Protein–RNA interactions for Protein: P07858

CTSB, Cathepsin B, humanhuman

Predictions only

Length 339 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSBP07858 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
CTSBP07858 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC18.25■□□□□ 0.51
CTSBP07858 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC18.25■□□□□ 0.51
CTSBP07858 P4HB-223ENST00000576390 439 ntTSL 4 BASIC18.25■□□□□ 0.51
CTSBP07858 FAM87A-204ENST00000613235 858 ntBASIC18.25■□□□□ 0.51
CTSBP07858 AC005363.2-201ENST00000618631 242 ntBASIC18.25■□□□□ 0.51
CTSBP07858 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC18.25■□□□□ 0.51
CTSBP07858 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CTSBP07858 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC18.25■□□□□ 0.51
CTSBP07858 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC18.25■□□□□ 0.51
CTSBP07858 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC18.25■□□□□ 0.51
CTSBP07858 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC18.24■□□□□ 0.51
CTSBP07858 KRT18P22-201ENST00000402024 1347 ntBASIC18.24■□□□□ 0.51
CTSBP07858 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC18.24■□□□□ 0.51
CTSBP07858 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC18.24■□□□□ 0.51
CTSBP07858 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CTSBP07858 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC18.24■□□□□ 0.51
CTSBP07858 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CTSBP07858 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
CTSBP07858 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC18.24■□□□□ 0.51
CTSBP07858 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
CTSBP07858 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
CTSBP07858 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
CTSBP07858 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC18.24■□□□□ 0.51
CTSBP07858 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC18.24■□□□□ 0.51
CTSBP07858 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC18.24■□□□□ 0.51
CTSBP07858 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
CTSBP07858 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC18.24■□□□□ 0.51
CTSBP07858 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC18.24■□□□□ 0.51
CTSBP07858 SLC25A3P1-201ENST00000443844 931 ntBASIC18.24■□□□□ 0.51
CTSBP07858 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC18.24■□□□□ 0.51
CTSBP07858 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC18.24■□□□□ 0.51
CTSBP07858 EGLN1P1-201ENST00000531623 762 ntBASIC18.24■□□□□ 0.51
CTSBP07858 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC18.24■□□□□ 0.51
CTSBP07858 C2orf69P3-201ENST00000565542 1120 ntBASIC18.24■□□□□ 0.51
CTSBP07858 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC18.24■□□□□ 0.51
CTSBP07858 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
CTSBP07858 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
CTSBP07858 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
CTSBP07858 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CTSBP07858 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
CTSBP07858 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
CTSBP07858 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC18.24■□□□□ 0.51
CTSBP07858 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
CTSBP07858 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CTSBP07858 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CTSBP07858 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CTSBP07858 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC18.23■□□□□ 0.51
CTSBP07858 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC18.23■□□□□ 0.51
CTSBP07858 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
CTSBP07858 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
CTSBP07858 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC18.23■□□□□ 0.51
CTSBP07858 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
CTSBP07858 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CTSBP07858 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
CTSBP07858 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC18.23■□□□□ 0.51
CTSBP07858 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CTSBP07858 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
CTSBP07858 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CTSBP07858 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
CTSBP07858 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
CTSBP07858 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CTSBP07858 TERF1P1-201ENST00000311003 1181 ntBASIC18.23■□□□□ 0.51
CTSBP07858 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CTSBP07858 TSPY23P-201ENST00000440136 739 ntBASIC18.23■□□□□ 0.51
CTSBP07858 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC18.23■□□□□ 0.51
CTSBP07858 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC18.23■□□□□ 0.51
CTSBP07858 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CTSBP07858 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CTSBP07858 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
CTSBP07858 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
CTSBP07858 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
CTSBP07858 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CTSBP07858 AC073508.3-201ENST00000619697 1419 ntBASIC18.23■□□□□ 0.51
CTSBP07858 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC18.23■□□□□ 0.51
CTSBP07858 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC18.23■□□□□ 0.51
CTSBP07858 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
CTSBP07858 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CTSBP07858 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC18.22■□□□□ 0.51
CTSBP07858 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CTSBP07858 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CTSBP07858 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC18.22■□□□□ 0.51
CTSBP07858 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CTSBP07858 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CTSBP07858 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC18.22■□□□□ 0.51
CTSBP07858 AC113347.1-201ENST00000413321 391 ntBASIC18.22■□□□□ 0.51
CTSBP07858 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC18.22■□□□□ 0.51
CTSBP07858 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC18.22■□□□□ 0.51
CTSBP07858 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC18.22■□□□□ 0.51
CTSBP07858 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
CTSBP07858 AL023803.3-201ENST00000615559 522 ntBASIC18.22■□□□□ 0.51
CTSBP07858 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CTSBP07858 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
CTSBP07858 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
CTSBP07858 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC18.22■□□□□ 0.51
CTSBP07858 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC18.22■□□□□ 0.51
CTSBP07858 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC18.22■□□□□ 0.51
CTSBP07858 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CTSBP07858 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC18.21■□□□□ 0.51
CTSBP07858 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms