Protein–RNA interactions for Protein: P46100

ATRX, Transcriptional regulator ATRX, humanhuman

Predictions only

Length 2,492 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATRXP46100 NMU-202ENST00000505262 693 ntTSL 3 BASIC17.58■□□□□ 0.4
ATRXP46100 CIB2-208ENST00000560618 804 ntTSL 2 BASIC17.58■□□□□ 0.4
ATRXP46100 IFT20-209ENST00000579419 787 ntAPPRIS ALT1 TSL 3 BASIC17.58■□□□□ 0.4
ATRXP46100 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
ATRXP46100 WDR6-223ENST00000627177 207 ntTSL 2 BASIC17.58■□□□□ 0.4
ATRXP46100 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC17.58■□□□□ 0.4
ATRXP46100 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC17.57■□□□□ 0.4
ATRXP46100 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
ATRXP46100 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC17.57■□□□□ 0.4
ATRXP46100 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC17.57■□□□□ 0.4
ATRXP46100 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC17.57■□□□□ 0.4
ATRXP46100 ILF2-202ENST00000368681 726 ntTSL 2 BASIC17.57■□□□□ 0.4
ATRXP46100 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC17.57■□□□□ 0.4
ATRXP46100 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
ATRXP46100 RBM7-207ENST00000544582 692 ntTSL 3 BASIC17.57■□□□□ 0.4
ATRXP46100 MIR1199-201ENST00000621445 119 ntBASIC17.57■□□□□ 0.4
ATRXP46100 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
ATRXP46100 TBC1D3P2-202ENST00000577902 1649 ntBASIC17.57■□□□□ 0.4
ATRXP46100 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
ATRXP46100 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
ATRXP46100 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
ATRXP46100 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
ATRXP46100 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC17.57■□□□□ 0.4
ATRXP46100 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC17.57■□□□□ 0.4
ATRXP46100 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
ATRXP46100 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
ATRXP46100 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
ATRXP46100 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
ATRXP46100 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
ATRXP46100 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC17.57■□□□□ 0.4
ATRXP46100 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC17.57■□□□□ 0.4
ATRXP46100 SPCS2P1-201ENST00000561636 679 ntBASIC17.57■□□□□ 0.4
ATRXP46100 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC17.57■□□□□ 0.4
ATRXP46100 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC17.57■□□□□ 0.4
ATRXP46100 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
ATRXP46100 ECEL1P1-201ENST00000373592 1742 ntBASIC17.56■□□□□ 0.4
ATRXP46100 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
ATRXP46100 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
ATRXP46100 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC17.56■□□□□ 0.4
ATRXP46100 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
ATRXP46100 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC17.56■□□□□ 0.4
ATRXP46100 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
ATRXP46100 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
ATRXP46100 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC17.56■□□□□ 0.4
ATRXP46100 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
ATRXP46100 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
ATRXP46100 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
ATRXP46100 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
ATRXP46100 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC17.56■□□□□ 0.4
ATRXP46100 LBH-203ENST00000404397 543 ntTSL 4 BASIC17.56■□□□□ 0.4
ATRXP46100 LBH-204ENST00000406087 559 ntTSL 4 BASIC17.56■□□□□ 0.4
ATRXP46100 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC17.56■□□□□ 0.4
ATRXP46100 HLA-F-220ENST00000434407 884 ntBASIC17.56■□□□□ 0.4
ATRXP46100 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
ATRXP46100 AC136475.3-203ENST00000525217 617 ntTSL 2 BASIC17.56■□□□□ 0.4
ATRXP46100 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
ATRXP46100 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC17.56■□□□□ 0.4
ATRXP46100 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
ATRXP46100 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC17.56■□□□□ 0.4
ATRXP46100 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
ATRXP46100 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
ATRXP46100 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
ATRXP46100 PARN-205ENST00000539279 1557 ntTSL 2 BASIC17.55■□□□□ 0.4
ATRXP46100 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
ATRXP46100 KRT16P6-202ENST00000425692 1426 ntBASIC17.55■□□□□ 0.4
ATRXP46100 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
ATRXP46100 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC17.55■□□□□ 0.4
ATRXP46100 AC211486.1-202ENST00000416371 468 ntBASIC17.55■□□□□ 0.4
ATRXP46100 WDR53-203ENST00000429115 683 ntTSL 2 BASIC17.55■□□□□ 0.4
ATRXP46100 AC211476.1-201ENST00000503899 468 ntBASIC17.55■□□□□ 0.4
ATRXP46100 MUTYH-237ENST00000531105 501 ntTSL 5 BASIC17.55■□□□□ 0.4
ATRXP46100 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC17.55■□□□□ 0.4
ATRXP46100 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
ATRXP46100 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC17.55■□□□□ 0.4
ATRXP46100 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
ATRXP46100 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC17.55■□□□□ 0.4
ATRXP46100 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC17.55■□□□□ 0.4
ATRXP46100 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
ATRXP46100 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC17.55■□□□□ 0.4
ATRXP46100 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
ATRXP46100 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC17.55■□□□□ 0.4
ATRXP46100 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC17.55■□□□□ 0.4
ATRXP46100 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC17.55■□□□□ 0.4
ATRXP46100 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
ATRXP46100 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
ATRXP46100 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
ATRXP46100 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
ATRXP46100 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC17.55■□□□□ 0.4
ATRXP46100 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
ATRXP46100 PNN-202ENST00000553331 656 ntTSL 3 BASIC17.55■□□□□ 0.4
ATRXP46100 MIR3687-2-201ENST00000577708 61 ntBASIC17.55■□□□□ 0.4
ATRXP46100 MIR3687-1-201ENST00000614492 61 ntBASIC17.55■□□□□ 0.4
ATRXP46100 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
ATRXP46100 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
ATRXP46100 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC17.54■□□□□ 0.4
ATRXP46100 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC17.54■□□□□ 0.4
ATRXP46100 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC17.54■□□□□ 0.4
ATRXP46100 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
ATRXP46100 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC17.54■□□□□ 0.4
ATRXP46100 GREM1-201ENST00000560677 623 ntTSL 4 BASIC17.54■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 26.5 ms