Protein–RNA interactions for Protein: P01127

PDGFB, Platelet-derived growth factor subunit B, humanhuman

Predicted RBP Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFBP01127 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
PDGFBP01127 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
PDGFBP01127 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
PDGFBP01127 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC19.36■□□□□ 0.69
PDGFBP01127 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC19.36■□□□□ 0.69
PDGFBP01127 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
PDGFBP01127 IL9RP2-201ENST00000423948 1312 ntBASIC19.36■□□□□ 0.69
PDGFBP01127 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC19.36■□□□□ 0.69
PDGFBP01127 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC19.36■□□□□ 0.69
PDGFBP01127 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
PDGFBP01127 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
PDGFBP01127 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC19.36■□□□□ 0.69
PDGFBP01127 MIR1233-2-201ENST00000408138 82 ntBASIC19.36■□□□□ 0.69
PDGFBP01127 MIR1233-1-201ENST00000408722 82 ntBASIC19.36■□□□□ 0.69
PDGFBP01127 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC19.36■□□□□ 0.69
PDGFBP01127 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC19.36■□□□□ 0.69
PDGFBP01127 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
PDGFBP01127 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC19.36■□□□□ 0.69
PDGFBP01127 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC19.36■□□□□ 0.69
PDGFBP01127 AL353801.3-201ENST00000609898 542 ntBASIC19.36■□□□□ 0.69
PDGFBP01127 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
PDGFBP01127 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
PDGFBP01127 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC19.36■□□□□ 0.69
PDGFBP01127 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC19.36■□□□□ 0.69
PDGFBP01127 AC092720.2-201ENST00000602388 1665 ntBASIC19.36■□□□□ 0.69
PDGFBP01127 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
PDGFBP01127 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC19.35■□□□□ 0.69
PDGFBP01127 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC19.35■□□□□ 0.69
PDGFBP01127 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
PDGFBP01127 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
PDGFBP01127 AKR1C7P-201ENST00000305623 895 ntBASIC19.35■□□□□ 0.69
PDGFBP01127 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
PDGFBP01127 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC19.35■□□□□ 0.69
PDGFBP01127 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC19.35■□□□□ 0.69
PDGFBP01127 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
PDGFBP01127 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC19.35■□□□□ 0.69
PDGFBP01127 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
PDGFBP01127 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC19.35■□□□□ 0.69
PDGFBP01127 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC19.35■□□□□ 0.69
PDGFBP01127 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
PDGFBP01127 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC19.35■□□□□ 0.69
PDGFBP01127 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
PDGFBP01127 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
PDGFBP01127 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
PDGFBP01127 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC19.35■□□□□ 0.69
PDGFBP01127 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC19.34■□□□□ 0.69
PDGFBP01127 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
PDGFBP01127 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
PDGFBP01127 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
PDGFBP01127 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC19.34■□□□□ 0.69
PDGFBP01127 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
PDGFBP01127 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC19.34■□□□□ 0.69
PDGFBP01127 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
PDGFBP01127 HLA-F-220ENST00000434407 884 ntBASIC19.34■□□□□ 0.69
PDGFBP01127 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC19.34■□□□□ 0.69
PDGFBP01127 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
PDGFBP01127 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC19.34■□□□□ 0.69
PDGFBP01127 TPM1-218ENST00000559281 851 ntTSL 5 BASIC19.34■□□□□ 0.69
PDGFBP01127 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC19.34■□□□□ 0.69
PDGFBP01127 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC19.34■□□□□ 0.69
PDGFBP01127 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC19.34■□□□□ 0.69
PDGFBP01127 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC19.34■□□□□ 0.69
PDGFBP01127 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
PDGFBP01127 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
PDGFBP01127 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
PDGFBP01127 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
PDGFBP01127 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
PDGFBP01127 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
PDGFBP01127 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.68
PDGFBP01127 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC19.33■□□□□ 0.68
PDGFBP01127 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.68
PDGFBP01127 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC19.33■□□□□ 0.68
PDGFBP01127 AC104819.1-201ENST00000504587 486 ntBASIC19.33■□□□□ 0.68
PDGFBP01127 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC19.33■□□□□ 0.68
PDGFBP01127 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC19.33■□□□□ 0.68
PDGFBP01127 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC19.33■□□□□ 0.68
PDGFBP01127 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
PDGFBP01127 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
PDGFBP01127 LINC00167-201ENST00000530583 1419 ntBASIC19.33■□□□□ 0.68
PDGFBP01127 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.68
PDGFBP01127 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
PDGFBP01127 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.68
PDGFBP01127 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
PDGFBP01127 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC19.32■□□□□ 0.68
PDGFBP01127 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
PDGFBP01127 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
PDGFBP01127 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
PDGFBP01127 MIR662-201ENST00000384847 95 ntBASIC19.32■□□□□ 0.68
PDGFBP01127 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
PDGFBP01127 RNA5SP419-201ENST00000515908 135 ntBASIC19.32■□□□□ 0.68
PDGFBP01127 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
PDGFBP01127 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC19.32■□□□□ 0.68
PDGFBP01127 AC074051.2-201ENST00000565115 352 ntBASIC19.32■□□□□ 0.68
PDGFBP01127 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC19.32■□□□□ 0.68
PDGFBP01127 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC19.32■□□□□ 0.68
PDGFBP01127 AL157888.1-201ENST00000631930 593 ntBASIC19.32■□□□□ 0.68
PDGFBP01127 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC19.32■□□□□ 0.68
PDGFBP01127 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC19.31■□□□□ 0.68
PDGFBP01127 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
PDGFBP01127 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC19.31■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 20.3 ms