Protein–RNA interactions for Protein: O95714

HERC2, E3 ubiquitin-protein ligase HERC2, humanhuman

Predictions only

Length 4,834 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERC2O95714 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
HERC2O95714 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC11.95□□□□□ -0.5
HERC2O95714 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
HERC2O95714 EED-207ENST00000528180 1745 ntTSL 5 BASIC11.95□□□□□ -0.5
HERC2O95714 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
HERC2O95714 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
HERC2O95714 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC11.95□□□□□ -0.5
HERC2O95714 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC11.95□□□□□ -0.5
HERC2O95714 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC11.95□□□□□ -0.5
HERC2O95714 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
HERC2O95714 HIST2H3DP1-201ENST00000401004 416 ntBASIC11.95□□□□□ -0.5
HERC2O95714 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC11.95□□□□□ -0.5
HERC2O95714 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC11.95□□□□□ -0.5
HERC2O95714 AC008608.2-201ENST00000606089 416 ntBASIC11.95□□□□□ -0.5
HERC2O95714 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC11.95□□□□□ -0.5
HERC2O95714 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
HERC2O95714 ST6GALNAC6-203ENST00000373142 2448 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
HERC2O95714 BUB3-202ENST00000368859 667 ntTSL 3 BASIC11.94□□□□□ -0.5
HERC2O95714 GALT-202ENST00000450095 1280 ntTSL 2 BASIC11.94□□□□□ -0.5
HERC2O95714 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC11.94□□□□□ -0.5
HERC2O95714 MIR3917-201ENST00000580971 93 ntBASIC11.94□□□□□ -0.5
HERC2O95714 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
HERC2O95714 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
HERC2O95714 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC11.94□□□□□ -0.5
HERC2O95714 PLPPR3-204ENST00000520876 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
HERC2O95714 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
HERC2O95714 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC11.94□□□□□ -0.5
HERC2O95714 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
HERC2O95714 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
HERC2O95714 AC005544.2-201ENST00000579138 229 ntTSL 5 BASIC11.94□□□□□ -0.5
HERC2O95714 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC11.94□□□□□ -0.5
HERC2O95714 AC073592.5-201ENST00000624854 528 ntBASIC11.94□□□□□ -0.5
HERC2O95714 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
HERC2O95714 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC11.94□□□□□ -0.5
HERC2O95714 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC11.94□□□□□ -0.5
HERC2O95714 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
HERC2O95714 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
HERC2O95714 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC11.94□□□□□ -0.5
HERC2O95714 AL136311.1-206ENST00000416069 899 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
HERC2O95714 LINC00351-201ENST00000424926 911 ntTSL 3 BASIC11.94□□□□□ -0.5
HERC2O95714 AP001269.4-201ENST00000609611 512 ntBASIC11.94□□□□□ -0.5
HERC2O95714 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC11.94□□□□□ -0.5
HERC2O95714 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
HERC2O95714 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
HERC2O95714 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
HERC2O95714 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
HERC2O95714 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
HERC2O95714 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC11.94□□□□□ -0.5
HERC2O95714 UNC93B6-202ENST00000528242 690 ntBASIC11.94□□□□□ -0.5
HERC2O95714 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC11.94□□□□□ -0.5
HERC2O95714 AC012640.2-201ENST00000561606 901 ntBASIC11.94□□□□□ -0.5
HERC2O95714 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC11.94□□□□□ -0.5
HERC2O95714 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC11.94□□□□□ -0.5
HERC2O95714 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC11.94□□□□□ -0.5
HERC2O95714 AC025062.2-201ENST00000605477 670 ntBASIC11.94□□□□□ -0.5
HERC2O95714 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC11.94□□□□□ -0.5
HERC2O95714 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC11.94□□□□□ -0.5
HERC2O95714 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
HERC2O95714 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC11.93□□□□□ -0.5
HERC2O95714 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC11.93□□□□□ -0.5
HERC2O95714 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
HERC2O95714 RPS2P28-201ENST00000314255 741 ntBASIC11.93□□□□□ -0.5
HERC2O95714 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC11.93□□□□□ -0.5
HERC2O95714 PAM16-208ENST00000573553 722 ntTSL 2 BASIC11.93□□□□□ -0.5
HERC2O95714 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
HERC2O95714 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
HERC2O95714 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC11.93□□□□□ -0.5
HERC2O95714 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC11.93□□□□□ -0.5
HERC2O95714 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
HERC2O95714 KRT8P41-201ENST00000533985 1514 ntBASIC11.93□□□□□ -0.5
HERC2O95714 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
HERC2O95714 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
HERC2O95714 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
HERC2O95714 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
HERC2O95714 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC11.93□□□□□ -0.5
HERC2O95714 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC11.93□□□□□ -0.5
HERC2O95714 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
HERC2O95714 AL121749.1-202ENST00000609313 2153 ntBASIC11.93□□□□□ -0.5
HERC2O95714 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC11.93□□□□□ -0.5
HERC2O95714 HEBP2-202ENST00000448741 661 ntTSL 5 BASIC11.93□□□□□ -0.5
HERC2O95714 AC069262.1-201ENST00000539058 672 ntBASIC11.93□□□□□ -0.5
HERC2O95714 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
HERC2O95714 HIST1H2AB-201ENST00000615868 393 ntAPPRIS P1 BASIC11.93□□□□□ -0.5
HERC2O95714 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
HERC2O95714 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC11.93□□□□□ -0.5
HERC2O95714 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
HERC2O95714 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC11.93□□□□□ -0.5
HERC2O95714 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
HERC2O95714 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC11.93□□□□□ -0.5
HERC2O95714 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC11.93□□□□□ -0.5
HERC2O95714 SSR4-204ENST00000370087 745 ntAPPRIS P1 TSL 3 BASIC11.93□□□□□ -0.5
HERC2O95714 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
HERC2O95714 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
HERC2O95714 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
HERC2O95714 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
HERC2O95714 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
HERC2O95714 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC11.92□□□□□ -0.5
HERC2O95714 AC018553.1-201ENST00000616682 1458 ntBASIC11.92□□□□□ -0.5
HERC2O95714 UBC-206ENST00000538617 1303 ntTSL 5 BASIC11.92□□□□□ -0.5
HERC2O95714 VAMP4-202ENST00000367740 1193 ntAPPRIS ALT1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Retrieved 100 of 98,524 protein–RNA pairs in 34.1 ms