Protein–RNA interactions for Protein: Q9UBX1

CTSF, Cathepsin F, humanhuman

Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSFQ9UBX1 AL021368.2-201ENST00000606125 5352 ntBASIC3.24□□□□□ -1.89
CTSFQ9UBX1 PGGT1B-203ENST00000419445 9545 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
CTSFQ9UBX1 NUDT12-201ENST00000230792 3492 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
CTSFQ9UBX1 SLC16A7-201ENST00000261187 11777 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
CTSFQ9UBX1 VNN1-201ENST00000367928 3106 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
CTSFQ9UBX1 AL512646.1-201ENST00000269395 1077 ntBASIC3.23□□□□□ -1.89
CTSFQ9UBX1 RNA5SP197-201ENST00000363357 119 ntBASIC3.23□□□□□ -1.89
CTSFQ9UBX1 RNU6-1243P-201ENST00000364028 107 ntBASIC3.23□□□□□ -1.89
CTSFQ9UBX1 RNA5SP235-201ENST00000365411 114 ntBASIC3.23□□□□□ -1.89
CTSFQ9UBX1 SFR1P1-201ENST00000403720 688 ntBASIC3.23□□□□□ -1.89
CTSFQ9UBX1 RNU4-65P-201ENST00000410473 140 ntBASIC3.23□□□□□ -1.89
CTSFQ9UBX1 AC005326.1-201ENST00000429197 123 ntBASIC3.23□□□□□ -1.89
CTSFQ9UBX1 AC097499.1-201ENST00000444277 208 ntBASIC3.23□□□□□ -1.89
CTSFQ9UBX1 AC020719.1-201ENST00000448977 518 ntTSL 3 BASIC3.23□□□□□ -1.89
CTSFQ9UBX1 MRPS31P2-201ENST00000451581 518 ntBASIC3.23□□□□□ -1.89
CTSFQ9UBX1 RPS24P6-201ENST00000452670 400 ntBASIC3.23□□□□□ -1.89
CTSFQ9UBX1 NEGR1-IT1-201ENST00000453121 534 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
CTSFQ9UBX1 LINC01510-203ENST00000458082 626 ntTSL 3 BASIC3.23□□□□□ -1.89
CTSFQ9UBX1 AC012081.1-201ENST00000462382 477 ntTSL 3 BASIC3.23□□□□□ -1.89
CTSFQ9UBX1 RPS27P29-201ENST00000463110 252 ntBASIC3.23□□□□□ -1.89
CTSFQ9UBX1 AC006483.1-201ENST00000487308 313 ntBASIC3.23□□□□□ -1.89
CTSFQ9UBX1 RPL23AP73-201ENST00000492507 471 ntBASIC3.23□□□□□ -1.89
CTSFQ9UBX1 CEP170P1-201ENST00000502249 4587 ntBASIC3.23□□□□□ -1.89
CTSFQ9UBX1 NUDT6-203ENST00000502270 678 ntTSL 5 BASIC3.23□□□□□ -1.89
CTSFQ9UBX1 AC016933.1-201ENST00000504735 539 ntTSL 2 BASIC3.23□□□□□ -1.89
CTSFQ9UBX1 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC3.23□□□□□ -1.89
CTSFQ9UBX1 AC087241.1-201ENST00000508615 429 ntTSL 5 BASIC3.23□□□□□ -1.89
CTSFQ9UBX1 PCBP2P3-201ENST00000509726 843 ntBASIC3.23□□□□□ -1.89
CTSFQ9UBX1 LY96-202ENST00000518893 430 ntTSL 3 BASIC3.23□□□□□ -1.89
CTSFQ9UBX1 AP006245.1-201ENST00000522549 120 ntBASIC3.23□□□□□ -1.89
CTSFQ9UBX1 AC010306.1-201ENST00000523223 1117 ntBASIC3.23□□□□□ -1.89
CTSFQ9UBX1 AC006518.2-202ENST00000544947 297 ntTSL 2 BASIC3.23□□□□□ -1.89
CTSFQ9UBX1 LINC01965-204ENST00000545549 575 ntTSL 4 BASIC3.23□□□□□ -1.89
CTSFQ9UBX1 AL031985.2-201ENST00000600955 480 ntBASIC3.23□□□□□ -1.89
CTSFQ9UBX1 CC2D2B-209ENST00000618242 980 ntTSL 5 BASIC3.23□□□□□ -1.89
CTSFQ9UBX1 hsa-mir-4776-1.1-201ENST00000636364 80 ntBASIC3.23□□□□□ -1.89
CTSFQ9UBX1 U6.107-201ENST00000637108 79 ntBASIC3.23□□□□□ -1.89
CTSFQ9UBX1 USP9Y-201ENST00000338981 10036 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
CTSFQ9UBX1 AL365440.2-201ENST00000419738 2597 ntTSL 2 BASIC3.22□□□□□ -1.89
CTSFQ9UBX1 MBNL1-220ENST00000493459 4205 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
