Protein–RNA interactions for Protein: Q9Y5H0

PCDHGA3, Protocadherin gamma-A3, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA3Q9Y5H0 TMED11P-201ENST00000479478 690 ntBASIC4.8□□□□□ -1.64
PCDHGA3Q9Y5H0 AC008897.1-201ENST00000494006 347 ntBASIC4.8□□□□□ -1.64
PCDHGA3Q9Y5H0 AC027613.1-201ENST00000508414 457 ntTSL 3 BASIC4.8□□□□□ -1.64
PCDHGA3Q9Y5H0 EPGN-208ENST00000509145 222 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
PCDHGA3Q9Y5H0 LINC02230-201ENST00000511174 301 ntTSL 5 BASIC4.8□□□□□ -1.64
PCDHGA3Q9Y5H0 RAB9BP1-201ENST00000519581 626 ntBASIC4.8□□□□□ -1.64
PCDHGA3Q9Y5H0 AC090809.1-201ENST00000524132 570 ntTSL 4 BASIC4.8□□□□□ -1.64
PCDHGA3Q9Y5H0 AP006289.1-201ENST00000538089 277 ntBASIC4.8□□□□□ -1.64
PCDHGA3Q9Y5H0 LINC02306-201ENST00000546412 529 ntTSL 3 BASIC4.8□□□□□ -1.64
PCDHGA3Q9Y5H0 AL355073.1-201ENST00000560296 517 ntTSL 4 BASIC4.8□□□□□ -1.64
PCDHGA3Q9Y5H0 AC024603.1-201ENST00000597938 592 ntTSL 4 BASIC4.8□□□□□ -1.64
PCDHGA3Q9Y5H0 AL365503.1-201ENST00000605247 905 ntBASIC4.8□□□□□ -1.64
PCDHGA3Q9Y5H0 OR10AB1P-201ENST00000609613 938 ntBASIC4.8□□□□□ -1.64
PCDHGA3Q9Y5H0 AC006329.2-201ENST00000611491 394 ntBASIC4.8□□□□□ -1.64
PCDHGA3Q9Y5H0 AC091834.1-201ENST00000614543 472 ntBASIC4.8□□□□□ -1.64
PCDHGA3Q9Y5H0 AC131238.1-201ENST00000617135 328 ntBASIC4.8□□□□□ -1.64
PCDHGA3Q9Y5H0 Metazoa_SRP.193-201ENST00000622007 277 ntBASIC4.8□□□□□ -1.64
PCDHGA3Q9Y5H0 CPNE8-202ENST00000360449 1757 ntAPPRIS ALT2 TSL 2 BASIC4.8□□□□□ -1.64
PCDHGA3Q9Y5H0 HEATR5A-203ENST00000543095 7840 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
PCDHGA3Q9Y5H0 CDH17-201ENST00000027335 3693 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
PCDHGA3Q9Y5H0 SCAF11-212ENST00000549162 3934 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
PCDHGA3Q9Y5H0 FAM135A-210ENST00000505868 5173 ntTSL 5 BASIC4.79□□□□□ -1.64
PCDHGA3Q9Y5H0 LCMT1-AS2-202ENST00000565214 5666 ntBASIC4.79□□□□□ -1.64
PCDHGA3Q9Y5H0 BCLAF1-202ENST00000392348 2610 ntTSL 5 BASIC4.79□□□□□ -1.64
PCDHGA3Q9Y5H0 CLVS1-205ENST00000519846 3622 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
PCDHGA3Q9Y5H0 SDC2-204ENST00000519914 1318 ntTSL 2 BASIC4.79□□□□□ -1.64
PCDHGA3Q9Y5H0 C4orf17-204ENST00000514652 2542 ntAPPRIS ALT2 TSL 5 BASIC4.79□□□□□ -1.64
PCDHGA3Q9Y5H0 NKRF-202ENST00000371527 3741 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
PCDHGA3Q9Y5H0 ISPD-AS1-202ENST00000438573 2252 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
PCDHGA3Q9Y5H0 TENM1-201ENST00000371130 12875 ntAPPRIS P3 TSL 1 (best) BASIC4.79□□□□□ -1.64
PCDHGA3Q9Y5H0 AL450345.1-202ENST00000605741 3881 ntBASIC4.79□□□□□ -1.64
