Protein–RNA interactions for Protein: A5YKK6

CNOT1, CCR4-NOT transcription complex subunit 1, humanhuman

Known RBP Predictions only

Length 2,376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1A5YKK6 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
CNOT1A5YKK6 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC18.39■□□□□ 0.54
CNOT1A5YKK6 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
CNOT1A5YKK6 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
CNOT1A5YKK6 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC18.39■□□□□ 0.54
CNOT1A5YKK6 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CNOT1A5YKK6 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
CNOT1A5YKK6 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC18.39■□□□□ 0.53
CNOT1A5YKK6 PGAM5P1-201ENST00000518923 814 ntBASIC18.39■□□□□ 0.53
CNOT1A5YKK6 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC18.39■□□□□ 0.53
CNOT1A5YKK6 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CNOT1A5YKK6 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC18.39■□□□□ 0.53
CNOT1A5YKK6 AC074051.2-201ENST00000565115 352 ntBASIC18.39■□□□□ 0.53
CNOT1A5YKK6 KRT8P11-201ENST00000409686 1436 ntBASIC18.39■□□□□ 0.53
CNOT1A5YKK6 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CNOT1A5YKK6 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CNOT1A5YKK6 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CNOT1A5YKK6 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC18.39■□□□□ 0.53
CNOT1A5YKK6 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
CNOT1A5YKK6 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
CNOT1A5YKK6 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
CNOT1A5YKK6 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC18.39■□□□□ 0.53
CNOT1A5YKK6 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CNOT1A5YKK6 SMG8-203ENST00000578922 2178 ntBASIC18.39■□□□□ 0.53
CNOT1A5YKK6 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CNOT1A5YKK6 AC121338.2-201ENST00000622535 1744 ntBASIC18.39■□□□□ 0.53
CNOT1A5YKK6 TLE1-202ENST00000376484 666 ntTSL 3 BASIC18.39■□□□□ 0.53
CNOT1A5YKK6 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC18.39■□□□□ 0.53
CNOT1A5YKK6 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC18.39■□□□□ 0.53
CNOT1A5YKK6 AC104819.1-201ENST00000504587 486 ntBASIC18.39■□□□□ 0.53
CNOT1A5YKK6 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
CNOT1A5YKK6 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC18.39■□□□□ 0.53
CNOT1A5YKK6 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CNOT1A5YKK6 AC243591.1-201ENST00000452967 1364 ntBASIC18.38■□□□□ 0.53
CNOT1A5YKK6 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC18.38■□□□□ 0.53
CNOT1A5YKK6 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC18.38■□□□□ 0.53
CNOT1A5YKK6 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
CNOT1A5YKK6 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC18.38■□□□□ 0.53
CNOT1A5YKK6 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CNOT1A5YKK6 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
CNOT1A5YKK6 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC18.38■□□□□ 0.53
CNOT1A5YKK6 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC18.38■□□□□ 0.53
CNOT1A5YKK6 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC18.38■□□□□ 0.53
CNOT1A5YKK6 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CNOT1A5YKK6 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CNOT1A5YKK6 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC18.38■□□□□ 0.53
CNOT1A5YKK6 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC18.38■□□□□ 0.53
CNOT1A5YKK6 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CNOT1A5YKK6 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CNOT1A5YKK6 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC18.38■□□□□ 0.53
CNOT1A5YKK6 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC18.38■□□□□ 0.53
CNOT1A5YKK6 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC18.38■□□□□ 0.53
CNOT1A5YKK6 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC18.38■□□□□ 0.53
CNOT1A5YKK6 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
CNOT1A5YKK6 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CNOT1A5YKK6 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC18.37■□□□□ 0.53
CNOT1A5YKK6 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CNOT1A5YKK6 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CNOT1A5YKK6 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
CNOT1A5YKK6 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC18.37■□□□□ 0.53
CNOT1A5YKK6 AC005104.2-201ENST00000427818 678 ntBASIC18.37■□□□□ 0.53
CNOT1A5YKK6 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC18.37■□□□□ 0.53
CNOT1A5YKK6 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC18.37■□□□□ 0.53
CNOT1A5YKK6 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CNOT1A5YKK6 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CNOT1A5YKK6 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CNOT1A5YKK6 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CNOT1A5YKK6 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CNOT1A5YKK6 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CNOT1A5YKK6 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC18.37■□□□□ 0.53
CNOT1A5YKK6 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC18.37■□□□□ 0.53
CNOT1A5YKK6 AF238378.1-201ENST00000526806 358 ntBASIC18.37■□□□□ 0.53
CNOT1A5YKK6 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC18.37■□□□□ 0.53
CNOT1A5YKK6 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC18.37■□□□□ 0.53
CNOT1A5YKK6 MIR4674-201ENST00000582457 87 ntBASIC18.37■□□□□ 0.53
CNOT1A5YKK6 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
CNOT1A5YKK6 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC18.36■□□□□ 0.53
CNOT1A5YKK6 AF106564.1-201ENST00000607058 2553 ntBASIC18.36■□□□□ 0.53
CNOT1A5YKK6 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
CNOT1A5YKK6 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CNOT1A5YKK6 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
CNOT1A5YKK6 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
CNOT1A5YKK6 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CNOT1A5YKK6 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC18.36■□□□□ 0.53
CNOT1A5YKK6 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC18.36■□□□□ 0.53
CNOT1A5YKK6 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC18.36■□□□□ 0.53
CNOT1A5YKK6 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC18.36■□□□□ 0.53
CNOT1A5YKK6 AC027796.2-201ENST00000575326 344 ntBASIC18.36■□□□□ 0.53
CNOT1A5YKK6 TP73-AS1-207ENST00000624167 988 ntBASIC18.36■□□□□ 0.53
CNOT1A5YKK6 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
CNOT1A5YKK6 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
CNOT1A5YKK6 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
CNOT1A5YKK6 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
CNOT1A5YKK6 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CNOT1A5YKK6 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
CNOT1A5YKK6 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC18.35■□□□□ 0.53
CNOT1A5YKK6 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
CNOT1A5YKK6 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CNOT1A5YKK6 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
CNOT1A5YKK6 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC18.35■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 27.1 ms