VXM1 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC18.27■□□□□ 0.52
CDCP2Q5VXM1 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC18.27■□□□□ 0.51
CDCP2Q5VXM1 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
CDCP2Q5VXM1 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
CDCP2Q5VXM1 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
CDCP2Q5VXM1 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC18.27■□□□□ 0.51
CDCP2Q5VXM1 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
CDCP2Q5VXM1 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
CDCP2Q5VXM1 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
CDCP2Q5VXM1 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.51
CDCP2Q5VXM1 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
CDCP2Q5VXM1 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
CDCP2Q5VXM1 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC18.26■□□□□ 0.51
CDCP2Q5VXM1 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CDCP2Q5VXM1 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CDCP2Q5VXM1 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CDCP2Q5VXM1 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
CDCP2Q5VXM1 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CDCP2Q5VXM1 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC18.26■□□□□ 0.51
CDCP2Q5VXM1 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CDCP2Q5VXM1 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CDCP2Q5VXM1 TSPY21P-201ENST00000433481 731 ntBASIC18.26■□□□□ 0.51
CDCP2Q5VXM1 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CDCP2Q5VXM1 TSPY23P-201ENST00000440136 739 ntBASIC18.26■□□□□ 0.51
CDCP2Q5VXM1 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC18.26■□□□□ 0.51
CDCP2Q5VXM1 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC18.26■□□□□ 0.51
CDCP2Q5VXM1 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
CDCP2Q5VXM1 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
CDCP2Q5VXM1 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
CDCP2Q5VXM1 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CDCP2Q5VXM1 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC18.26■□□□□ 0.51
CDCP2Q5VXM1 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC18.26■□□□□ 0.51
CDCP2Q5VXM1 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC18.26■□□□□ 0.51
CDCP2Q5VXM1 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CDCP2Q5VXM1 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CDCP2Q5VXM1 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CDCP2Q5VXM1 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CDCP2Q5VXM1 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC18.25■□□□□ 0.51
CDCP2Q5VXM1 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
CDCP2Q5VXM1 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC18.25■□□□□ 0.51
CDCP2Q5VXM1 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
CDCP2Q5VXM1 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
CDCP2Q5VXM1 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CDCP2Q5VXM1 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CDCP2Q5VXM1 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC18.25■□□□□ 0.51
CDCP2Q5VXM1 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
CDCP2Q5VXM1 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CDCP2Q5VXM1 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
CDCP2Q5VXM1 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CDCP2Q5VXM1 AL645929.1-201ENST00000420084 975 ntBASIC18.25■□□□□ 0.51
CDCP2Q5VXM1 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
CDCP2Q5VXM1 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
CDCP2Q5VXM1 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC18.25■□□□□ 0.51
CDCP2Q5VXM1 RASA4DP-201ENST00000460726 1199 ntBASIC18.25■□□□□ 0.51
CDCP2Q5VXM1 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC18.25■□□□□ 0.51
CDCP2Q5VXM1 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC18.25■□□□□ 0.51
CDCP2Q5VXM1 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC18.25■□□□□ 0.51
CDCP2Q5VXM1 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
CDCP2Q5VXM1 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
CDCP2Q5VXM1 AC092119.3-201ENST00000612618 583 ntBASIC18.25■□□□□ 0.51
CDCP2Q5VXM1 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC18.25■□□□□ 0.51
CDCP2Q5VXM1 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC18.25■□□□□ 0.51
CDCP2Q5VXM1 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
CDCP2Q5VXM1 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CDCP2Q5VXM1 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC18.25■□□□□ 0.51
CDCP2Q5VXM1 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
CDCP2Q5VXM1 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
CDCP2Q5VXM1 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CDCP2Q5VXM1 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC18.24■□□□□ 0.51
CDCP2Q5VXM1 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CDCP2Q5VXM1 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
CDCP2Q5VXM1 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
CDCP2Q5VXM1 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CDCP2Q5VXM1 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
CDCP2Q5VXM1 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
CDCP2Q5VXM1 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC18.24■□□□□ 0.51
CDCP2Q5VXM1 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CDCP2Q5VXM1 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC18.24■□□□□ 0.51
CDCP2Q5VXM1 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CDCP2Q5VXM1 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CDCP2Q5VXM1 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
CDCP2Q5VXM1 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CDCP2Q5VXM1 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CDCP2Q5VXM1 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CDCP2Q5VXM1 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC18.24■□□□□ 0.51
CDCP2Q5VXM1 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC18.24■□□□□ 0.51
CDCP2Q5VXM1 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC18.24■□□□□ 0.51
CDCP2Q5VXM1 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
CDCP2Q5VXM1 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CDCP2Q5VXM1 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CDCP2Q5VXM1 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC18.23■□□□□ 0.51
CDCP2Q5VXM1 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC18.23■□□□□ 0.51
CDCP2Q5VXM1 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CDCP2Q5VXM1 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC18.23■□□□□ 0.51
CDCP2Q5VXM1 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC18.23■□□□□ 0.51
CDCP2Q5VXM1 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
CDCP2Q5VXM1 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC18.23■□□□□ 0.51
CDCP2Q5VXM1 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 18.5 ms