Protein–RNA interactions for Protein: Q9Y5F3

PCDHB1, Protocadherin beta-1, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB1Q9Y5F3 TRAPPC13-204ENST00000438419 1437 ntAPPRIS P4 TSL 1 (best) BASIC4.74□□□□□ -1.65
PCDHB1Q9Y5F3 TMEM68-202ENST00000434581 2549 ntAPPRIS P1 TSL 5 BASIC4.74□□□□□ -1.65
PCDHB1Q9Y5F3 CSMD3-201ENST00000297405 13212 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
PCDHB1Q9Y5F3 OBSCN-214ENST00000636875 23907 ntTSL 5 BASIC4.74□□□□□ -1.65
PCDHB1Q9Y5F3 SLCO1A2-201ENST00000307378 7682 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
PCDHB1Q9Y5F3 BCLAF1P2-201ENST00000624956 2609 ntBASIC4.74□□□□□ -1.65
PCDHB1Q9Y5F3 RGS13-204ENST00000543215 1518 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
PCDHB1Q9Y5F3 AC011155.1-201ENST00000316512 456 ntBASIC4.74□□□□□ -1.65
PCDHB1Q9Y5F3 AL590240.1-201ENST00000334118 313 ntBASIC4.74□□□□□ -1.65
PCDHB1Q9Y5F3 C9orf92-201ENST00000380683 359 ntAPPRIS P2 TSL 3 BASIC4.74□□□□□ -1.65
PCDHB1Q9Y5F3 U3.30-201ENST00000391308 210 ntBASIC4.74□□□□□ -1.65
PCDHB1Q9Y5F3 ENSAP1-201ENST00000392855 326 ntBASIC4.74□□□□□ -1.65
PCDHB1Q9Y5F3 RN7SKP247-201ENST00000411094 308 ntBASIC4.74□□□□□ -1.65
PCDHB1Q9Y5F3 RPS3AP3-201ENST00000411933 242 ntBASIC4.74□□□□□ -1.65
PCDHB1Q9Y5F3 MTND1P23-201ENST00000416931 372 ntBASIC4.74□□□□□ -1.65
PCDHB1Q9Y5F3 BX510359.2-201ENST00000417920 305 ntBASIC4.74□□□□□ -1.65
PCDHB1Q9Y5F3 AC073521.1-201ENST00000418679 625 ntTSL 3 BASIC4.74□□□□□ -1.65
PCDHB1Q9Y5F3 OR8F1P-201ENST00000425243 930 ntBASIC4.74□□□□□ -1.65
PCDHB1Q9Y5F3 AL445669.1-201ENST00000426743 755 ntBASIC4.74□□□□□ -1.65
PCDHB1Q9Y5F3 AC104651.1-201ENST00000427559 735 ntBASIC4.74□□□□□ -1.65
PCDHB1Q9Y5F3 NRBF2P3-201ENST00000432731 865 ntBASIC4.74□□□□□ -1.65
PCDHB1Q9Y5F3 AL078581.2-201ENST00000446392 378 ntTSL 3 BASIC4.74□□□□□ -1.65
PCDHB1Q9Y5F3 PTMAP3-201ENST00000447474 330 ntBASIC4.74□□□□□ -1.65
PCDHB1Q9Y5F3 MYCBP2-AS1-202ENST00000448470 333 ntTSL 3 BASIC4.74□□□□□ -1.65
PCDHB1Q9Y5F3 AP000542.1-201ENST00000448473 371 ntBASIC4.74□□□□□ -1.65
PCDHB1Q9Y5F3 AC073326.1-201ENST00000451832 557 ntTSL 3 BASIC4.74□□□□□ -1.65
PCDHB1Q9Y5F3 CEACAMP6-201ENST00000452007 574 ntBASIC4.74□□□□□ -1.65
PCDHB1Q9Y5F3 HMGB3P21-201ENST00000452483 547 ntBASIC4.74□□□□□ -1.65
PCDHB1Q9Y5F3 AL589678.1-201ENST00000452685 561 ntTSL 3 BASIC4.74□□□□□ -1.65
PCDHB1Q9Y5F3 HMGB1P15-201ENST00000453854 435 ntBASIC4.74□□□□□ -1.65
PCDHB1Q9Y5F3 BTF3P5-201ENST00000457252 467 ntBASIC4.74□□□□□ -1.65
PCDHB1Q9Y5F3 MTCO1P42-201ENST00000457379 726 ntBASIC4.74□□□□□ -1.65
PCDHB1Q9Y5F3 AC022034.3-201ENST00000471393 478 ntBASIC4.74□□□□□ -1.65
