Protein–RNA interactions for Protein: P01033

TIMP1, Metalloproteinase inhibitor 1, humanhuman

Predictions only

Length 207 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP1P01033 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC20.83■□□□□ 0.92
TIMP1P01033 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
TIMP1P01033 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC20.83■□□□□ 0.92
TIMP1P01033 AC079834.2-201ENST00000609776 1949 ntBASIC20.82■□□□□ 0.92
TIMP1P01033 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
TIMP1P01033 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC20.82■□□□□ 0.92
TIMP1P01033 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
TIMP1P01033 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
TIMP1P01033 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
TIMP1P01033 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
TIMP1P01033 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC20.82■□□□□ 0.92
TIMP1P01033 AP000593.1-201ENST00000393668 712 ntBASIC20.82■□□□□ 0.92
TIMP1P01033 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC20.82■□□□□ 0.92
TIMP1P01033 HLA-F-220ENST00000434407 884 ntBASIC20.82■□□□□ 0.92
TIMP1P01033 DRAXINP1-201ENST00000437611 948 ntBASIC20.82■□□□□ 0.92
TIMP1P01033 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC20.82■□□□□ 0.92
TIMP1P01033 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
TIMP1P01033 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC20.82■□□□□ 0.92
TIMP1P01033 PNN-202ENST00000553331 656 ntTSL 3 BASIC20.82■□□□□ 0.92
TIMP1P01033 LINC01711-201ENST00000598340 967 ntBASIC20.82■□□□□ 0.92
TIMP1P01033 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC20.82■□□□□ 0.92
TIMP1P01033 AC079602.3-201ENST00000623931 403 ntBASIC20.82■□□□□ 0.92
TIMP1P01033 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
TIMP1P01033 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
TIMP1P01033 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
TIMP1P01033 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC20.82■□□□□ 0.92
TIMP1P01033 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
TIMP1P01033 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
TIMP1P01033 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
TIMP1P01033 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
TIMP1P01033 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC20.81■□□□□ 0.92
TIMP1P01033 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC20.81■□□□□ 0.92
TIMP1P01033 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
TIMP1P01033 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
TIMP1P01033 TSPY22P-201ENST00000427496 604 ntBASIC20.81■□□□□ 0.92
TIMP1P01033 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
TIMP1P01033 AP000867.3-201ENST00000524675 377 ntBASIC20.81■□□□□ 0.92
TIMP1P01033 TPSP2-201ENST00000561760 610 ntBASIC20.81■□□□□ 0.92
TIMP1P01033 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC20.81■□□□□ 0.92
TIMP1P01033 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
TIMP1P01033 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC20.81■□□□□ 0.92
TIMP1P01033 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
TIMP1P01033 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC20.81■□□□□ 0.92
TIMP1P01033 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
TIMP1P01033 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
TIMP1P01033 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
TIMP1P01033 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC20.81■□□□□ 0.92
TIMP1P01033 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
TIMP1P01033 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
TIMP1P01033 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC20.8■□□□□ 0.92
TIMP1P01033 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
TIMP1P01033 GPAT2P1-201ENST00000444924 1672 ntBASIC20.8■□□□□ 0.92
TIMP1P01033 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC20.8■□□□□ 0.92
TIMP1P01033 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
TIMP1P01033 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
TIMP1P01033 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC20.8■□□□□ 0.92
TIMP1P01033 MIR662-201ENST00000384847 95 ntBASIC20.8■□□□□ 0.92
TIMP1P01033 AC106795.1-205ENST00000512851 1056 ntBASIC20.8■□□□□ 0.92
TIMP1P01033 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC20.8■□□□□ 0.92
TIMP1P01033 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC20.8■□□□□ 0.92
TIMP1P01033 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
TIMP1P01033 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
TIMP1P01033 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
TIMP1P01033 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
TIMP1P01033 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
TIMP1P01033 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
TIMP1P01033 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC20.8■□□□□ 0.92
TIMP1P01033 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC20.8■□□□□ 0.92
TIMP1P01033 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
TIMP1P01033 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC20.8■□□□□ 0.92
TIMP1P01033 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC20.79■□□□□ 0.92
TIMP1P01033 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
TIMP1P01033 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
TIMP1P01033 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC20.79■□□□□ 0.92
TIMP1P01033 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
TIMP1P01033 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC20.79■□□□□ 0.92
TIMP1P01033 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC20.79■□□□□ 0.92
TIMP1P01033 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC20.79■□□□□ 0.92
TIMP1P01033 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
TIMP1P01033 GRAMD4P1-201ENST00000435181 1110 ntBASIC20.79■□□□□ 0.92
TIMP1P01033 KRT18P31-201ENST00000506277 1292 ntBASIC20.79■□□□□ 0.92
TIMP1P01033 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC20.79■□□□□ 0.92
TIMP1P01033 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC20.79■□□□□ 0.92
TIMP1P01033 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
TIMP1P01033 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
TIMP1P01033 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC20.79■□□□□ 0.92
TIMP1P01033 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC20.79■□□□□ 0.92
TIMP1P01033 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC20.79■□□□□ 0.92
TIMP1P01033 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC20.78■□□□□ 0.92
TIMP1P01033 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
TIMP1P01033 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
TIMP1P01033 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC20.78■□□□□ 0.92
TIMP1P01033 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
TIMP1P01033 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
TIMP1P01033 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
TIMP1P01033 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
TIMP1P01033 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC20.78■□□□□ 0.92
TIMP1P01033 LINC00265-3P-201ENST00000447588 903 ntBASIC20.78■□□□□ 0.92
TIMP1P01033 FOSL1P1-201ENST00000511041 816 ntBASIC20.78■□□□□ 0.92
TIMP1P01033 CIB2-208ENST00000560618 804 ntTSL 2 BASIC20.78■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 60.3 ms