PCDHGA3Q9Y5H0 RGS13-204ENST00000543215 1518 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
PCDHGA3Q9Y5H0 FAM26F-203ENST00000368606 546 ntTSL 3 BASIC4.79□□□□□ -1.64
PCDHGA3Q9Y5H0 RNU6-297P-201ENST00000384636 107 ntBASIC4.79□□□□□ -1.64
PCDHGA3Q9Y5H0 U3.20-201ENST00000390909 217 ntBASIC4.79□□□□□ -1.64
PCDHGA3Q9Y5H0 RPS20P2-201ENST00000402520 389 ntBASIC4.79□□□□□ -1.64
PCDHGA3Q9Y5H0 MRPL42P2-201ENST00000403169 426 ntBASIC4.79□□□□□ -1.64
PCDHGA3Q9Y5H0 AC114763.2-201ENST00000412593 826 ntTSL 2 BASIC4.79□□□□□ -1.64
PCDHGA3Q9Y5H0 AMMECR1LP1-201ENST00000415152 841 ntBASIC4.79□□□□□ -1.64
PCDHGA3Q9Y5H0 SPA17P1-201ENST00000416656 452 ntBASIC4.79□□□□□ -1.64
PCDHGA3Q9Y5H0 C6orf52-203ENST00000426700 493 ntAPPRIS P2 TSL 2 BASIC4.79□□□□□ -1.64
PCDHGA3Q9Y5H0 AC006548.1-201ENST00000427470 102 ntBASIC4.79□□□□□ -1.64
PCDHGA3Q9Y5H0 AC092017.2-201ENST00000427600 362 ntBASIC4.79□□□□□ -1.64
PCDHGA3Q9Y5H0 AC009238.2-201ENST00000431026 355 ntBASIC4.79□□□□□ -1.64
PCDHGA3Q9Y5H0 AL731563.2-201ENST00000431293 291 ntTSL 5 BASIC4.79□□□□□ -1.64
PCDHGA3Q9Y5H0 RPEP2-201ENST00000432149 701 ntBASIC4.79□□□□□ -1.64
PCDHGA3Q9Y5H0 AL359265.2-201ENST00000434367 631 ntBASIC4.79□□□□□ -1.64
PCDHGA3Q9Y5H0 LINC00280-201ENST00000439525 448 ntTSL 2 BASIC4.79□□□□□ -1.64
PCDHGA3Q9Y5H0 MTND6P13-201ENST00000443510 523 ntBASIC4.79□□□□□ -1.64
PCDHGA3Q9Y5H0 AL031584.1-201ENST00000447169 754 ntBASIC4.79□□□□□ -1.64
PCDHGA3Q9Y5H0 Z99127.1-202ENST00000448686 526 ntTSL 2 BASIC4.79□□□□□ -1.64
PCDHGA3Q9Y5H0 LINC01201-202ENST00000451431 401 ntTSL 3 BASIC4.79□□□□□ -1.64
PCDHGA3Q9Y5H0 CEACAMP6-201ENST00000452007 574 ntBASIC4.79□□□□□ -1.64
PCDHGA3Q9Y5H0 AC107072.2-201ENST00000452412 555 ntTSL 3 BASIC4.79□□□□□ -1.64
PCDHGA3Q9Y5H0 TBL1XR1-AS1-201ENST00000454723 414 ntTSL 5 BASIC4.79□□□□□ -1.64
PCDHGA3Q9Y5H0 AC006967.1-201ENST00000467608 589 ntBASIC4.79□□□□□ -1.64
PCDHGA3Q9Y5H0 AC021382.1-201ENST00000483523 359 ntBASIC4.79□□□□□ -1.64
PCDHGA3Q9Y5H0 TM4SF1-AS1-202ENST00000496491 754 ntTSL 2 BASIC4.79□□□□□ -1.64
PCDHGA3Q9Y5H0 AC008629.1-202ENST00000504820 525 ntTSL 4 BASIC4.79□□□□□ -1.64
PCDHGA3Q9Y5H0 AC010350.1-201ENST00000504908 231 ntBASIC4.79□□□□□ -1.64
PCDHGA3Q9Y5H0 MTND2P33-201ENST00000506452 1031 ntBASIC4.79□□□□□ -1.64
PCDHGA3Q9Y5H0 AC006390.1-201ENST00000508068 283 ntBASIC4.79□□□□□ -1.64
PCDHGA3Q9Y5H0 ZDHHC20P3-201ENST00000531576 336 ntBASIC4.79□□□□□ -1.64
PCDHGA3Q9Y5H0 AC010175.1-201ENST00000538219 224 ntTSL 5 BASIC4.79□□□□□ -1.64
PCDHGA3Q9Y5H0 AC006065.3-201ENST00000541769 419 ntTSL 5 BASIC4.79□□□□□ -1.64
PCDHGA3Q9Y5H0 AL132712.2-201ENST00000556653 127 ntTSL 3 BASIC4.79□□□□□ -1.64
