Protein–RNA interactions for Protein: A0A096LP49

CCDC187, Coiled-coil domain-containing protein 187, humanhuman

Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC187A0A096LP49 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
CCDC187A0A096LP49 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC18.23■□□□□ 0.51
CCDC187A0A096LP49 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CCDC187A0A096LP49 AC009237.14-201ENST00000609975 1594 ntBASIC18.23■□□□□ 0.51
CCDC187A0A096LP49 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC18.23■□□□□ 0.51
CCDC187A0A096LP49 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC18.23■□□□□ 0.51
CCDC187A0A096LP49 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC18.23■□□□□ 0.51
CCDC187A0A096LP49 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC18.23■□□□□ 0.51
CCDC187A0A096LP49 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC18.23■□□□□ 0.51
CCDC187A0A096LP49 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC18.23■□□□□ 0.51
CCDC187A0A096LP49 DFFB-212ENST00000625756 649 ntTSL 5 BASIC18.23■□□□□ 0.51
CCDC187A0A096LP49 CLN6-214ENST00000636314 442 ntTSL 3 BASIC18.23■□□□□ 0.51
CCDC187A0A096LP49 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
CCDC187A0A096LP49 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
CCDC187A0A096LP49 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CCDC187A0A096LP49 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
CCDC187A0A096LP49 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC18.23■□□□□ 0.51
CCDC187A0A096LP49 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
CCDC187A0A096LP49 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC18.22■□□□□ 0.51
CCDC187A0A096LP49 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC18.22■□□□□ 0.51
CCDC187A0A096LP49 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC18.22■□□□□ 0.51
CCDC187A0A096LP49 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
CCDC187A0A096LP49 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC18.22■□□□□ 0.51
CCDC187A0A096LP49 AC020907.5-201ENST00000624372 1936 ntBASIC18.22■□□□□ 0.51
CCDC187A0A096LP49 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CCDC187A0A096LP49 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
CCDC187A0A096LP49 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CCDC187A0A096LP49 BUB3-202ENST00000368859 667 ntTSL 3 BASIC18.22■□□□□ 0.51
CCDC187A0A096LP49 FXN-203ENST00000396366 922 ntTSL 2 BASIC18.22■□□□□ 0.51
CCDC187A0A096LP49 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
CCDC187A0A096LP49 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC18.22■□□□□ 0.51
CCDC187A0A096LP49 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC18.22■□□□□ 0.51
CCDC187A0A096LP49 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC18.22■□□□□ 0.51
CCDC187A0A096LP49 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC18.22■□□□□ 0.51
CCDC187A0A096LP49 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC18.22■□□□□ 0.51
CCDC187A0A096LP49 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
CCDC187A0A096LP49 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC18.22■□□□□ 0.51
CCDC187A0A096LP49 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CCDC187A0A096LP49 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
CCDC187A0A096LP49 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
CCDC187A0A096LP49 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
CCDC187A0A096LP49 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
CCDC187A0A096LP49 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CCDC187A0A096LP49 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CCDC187A0A096LP49 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CCDC187A0A096LP49 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
CCDC187A0A096LP49 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
CCDC187A0A096LP49 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CCDC187A0A096LP49 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC18.21■□□□□ 0.51
CCDC187A0A096LP49 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CCDC187A0A096LP49 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
CCDC187A0A096LP49 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
CCDC187A0A096LP49 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC18.21■□□□□ 0.51
CCDC187A0A096LP49 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC18.21■□□□□ 0.51
CCDC187A0A096LP49 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC18.21■□□□□ 0.51
CCDC187A0A096LP49 HYMAI.1-201ENST00000620949 238 ntBASIC18.21■□□□□ 0.51
CCDC187A0A096LP49 AL691432.3-201ENST00000621860 400 ntBASIC18.21■□□□□ 0.51
CCDC187A0A096LP49 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC18.21■□□□□ 0.51
CCDC187A0A096LP49 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
CCDC187A0A096LP49 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CCDC187A0A096LP49 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
CCDC187A0A096LP49 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
CCDC187A0A096LP49 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.5
CCDC187A0A096LP49 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC18.2■□□□□ 0.5
CCDC187A0A096LP49 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC18.2■□□□□ 0.5
CCDC187A0A096LP49 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC18.2■□□□□ 0.5
CCDC187A0A096LP49 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
CCDC187A0A096LP49 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CCDC187A0A096LP49 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CCDC187A0A096LP49 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC18.2■□□□□ 0.5
CCDC187A0A096LP49 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CCDC187A0A096LP49 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CCDC187A0A096LP49 GAD2-202ENST00000376248 680 ntTSL 5 BASIC18.2■□□□□ 0.5
CCDC187A0A096LP49 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC18.2■□□□□ 0.5
CCDC187A0A096LP49 AC026396.1-201ENST00000419388 421 ntBASIC18.2■□□□□ 0.5
CCDC187A0A096LP49 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC18.2■□□□□ 0.5
CCDC187A0A096LP49 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC18.2■□□□□ 0.5
CCDC187A0A096LP49 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC18.2■□□□□ 0.5
CCDC187A0A096LP49 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC18.2■□□□□ 0.5
CCDC187A0A096LP49 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC18.2■□□□□ 0.5
CCDC187A0A096LP49 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC18.2■□□□□ 0.5
CCDC187A0A096LP49 FGF14-AS2-201ENST00000606448 1074 ntBASIC18.2■□□□□ 0.5
CCDC187A0A096LP49 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC18.2■□□□□ 0.5
CCDC187A0A096LP49 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CCDC187A0A096LP49 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
CCDC187A0A096LP49 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
CCDC187A0A096LP49 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CCDC187A0A096LP49 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CCDC187A0A096LP49 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CCDC187A0A096LP49 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC18.2■□□□□ 0.5
CCDC187A0A096LP49 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
CCDC187A0A096LP49 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC18.2■□□□□ 0.5
CCDC187A0A096LP49 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC18.2■□□□□ 0.5
CCDC187A0A096LP49 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
CCDC187A0A096LP49 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC18.19■□□□□ 0.5
CCDC187A0A096LP49 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CCDC187A0A096LP49 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC18.19■□□□□ 0.5
CCDC187A0A096LP49 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CCDC187A0A096LP49 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CCDC187A0A096LP49 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 67.2 ms