PCDHB1Q9Y5F3 PTPN20-213ENST00000502705 854 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
PCDHB1Q9Y5F3 PDLIM1P4-201ENST00000504327 1006 ntBASIC4.74□□□□□ -1.65
PCDHB1Q9Y5F3 EPGN-208ENST00000509145 222 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
PCDHB1Q9Y5F3 NDUFB4P2-201ENST00000509515 391 ntBASIC4.74□□□□□ -1.65
PCDHB1Q9Y5F3 AC109454.3-201ENST00000512748 669 ntTSL 3 BASIC4.74□□□□□ -1.65
PCDHB1Q9Y5F3 RNU6-1003P-201ENST00000517099 105 ntBASIC4.74□□□□□ -1.65
PCDHB1Q9Y5F3 AC090809.1-201ENST00000524132 570 ntTSL 4 BASIC4.74□□□□□ -1.65
PCDHB1Q9Y5F3 AC016957.1-201ENST00000534895 309 ntBASIC4.74□□□□□ -1.65
PCDHB1Q9Y5F3 MFAP5-205ENST00000535336 566 ntTSL 4 BASIC4.74□□□□□ -1.65
PCDHB1Q9Y5F3 AC009511.1-201ENST00000543527 191 ntTSL 5 BASIC4.74□□□□□ -1.65
PCDHB1Q9Y5F3 MIR5699-201ENST00000578903 90 ntBASIC4.74□□□□□ -1.65
PCDHB1Q9Y5F3 MIR3682-201ENST00000581338 84 ntBASIC4.74□□□□□ -1.65
PCDHB1Q9Y5F3 AC118757.1-201ENST00000586982 453 ntTSL 2 BASIC4.74□□□□□ -1.65
PCDHB1Q9Y5F3 AC135012.2-201ENST00000600234 479 ntTSL 2 BASIC4.74□□□□□ -1.65
PCDHB1Q9Y5F3 AL020997.2-201ENST00000602607 184 ntBASIC4.74□□□□□ -1.65
PCDHB1Q9Y5F3 AL390208.1-201ENST00000605885 644 ntBASIC4.74□□□□□ -1.65
PCDHB1Q9Y5F3 AC091965.4-201ENST00000607691 587 ntBASIC4.74□□□□□ -1.65
PCDHB1Q9Y5F3 AC013476.2-201ENST00000614456 459 ntBASIC4.74□□□□□ -1.65
PCDHB1Q9Y5F3 AC091834.1-201ENST00000614543 472 ntBASIC4.74□□□□□ -1.65
PCDHB1Q9Y5F3 AC243585.1-201ENST00000617867 607 ntTSL 3 BASIC4.74□□□□□ -1.65
PCDHB1Q9Y5F3 AC073534.2-201ENST00000620377 381 ntBASIC4.74□□□□□ -1.65
PCDHB1Q9Y5F3 AL596275.2-204ENST00000641628 552 ntBASIC4.74□□□□□ -1.65
PCDHB1Q9Y5F3 OR52H1-202ENST00000641796 1061 ntBASIC4.74□□□□□ -1.65
PCDHB1Q9Y5F3 AL596275.2-206ENST00000641957 626 ntBASIC4.74□□□□□ -1.65
PCDHB1Q9Y5F3 RASSF6-204ENST00000395777 2735 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
PCDHB1Q9Y5F3 C1orf141-208ENST00000621590 4179 ntAPPRIS ALT2 TSL 5 BASIC4.74□□□□□ -1.65
PCDHB1Q9Y5F3 AC118758.3-201ENST00000624628 24137 ntTSL 5 BASIC4.74□□□□□ -1.65
PCDHB1Q9Y5F3 MARCH1-202ENST00000339875 2476 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
PCDHB1Q9Y5F3 PPIG-207ENST00000448752 2498 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
PCDHB1Q9Y5F3 ZFAND6-212ENST00000559775 1602 ntAPPRIS P1 TSL 2 BASIC4.74□□□□□ -1.65
PCDHB1Q9Y5F3 ZNF568-216ENST00000619231 3797 ntAPPRIS P1 TSL 3 BASIC4.74□□□□□ -1.65
PCDHB1Q9Y5F3 LRRC39-204ENST00000620882 1951 ntTSL 5 BASIC4.74□□□□□ -1.65
PCDHB1Q9Y5F3 MPHOSPH9-211ENST00000541076 6136 ntAPPRIS ALT2 TSL 5 BASIC4.74□□□□□ -1.65
PCDHB1Q9Y5F3 LYST-202ENST00000389794 12985 ntTSL 5 BASIC4.74□□□□□ -1.65