PCDHGA3Q9Y5H0 AC034268.2-201ENST00000571784 482 ntBASIC4.79□□□□□ -1.64
PCDHGA3Q9Y5H0 AL512782.1-201ENST00000603093 364 ntBASIC4.79□□□□□ -1.64
PCDHGA3Q9Y5H0 AC004853.1-201ENST00000604902 698 ntBASIC4.79□□□□□ -1.64
PCDHGA3Q9Y5H0 MIR378J-201ENST00000611988 109 ntBASIC4.79□□□□□ -1.64
PCDHGA3Q9Y5H0 AC091925.2-201ENST00000625059 256 ntBASIC4.79□□□□□ -1.64
PCDHGA3Q9Y5H0 CR381572.1-201ENST00000625098 102 ntBASIC4.79□□□□□ -1.64
PCDHGA3Q9Y5H0 AC010149.2-201ENST00000637608 315 ntBASIC4.79□□□□□ -1.64
PCDHGA3Q9Y5H0 AC099654.12-201ENST00000639868 649 ntBASIC4.79□□□□□ -1.64
PCDHGA3Q9Y5H0 TAX1BP1-202ENST00000396319 2892 ntAPPRIS P3 TSL 1 (best) BASIC4.79□□□□□ -1.64
PCDHGA3Q9Y5H0 MMP16-201ENST00000286614 11558 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
PCDHGA3Q9Y5H0 AC006994.2-202ENST00000639259 3828 ntTSL 5 BASIC4.79□□□□□ -1.64
PCDHGA3Q9Y5H0 PCDH15-203ENST00000373955 4230 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
PCDHGA3Q9Y5H0 AC092125.1-201ENST00000562568 1995 ntBASIC4.78□□□□□ -1.64
PCDHGA3Q9Y5H0 PIK3C3-217ENST00000639914 2722 ntTSL 5 BASIC4.78□□□□□ -1.64
PCDHGA3Q9Y5H0 NMD3P1-201ENST00000439704 1488 ntBASIC4.78□□□□□ -1.64
PCDHGA3Q9Y5H0 OR5T2-201ENST00000313264 1248 ntAPPRIS P2 BASIC4.78□□□□□ -1.64
PCDHGA3Q9Y5H0 RNU1-32P-201ENST00000363937 159 ntBASIC4.78□□□□□ -1.64
PCDHGA3Q9Y5H0 RCAN3-201ENST00000374393 382 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
PCDHGA3Q9Y5H0 TRAV8-1-201ENST00000390430 473 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
PCDHGA3Q9Y5H0 RPL7P25-201ENST00000404151 721 ntBASIC4.78□□□□□ -1.64
PCDHGA3Q9Y5H0 RNA5SP56-201ENST00000410277 118 ntBASIC4.78□□□□□ -1.64
PCDHGA3Q9Y5H0 RN7SKP100-201ENST00000411258 284 ntBASIC4.78□□□□□ -1.64
PCDHGA3Q9Y5H0 FCF1P9-201ENST00000412546 282 ntBASIC4.78□□□□□ -1.64
PCDHGA3Q9Y5H0 RPL36AP10-201ENST00000421785 322 ntBASIC4.78□□□□□ -1.64
PCDHGA3Q9Y5H0 AL353777.1-201ENST00000425552 326 ntBASIC4.78□□□□□ -1.64
PCDHGA3Q9Y5H0 LINC01724-201ENST00000430519 621 ntTSL 3 BASIC4.78□□□□□ -1.64
PCDHGA3Q9Y5H0 MTND3P21-201ENST00000433774 331 ntBASIC4.78□□□□□ -1.64
PCDHGA3Q9Y5H0 MTCYBP45-201ENST00000435243 565 ntBASIC4.78□□□□□ -1.64
PCDHGA3Q9Y5H0 AL591178.1-201ENST00000439239 454 ntTSL 5 BASIC4.78□□□□□ -1.64
PCDHGA3Q9Y5H0 AC112653.1-201ENST00000443851 386 ntBASIC4.78□□□□□ -1.64
PCDHGA3Q9Y5H0 Z73495.1-201ENST00000444982 147 ntTSL 3 BASIC4.78□□□□□ -1.64
PCDHGA3Q9Y5H0 MTND1P1-201ENST00000445453 368 ntBASIC4.78□□□□□ -1.64
PCDHGA3Q9Y5H0 UTAT33-202ENST00000449177 565 ntTSL 2 BASIC4.78□□□□□ -1.64
PCDHGA3Q9Y5H0 HCG17-214ENST00000453558 732 ntTSL 5 BASIC4.78□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 77.7 ms