Protein–RNA interactions for Protein: P52945

PDX1, Pancreas/duodenum homeobox protein 1, humanhuman

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDX1P52945 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC18.68■□□□□ 0.58
PDX1P52945 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC18.68■□□□□ 0.58
PDX1P52945 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC18.68■□□□□ 0.58
PDX1P52945 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC18.68■□□□□ 0.58
PDX1P52945 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PDX1P52945 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PDX1P52945 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
PDX1P52945 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC18.68■□□□□ 0.58
PDX1P52945 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC18.67■□□□□ 0.58
PDX1P52945 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC18.67■□□□□ 0.58
PDX1P52945 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
PDX1P52945 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
PDX1P52945 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
PDX1P52945 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC18.67■□□□□ 0.58
PDX1P52945 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC18.67■□□□□ 0.58
PDX1P52945 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
PDX1P52945 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
PDX1P52945 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
PDX1P52945 ISCU-203ENST00000431221 799 ntTSL 2 BASIC18.67■□□□□ 0.58
PDX1P52945 AC091390.4-202ENST00000476426 537 ntBASIC18.67■□□□□ 0.58
PDX1P52945 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC18.67■□□□□ 0.58
PDX1P52945 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC18.67■□□□□ 0.58
PDX1P52945 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC18.67■□□□□ 0.58
PDX1P52945 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC18.67■□□□□ 0.58
PDX1P52945 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
PDX1P52945 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
PDX1P52945 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
PDX1P52945 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC18.67■□□□□ 0.58
PDX1P52945 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
PDX1P52945 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
PDX1P52945 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC18.67■□□□□ 0.58
PDX1P52945 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC18.66■□□□□ 0.58
PDX1P52945 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC18.66■□□□□ 0.58
PDX1P52945 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
PDX1P52945 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
PDX1P52945 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
PDX1P52945 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
PDX1P52945 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
PDX1P52945 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
PDX1P52945 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
PDX1P52945 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
PDX1P52945 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
PDX1P52945 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC18.66■□□□□ 0.58
PDX1P52945 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC18.66■□□□□ 0.58
PDX1P52945 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC18.66■□□□□ 0.58
PDX1P52945 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC18.66■□□□□ 0.58
PDX1P52945 AC139887.4-201ENST00000607877 719 ntBASIC18.66■□□□□ 0.58
PDX1P52945 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
PDX1P52945 AC116562.4-202ENST00000641738 218 ntBASIC18.66■□□□□ 0.58
PDX1P52945 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
PDX1P52945 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC18.66■□□□□ 0.58
PDX1P52945 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
PDX1P52945 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
PDX1P52945 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
PDX1P52945 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
PDX1P52945 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC18.65■□□□□ 0.58
PDX1P52945 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
PDX1P52945 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
PDX1P52945 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
PDX1P52945 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC18.65■□□□□ 0.58
PDX1P52945 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
PDX1P52945 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
PDX1P52945 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
PDX1P52945 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC18.65■□□□□ 0.58
PDX1P52945 FAM8A6P-201ENST00000407496 1135 ntBASIC18.65■□□□□ 0.58
PDX1P52945 SLC25A1P2-201ENST00000430693 912 ntBASIC18.65■□□□□ 0.58
PDX1P52945 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC18.65■□□□□ 0.58
PDX1P52945 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
PDX1P52945 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC18.65■□□□□ 0.58
PDX1P52945 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
PDX1P52945 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
PDX1P52945 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
PDX1P52945 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
PDX1P52945 BID-204ENST00000399767 2129 ntTSL 2 BASIC18.65■□□□□ 0.58
PDX1P52945 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
PDX1P52945 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
PDX1P52945 AC092338.2-201ENST00000568827 1415 ntBASIC18.65■□□□□ 0.58
PDX1P52945 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
PDX1P52945 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
PDX1P52945 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC18.65■□□□□ 0.58
PDX1P52945 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC18.65■□□□□ 0.58
PDX1P52945 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
PDX1P52945 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC18.64■□□□□ 0.58
PDX1P52945 BX119927.1-201ENST00000636596 1552 ntBASIC18.64■□□□□ 0.58
PDX1P52945 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
PDX1P52945 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
PDX1P52945 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
PDX1P52945 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
PDX1P52945 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
PDX1P52945 AC007663.1-201ENST00000438948 1240 ntBASIC18.64■□□□□ 0.57
PDX1P52945 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC18.64■□□□□ 0.57
PDX1P52945 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC18.64■□□□□ 0.57
PDX1P52945 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC18.64■□□□□ 0.57
PDX1P52945 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC18.64■□□□□ 0.57
PDX1P52945 AL358472.4-201ENST00000633140 710 ntBASIC18.64■□□□□ 0.57
PDX1P52945 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
PDX1P52945 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
PDX1P52945 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
PDX1P52945 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC18.64■□□□□ 0.57
PDX1P52945 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 33.3 ms