Protein–RNA interactions for Protein: P58304

VSX2, Visual system homeobox 2, humanhuman

Predicted RBP Predictions only

Length 361 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VSX2P58304 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
VSX2P58304 AC104417.2-201ENST00000562989 1793 ntBASIC18.4■□□□□ 0.54
VSX2P58304 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
VSX2P58304 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
VSX2P58304 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
VSX2P58304 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
VSX2P58304 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC18.4■□□□□ 0.54
VSX2P58304 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC18.4■□□□□ 0.54
VSX2P58304 MIR1238-201ENST00000408483 83 ntBASIC18.4■□□□□ 0.54
VSX2P58304 AC091390.4-202ENST00000476426 537 ntBASIC18.4■□□□□ 0.54
VSX2P58304 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC18.4■□□□□ 0.54
VSX2P58304 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC18.4■□□□□ 0.54
VSX2P58304 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC18.4■□□□□ 0.54
VSX2P58304 ARL16-209ENST00000573715 763 ntTSL 3 BASIC18.4■□□□□ 0.54
VSX2P58304 ARL16-211ENST00000576135 694 ntTSL 3 BASIC18.4■□□□□ 0.54
VSX2P58304 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC18.4■□□□□ 0.54
VSX2P58304 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC18.4■□□□□ 0.54
VSX2P58304 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC18.4■□□□□ 0.54
VSX2P58304 AC130371.2-201ENST00000619443 611 ntBASIC18.4■□□□□ 0.54
VSX2P58304 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
VSX2P58304 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC18.4■□□□□ 0.54
VSX2P58304 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC18.4■□□□□ 0.54
VSX2P58304 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC18.4■□□□□ 0.54
VSX2P58304 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC18.4■□□□□ 0.54
VSX2P58304 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
VSX2P58304 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
VSX2P58304 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
VSX2P58304 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.54
VSX2P58304 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
VSX2P58304 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
VSX2P58304 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
VSX2P58304 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
VSX2P58304 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
VSX2P58304 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
VSX2P58304 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
VSX2P58304 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
VSX2P58304 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
VSX2P58304 DERL1-203ENST00000419562 918 ntTSL 2 BASIC18.39■□□□□ 0.53
VSX2P58304 AL390955.1-201ENST00000428694 934 ntBASIC18.39■□□□□ 0.53
VSX2P58304 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC18.39■□□□□ 0.53
VSX2P58304 AC008040.2-201ENST00000461049 708 ntBASIC18.39■□□□□ 0.53
VSX2P58304 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC18.39■□□□□ 0.53
VSX2P58304 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
VSX2P58304 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC18.39■□□□□ 0.53
VSX2P58304 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC18.39■□□□□ 0.53
VSX2P58304 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
VSX2P58304 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
VSX2P58304 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC18.39■□□□□ 0.53
VSX2P58304 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC18.39■□□□□ 0.53
VSX2P58304 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
VSX2P58304 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
VSX2P58304 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
VSX2P58304 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC18.39■□□□□ 0.53
VSX2P58304 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
VSX2P58304 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC18.39■□□□□ 0.53
VSX2P58304 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
VSX2P58304 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
VSX2P58304 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC18.38■□□□□ 0.53
VSX2P58304 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
VSX2P58304 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
VSX2P58304 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
VSX2P58304 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC18.38■□□□□ 0.53
VSX2P58304 MMP23A-201ENST00000234610 1017 ntBASIC18.38■□□□□ 0.53
VSX2P58304 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC18.38■□□□□ 0.53
VSX2P58304 FAM207BP-201ENST00000447172 505 ntBASIC18.38■□□□□ 0.53
VSX2P58304 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
VSX2P58304 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC18.38■□□□□ 0.53
VSX2P58304 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
VSX2P58304 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC18.38■□□□□ 0.53
VSX2P58304 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
VSX2P58304 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
VSX2P58304 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC18.38■□□□□ 0.53
VSX2P58304 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
VSX2P58304 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
VSX2P58304 MCC-208ENST00000514701 2855 ntTSL 2 BASIC18.38■□□□□ 0.53
VSX2P58304 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
VSX2P58304 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC18.38■□□□□ 0.53
VSX2P58304 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC18.38■□□□□ 0.53
VSX2P58304 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
VSX2P58304 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC18.38■□□□□ 0.53
VSX2P58304 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
VSX2P58304 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
VSX2P58304 ADM-207ENST00000530439 1839 ntTSL 2 BASIC18.37■□□□□ 0.53
VSX2P58304 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
VSX2P58304 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
VSX2P58304 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC18.37■□□□□ 0.53
VSX2P58304 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
VSX2P58304 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
VSX2P58304 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
VSX2P58304 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
VSX2P58304 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
VSX2P58304 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC18.37■□□□□ 0.53
VSX2P58304 AC097488.1-201ENST00000507834 756 ntBASIC18.37■□□□□ 0.53
VSX2P58304 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC18.37■□□□□ 0.53
VSX2P58304 SLC25A1P4-201ENST00000567977 778 ntBASIC18.37■□□□□ 0.53
VSX2P58304 GRAMD4P8-201ENST00000605465 1115 ntBASIC18.37■□□□□ 0.53
VSX2P58304 DGCR10-201ENST00000609839 495 ntBASIC18.37■□□□□ 0.53
VSX2P58304 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
VSX2P58304 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
VSX2P58304 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC18.37■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 19.5 ms