Protein–RNA interactions for Protein: Q2M3G4

SHROOM1, Protein Shroom1, humanhuman

Predicted RBP Predictions only

Length 852 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1Q2M3G4 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC22.48■■□□□ 1.19
SHROOM1Q2M3G4 AC008622.2-201ENST00000617006 1229 ntBASIC22.48■■□□□ 1.19
SHROOM1Q2M3G4 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
SHROOM1Q2M3G4 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC22.48■■□□□ 1.19
SHROOM1Q2M3G4 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
SHROOM1Q2M3G4 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC22.48■■□□□ 1.19
SHROOM1Q2M3G4 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC22.48■■□□□ 1.19
SHROOM1Q2M3G4 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC22.48■■□□□ 1.19
SHROOM1Q2M3G4 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
SHROOM1Q2M3G4 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
SHROOM1Q2M3G4 AC125437.2-201ENST00000625180 2167 ntBASIC22.48■■□□□ 1.19
SHROOM1Q2M3G4 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
SHROOM1Q2M3G4 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
SHROOM1Q2M3G4 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC22.47■■□□□ 1.19
SHROOM1Q2M3G4 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
SHROOM1Q2M3G4 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
SHROOM1Q2M3G4 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
SHROOM1Q2M3G4 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC22.47■■□□□ 1.19
SHROOM1Q2M3G4 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC22.47■■□□□ 1.19
SHROOM1Q2M3G4 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
SHROOM1Q2M3G4 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
SHROOM1Q2M3G4 UPK3BP1-201ENST00000428678 509 ntBASIC22.47■■□□□ 1.19
SHROOM1Q2M3G4 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC22.47■■□□□ 1.19
SHROOM1Q2M3G4 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC22.47■■□□□ 1.19
SHROOM1Q2M3G4 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC22.47■■□□□ 1.19
SHROOM1Q2M3G4 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC22.47■■□□□ 1.19
SHROOM1Q2M3G4 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC22.47■■□□□ 1.19
SHROOM1Q2M3G4 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
SHROOM1Q2M3G4 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC22.47■■□□□ 1.19
SHROOM1Q2M3G4 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
SHROOM1Q2M3G4 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC22.47■■□□□ 1.19
SHROOM1Q2M3G4 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
SHROOM1Q2M3G4 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
SHROOM1Q2M3G4 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
SHROOM1Q2M3G4 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
SHROOM1Q2M3G4 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC22.46■■□□□ 1.19
SHROOM1Q2M3G4 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC22.46■■□□□ 1.19
SHROOM1Q2M3G4 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC22.46■■□□□ 1.19
SHROOM1Q2M3G4 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
SHROOM1Q2M3G4 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC22.46■■□□□ 1.19
SHROOM1Q2M3G4 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC22.46■■□□□ 1.19
SHROOM1Q2M3G4 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC22.46■■□□□ 1.19
SHROOM1Q2M3G4 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
SHROOM1Q2M3G4 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC22.46■■□□□ 1.19
SHROOM1Q2M3G4 BET1L-202ENST00000332865 533 ntTSL 5 BASIC22.46■■□□□ 1.19
SHROOM1Q2M3G4 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
SHROOM1Q2M3G4 AC009947.2-201ENST00000444014 672 ntBASIC22.46■■□□□ 1.19
SHROOM1Q2M3G4 AC092647.4-201ENST00000457211 535 ntBASIC22.46■■□□□ 1.19
SHROOM1Q2M3G4 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC22.46■■□□□ 1.19
SHROOM1Q2M3G4 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC22.46■■□□□ 1.19
SHROOM1Q2M3G4 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC22.46■■□□□ 1.19
SHROOM1Q2M3G4 DFFB-212ENST00000625756 649 ntTSL 5 BASIC22.46■■□□□ 1.19
SHROOM1Q2M3G4 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC22.46■■□□□ 1.19
SHROOM1Q2M3G4 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
SHROOM1Q2M3G4 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
SHROOM1Q2M3G4 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC22.46■■□□□ 1.19
SHROOM1Q2M3G4 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
SHROOM1Q2M3G4 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.19
SHROOM1Q2M3G4 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC22.45■■□□□ 1.19
SHROOM1Q2M3G4 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
SHROOM1Q2M3G4 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC22.45■■□□□ 1.18
SHROOM1Q2M3G4 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC22.45■■□□□ 1.18
SHROOM1Q2M3G4 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC22.45■■□□□ 1.18
SHROOM1Q2M3G4 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC22.45■■□□□ 1.18
SHROOM1Q2M3G4 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC22.45■■□□□ 1.18
SHROOM1Q2M3G4 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
SHROOM1Q2M3G4 FAM86EP-206ENST00000510506 987 ntBASIC22.45■■□□□ 1.18
SHROOM1Q2M3G4 PRSS44-201ENST00000515154 1146 ntBASIC22.45■■□□□ 1.18
SHROOM1Q2M3G4 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC22.45■■□□□ 1.18
SHROOM1Q2M3G4 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
SHROOM1Q2M3G4 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
SHROOM1Q2M3G4 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
SHROOM1Q2M3G4 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
SHROOM1Q2M3G4 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
SHROOM1Q2M3G4 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
SHROOM1Q2M3G4 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC22.44■■□□□ 1.18
SHROOM1Q2M3G4 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
SHROOM1Q2M3G4 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
SHROOM1Q2M3G4 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC22.44■■□□□ 1.18
SHROOM1Q2M3G4 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
SHROOM1Q2M3G4 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC22.44■■□□□ 1.18
SHROOM1Q2M3G4 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC22.44■■□□□ 1.18
SHROOM1Q2M3G4 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
SHROOM1Q2M3G4 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
SHROOM1Q2M3G4 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC22.44■■□□□ 1.18
SHROOM1Q2M3G4 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC22.44■■□□□ 1.18
SHROOM1Q2M3G4 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
SHROOM1Q2M3G4 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC22.44■■□□□ 1.18
SHROOM1Q2M3G4 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC22.44■■□□□ 1.18
SHROOM1Q2M3G4 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
SHROOM1Q2M3G4 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC22.44■■□□□ 1.18
SHROOM1Q2M3G4 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC22.44■■□□□ 1.18
SHROOM1Q2M3G4 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC22.43■■□□□ 1.18
SHROOM1Q2M3G4 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC22.43■■□□□ 1.18
SHROOM1Q2M3G4 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
SHROOM1Q2M3G4 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
SHROOM1Q2M3G4 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC22.43■■□□□ 1.18
SHROOM1Q2M3G4 BUB3-202ENST00000368859 667 ntTSL 3 BASIC22.43■■□□□ 1.18
SHROOM1Q2M3G4 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
SHROOM1Q2M3G4 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
Retrieved 100 of 98,524 protein–RNA pairs in 52.6 ms