Protein–RNA interactions for Protein: P51800

CLCNKA, Chloride channel protein ClC-Ka, humanhuman

Predictions only

Length 687 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKAP51800 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CLCNKAP51800 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CLCNKAP51800 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CLCNKAP51800 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
CLCNKAP51800 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC18.87■□□□□ 0.61
CLCNKAP51800 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CLCNKAP51800 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC18.87■□□□□ 0.61
CLCNKAP51800 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CLCNKAP51800 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CLCNKAP51800 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC18.87■□□□□ 0.61
CLCNKAP51800 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CLCNKAP51800 ECEL1P3-201ENST00000427961 737 ntBASIC18.87■□□□□ 0.61
CLCNKAP51800 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
CLCNKAP51800 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC18.87■□□□□ 0.61
CLCNKAP51800 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CLCNKAP51800 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
CLCNKAP51800 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
CLCNKAP51800 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CLCNKAP51800 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC18.87■□□□□ 0.61
CLCNKAP51800 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC18.87■□□□□ 0.61
CLCNKAP51800 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC18.87■□□□□ 0.61
CLCNKAP51800 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CLCNKAP51800 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
CLCNKAP51800 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
CLCNKAP51800 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CLCNKAP51800 AC104417.2-201ENST00000562989 1793 ntBASIC18.86■□□□□ 0.61
CLCNKAP51800 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CLCNKAP51800 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC18.86■□□□□ 0.61
CLCNKAP51800 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CLCNKAP51800 KRT8P9-201ENST00000558927 1449 ntBASIC18.86■□□□□ 0.61
CLCNKAP51800 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CLCNKAP51800 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CLCNKAP51800 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC18.86■□□□□ 0.61
CLCNKAP51800 NAPSB-206ENST00000562112 1266 ntBASIC18.86■□□□□ 0.61
CLCNKAP51800 AC145285.6-201ENST00000604632 637 ntBASIC18.86■□□□□ 0.61
CLCNKAP51800 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CLCNKAP51800 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CLCNKAP51800 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
CLCNKAP51800 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CLCNKAP51800 ADM-207ENST00000530439 1839 ntTSL 2 BASIC18.86■□□□□ 0.61
CLCNKAP51800 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC18.86■□□□□ 0.61
CLCNKAP51800 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC18.86■□□□□ 0.61
CLCNKAP51800 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CLCNKAP51800 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CLCNKAP51800 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC18.85■□□□□ 0.61
CLCNKAP51800 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC18.85■□□□□ 0.61
CLCNKAP51800 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC18.85■□□□□ 0.61
CLCNKAP51800 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CLCNKAP51800 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC18.85■□□□□ 0.61
CLCNKAP51800 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CLCNKAP51800 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
CLCNKAP51800 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
CLCNKAP51800 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
CLCNKAP51800 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
CLCNKAP51800 AL390955.1-201ENST00000428694 934 ntBASIC18.85■□□□□ 0.61
CLCNKAP51800 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC18.85■□□□□ 0.61
CLCNKAP51800 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC18.85■□□□□ 0.61
CLCNKAP51800 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC18.85■□□□□ 0.61
CLCNKAP51800 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC18.85■□□□□ 0.61
CLCNKAP51800 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC18.85■□□□□ 0.61
CLCNKAP51800 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CLCNKAP51800 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC18.84■□□□□ 0.61
CLCNKAP51800 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CLCNKAP51800 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC18.84■□□□□ 0.61
CLCNKAP51800 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
CLCNKAP51800 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CLCNKAP51800 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CLCNKAP51800 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CLCNKAP51800 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CLCNKAP51800 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CLCNKAP51800 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
CLCNKAP51800 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
CLCNKAP51800 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CLCNKAP51800 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC18.84■□□□□ 0.61
CLCNKAP51800 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC18.84■□□□□ 0.61
CLCNKAP51800 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC18.84■□□□□ 0.61
CLCNKAP51800 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CLCNKAP51800 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC18.84■□□□□ 0.61
CLCNKAP51800 SLC25A1P4-201ENST00000567977 778 ntBASIC18.84■□□□□ 0.61
CLCNKAP51800 AC010947.1-201ENST00000623454 693 ntBASIC18.84■□□□□ 0.61
CLCNKAP51800 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC18.84■□□□□ 0.61
CLCNKAP51800 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CLCNKAP51800 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
CLCNKAP51800 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CLCNKAP51800 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC18.84■□□□□ 0.61
CLCNKAP51800 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
CLCNKAP51800 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC18.83■□□□□ 0.61
CLCNKAP51800 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
CLCNKAP51800 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
CLCNKAP51800 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
CLCNKAP51800 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
CLCNKAP51800 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
CLCNKAP51800 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC18.83■□□□□ 0.61
CLCNKAP51800 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
CLCNKAP51800 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC18.83■□□□□ 0.61
CLCNKAP51800 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CLCNKAP51800 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC18.83■□□□□ 0.6
CLCNKAP51800 TSPY14P-201ENST00000303979 915 ntBASIC18.83■□□□□ 0.6
CLCNKAP51800 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
CLCNKAP51800 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 53.3 ms