PCDHB1Q9Y5F3 AC006148.1-201ENST00000484322 4310 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
PCDHB1Q9Y5F3 KPNA2P2-201ENST00000419546 1489 ntBASIC4.74□□□□□ -1.65
PCDHB1Q9Y5F3 AC139713.2-214ENST00000642059 1811 ntBASIC4.74□□□□□ -1.65
PCDHB1Q9Y5F3 POU2F1-206ENST00000429375 13651 ntAPPRIS ALT2 TSL 2 BASIC4.74□□□□□ -1.65
PCDHB1Q9Y5F3 ZBTB38-201ENST00000321464 3588 ntAPPRIS P1 BASIC4.74□□□□□ -1.65
PCDHB1Q9Y5F3 ERMN-201ENST00000397283 3760 ntTSL 2 BASIC4.74□□□□□ -1.65
PCDHB1Q9Y5F3 STAG2-204ENST00000371157 5991 ntAPPRIS P3 TSL 1 (best) BASIC4.74□□□□□ -1.65
PCDHB1Q9Y5F3 TLR8-201ENST00000218032 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC4.73□□□□□ -1.65
PCDHB1Q9Y5F3 AC092447.10-201ENST00000620607 1652 ntBASIC4.73□□□□□ -1.65
PCDHB1Q9Y5F3 CDC23-202ENST00000394886 3155 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
PCDHB1Q9Y5F3 AK9-201ENST00000285397 2566 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
PCDHB1Q9Y5F3 MATR3-228ENST00000620916 3134 ntTSL 5 BASIC4.73□□□□□ -1.65
PCDHB1Q9Y5F3 ARHGAP42P3-201ENST00000443989 2508 ntBASIC4.73□□□□□ -1.65
PCDHB1Q9Y5F3 CDC14A-206ENST00000635056 2056 ntTSL 2 BASIC4.73□□□□□ -1.65
PCDHB1Q9Y5F3 AL672167.1-205ENST00000641112 3080 ntBASIC4.73□□□□□ -1.65
PCDHB1Q9Y5F3 CKS1B-201ENST00000308987 759 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
PCDHB1Q9Y5F3 OR2AP1-201ENST00000321688 930 ntAPPRIS P1 BASIC4.73□□□□□ -1.65
PCDHB1Q9Y5F3 OR13G1-201ENST00000359688 1046 ntAPPRIS P1 BASIC4.73□□□□□ -1.65
PCDHB1Q9Y5F3 SNORD82-201ENST00000365530 70 ntBASIC4.73□□□□□ -1.65
PCDHB1Q9Y5F3 RNU6-744P-201ENST00000365557 107 ntBASIC4.73□□□□□ -1.65
PCDHB1Q9Y5F3 RNU6-1316P-201ENST00000384242 108 ntBASIC4.73□□□□□ -1.65
PCDHB1Q9Y5F3 RPL31P1-201ENST00000398116 372 ntBASIC4.73□□□□□ -1.65
PCDHB1Q9Y5F3 SLC9B1P2-201ENST00000398120 1184 ntBASIC4.73□□□□□ -1.65
PCDHB1Q9Y5F3 AL592291.1-201ENST00000403830 352 ntBASIC4.73□□□□□ -1.65
PCDHB1Q9Y5F3 RSU1P3-201ENST00000412878 835 ntBASIC4.73□□□□□ -1.65
PCDHB1Q9Y5F3 AC069280.1-201ENST00000413094 439 ntTSL 3 BASIC4.73□□□□□ -1.65
PCDHB1Q9Y5F3 AC073626.1-201ENST00000415146 582 ntTSL 4 BASIC4.73□□□□□ -1.65
PCDHB1Q9Y5F3 RPL31P45-201ENST00000419532 356 ntBASIC4.73□□□□□ -1.65
PCDHB1Q9Y5F3 AL590233.1-201ENST00000430017 456 ntBASIC4.73□□□□□ -1.65
PCDHB1Q9Y5F3 AC073614.1-201ENST00000438690 650 ntBASIC4.73□□□□□ -1.65
PCDHB1Q9Y5F3 RABEPKP1-201ENST00000440529 1026 ntBASIC4.73□□□□□ -1.65
PCDHB1Q9Y5F3 AC104651.2-201ENST00000447549 528 ntBASIC4.73□□□□□ -1.65
PCDHB1Q9Y5F3 AL365271.1-201ENST00000448909 603 ntTSL 3 BASIC4.73□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 107.5 ms