Protein–RNA interactions for Protein: O43541

SMAD6, Mothers against decapentaplegic homolog 6, humanhuman

Known RBP Predictions only

Length 496 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6O43541 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC19.46■□□□□ 0.71
SMAD6O43541 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
SMAD6O43541 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
SMAD6O43541 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC19.46■□□□□ 0.71
SMAD6O43541 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC19.46■□□□□ 0.71
SMAD6O43541 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC19.46■□□□□ 0.71
SMAD6O43541 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
SMAD6O43541 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SMAD6O43541 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SMAD6O43541 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
SMAD6O43541 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC19.46■□□□□ 0.71
SMAD6O43541 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SMAD6O43541 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SMAD6O43541 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC19.45■□□□□ 0.7
SMAD6O43541 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
SMAD6O43541 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
SMAD6O43541 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
SMAD6O43541 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
SMAD6O43541 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
SMAD6O43541 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
SMAD6O43541 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SMAD6O43541 TSPY14P-201ENST00000303979 915 ntBASIC19.45■□□□□ 0.7
SMAD6O43541 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC19.45■□□□□ 0.7
SMAD6O43541 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC19.45■□□□□ 0.7
SMAD6O43541 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
SMAD6O43541 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC19.45■□□□□ 0.7
SMAD6O43541 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC19.45■□□□□ 0.7
SMAD6O43541 DUT-205ENST00000558813 769 ntTSL 2 BASIC19.45■□□□□ 0.7
SMAD6O43541 C2orf69P3-201ENST00000565542 1120 ntBASIC19.45■□□□□ 0.7
SMAD6O43541 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SMAD6O43541 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
SMAD6O43541 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC19.45■□□□□ 0.7
SMAD6O43541 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SMAD6O43541 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SMAD6O43541 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
SMAD6O43541 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SMAD6O43541 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SMAD6O43541 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SMAD6O43541 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC19.44■□□□□ 0.7
SMAD6O43541 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SMAD6O43541 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC19.44■□□□□ 0.7
SMAD6O43541 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SMAD6O43541 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SMAD6O43541 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC19.44■□□□□ 0.7
SMAD6O43541 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC19.44■□□□□ 0.7
SMAD6O43541 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
SMAD6O43541 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC19.44■□□□□ 0.7
SMAD6O43541 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC19.44■□□□□ 0.7
SMAD6O43541 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC19.44■□□□□ 0.7
SMAD6O43541 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SMAD6O43541 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
SMAD6O43541 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC19.44■□□□□ 0.7
SMAD6O43541 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SMAD6O43541 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
SMAD6O43541 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC19.44■□□□□ 0.7
SMAD6O43541 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC19.43■□□□□ 0.7
SMAD6O43541 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SMAD6O43541 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC19.43■□□□□ 0.7
SMAD6O43541 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SMAD6O43541 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC19.43■□□□□ 0.7
SMAD6O43541 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
SMAD6O43541 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC19.43■□□□□ 0.7
SMAD6O43541 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC19.43■□□□□ 0.7
SMAD6O43541 HIST1H2APS4-201ENST00000362070 348 ntBASIC19.43■□□□□ 0.7
SMAD6O43541 TSPY23P-201ENST00000440136 739 ntBASIC19.43■□□□□ 0.7
SMAD6O43541 ECEL1P2-202ENST00000465689 757 ntBASIC19.43■□□□□ 0.7
SMAD6O43541 TMA16-209ENST00000513272 803 ntTSL 2 BASIC19.43■□□□□ 0.7
SMAD6O43541 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC19.43■□□□□ 0.7
SMAD6O43541 EGLN1P1-201ENST00000531623 762 ntBASIC19.43■□□□□ 0.7
SMAD6O43541 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC19.43■□□□□ 0.7
SMAD6O43541 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
SMAD6O43541 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SMAD6O43541 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SMAD6O43541 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SMAD6O43541 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
SMAD6O43541 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
SMAD6O43541 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SMAD6O43541 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC19.42■□□□□ 0.7
SMAD6O43541 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC19.42■□□□□ 0.7
SMAD6O43541 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC19.42■□□□□ 0.7
SMAD6O43541 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SMAD6O43541 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC19.42■□□□□ 0.7
SMAD6O43541 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SMAD6O43541 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SMAD6O43541 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SMAD6O43541 KRT18P21-201ENST00000515767 1272 ntBASIC19.42■□□□□ 0.7
SMAD6O43541 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC19.42■□□□□ 0.7
SMAD6O43541 PPOX-219ENST00000544598 813 ntTSL 2 BASIC19.42■□□□□ 0.7
SMAD6O43541 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
SMAD6O43541 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
SMAD6O43541 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
SMAD6O43541 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SMAD6O43541 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC19.42■□□□□ 0.7
SMAD6O43541 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SMAD6O43541 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
SMAD6O43541 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC19.42■□□□□ 0.7
SMAD6O43541 KRT18P22-201ENST00000402024 1347 ntBASIC19.42■□□□□ 0.7
SMAD6O43541 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC19.42■□□□□ 0.7
SMAD6O43541 AC007952.6-201ENST00000573168 2673 ntBASIC19.42■□□□□ 0.7
SMAD6O43541 AC003957.1-201ENST00000625108 2673 ntBASIC19.42■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 39.1 ms