CTSFQ9UBX1 MTND5P27-201ENST00000428871 1720 ntBASIC3.22□□□□□ -1.89
CTSFQ9UBX1 AC068647.1-201ENST00000489539 2265 ntBASIC3.22□□□□□ -1.89
CTSFQ9UBX1 DDX60L-207ENST00000505890 4568 ntTSL 2 BASIC3.22□□□□□ -1.89
CTSFQ9UBX1 CLEC4A-201ENST00000229332 1281 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
CTSFQ9UBX1 OR8K5-201ENST00000313447 924 ntAPPRIS P1 BASIC3.22□□□□□ -1.89
CTSFQ9UBX1 BCL2A1-202ENST00000335661 809 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
CTSFQ9UBX1 RNU6-543P-201ENST00000362576 108 ntBASIC3.22□□□□□ -1.89
CTSFQ9UBX1 RSL24D1P1-201ENST00000404972 493 ntBASIC3.22□□□□□ -1.89
CTSFQ9UBX1 HMGB3P18-201ENST00000406327 590 ntBASIC3.22□□□□□ -1.89
CTSFQ9UBX1 USP9YP19-201ENST00000412165 485 ntBASIC3.22□□□□□ -1.89
CTSFQ9UBX1 AC009505.1-201ENST00000413151 424 ntTSL 2 BASIC3.22□□□□□ -1.89
CTSFQ9UBX1 AL158825.1-201ENST00000414735 521 ntBASIC3.22□□□□□ -1.89
CTSFQ9UBX1 AC093865.1-201ENST00000415387 433 ntTSL 3 BASIC3.22□□□□□ -1.89
CTSFQ9UBX1 EFCAB14-AS1-201ENST00000418985 491 ntTSL 3 BASIC3.22□□□□□ -1.89
CTSFQ9UBX1 KRR1P1-201ENST00000419430 803 ntBASIC3.22□□□□□ -1.89
CTSFQ9UBX1 RPL23AP83-201ENST00000434984 473 ntBASIC3.22□□□□□ -1.89
CTSFQ9UBX1 AC018495.1-201ENST00000440266 452 ntTSL 3 BASIC3.22□□□□□ -1.89
CTSFQ9UBX1 AL591503.2-201ENST00000442314 1005 ntBASIC3.22□□□□□ -1.89
CTSFQ9UBX1 RPS3AP12-201ENST00000443616 753 ntBASIC3.22□□□□□ -1.89
CTSFQ9UBX1 AC104308.1-201ENST00000454621 333 ntBASIC3.22□□□□□ -1.89
CTSFQ9UBX1 snoU13.24-201ENST00000458998 104 ntBASIC3.22□□□□□ -1.89
CTSFQ9UBX1 RPS3AP50-201ENST00000487064 803 ntBASIC3.22□□□□□ -1.89
CTSFQ9UBX1 ENSA-210ENST00000503241 574 ntTSL 3 BASIC3.22□□□□□ -1.89
CTSFQ9UBX1 MDM4-213ENST00000507825 481 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
CTSFQ9UBX1 AC092673.1-201ENST00000510203 428 ntTSL 3 BASIC3.22□□□□□ -1.89
CTSFQ9UBX1 FCF1P8-201ENST00000510322 597 ntBASIC3.22□□□□□ -1.89
CTSFQ9UBX1 AC090833.1-202ENST00000511073 781 ntTSL 3 BASIC3.22□□□□□ -1.89
CTSFQ9UBX1 AC133963.2-201ENST00000513686 578 ntBASIC3.22□□□□□ -1.89
CTSFQ9UBX1 SETP12-201ENST00000514068 805 ntBASIC3.22□□□□□ -1.89
CTSFQ9UBX1 NDUFB9P3-201ENST00000521269 501 ntBASIC3.22□□□□□ -1.89
CTSFQ9UBX1 AC026333.2-201ENST00000542164 106 ntBASIC3.22□□□□□ -1.89
CTSFQ9UBX1 LINC01405-202ENST00000547607 674 ntTSL 3 BASIC3.22□□□□□ -1.89
CTSFQ9UBX1 AC130462.1-201ENST00000548144 549 ntTSL 5 BASIC3.22□□□□□ -1.89
CTSFQ9UBX1 TRAV37-201ENST00000553906 342 ntBASIC3.22□□□□□ -1.89
CTSFQ9UBX1 AL442163.2-201ENST00000553912 710 ntBASIC3.22□□□□□ -1.89
CTSFQ9UBX1 AL160191.1-201ENST00000555480 566 ntTSL 4 BASIC3.22□□□□□ -1.89
CTSFQ9UBX1 AC107954.1-201ENST00000565906 727 ntBASIC3.22□□□□□ -1.89
CTSFQ9UBX1 FOPNL-204ENST00000573396 735 ntTSL 3 BASIC3.22□□□□□ -1.89
CTSFQ9UBX1 CXXC1P1-203ENST00000589302 746 ntTSL 3 BASIC3.22□□□□□ -1.89
CTSFQ9UBX1 PRKCQ-AS1-207ENST00000607996 531 ntTSL 5 BASIC3.22□□□□□ -1.89
CTSFQ9UBX1 STARD13-AS-221ENST00000608197 604 ntTSL 5 BASIC3.22□□□□□ -1.89
CTSFQ9UBX1 AL451074.6-201ENST00000608512 729 ntBASIC3.22□□□□□ -1.89
CTSFQ9UBX1 AL442067.2-201ENST00000614033 363 ntBASIC3.22□□□□□ -1.89
CTSFQ9UBX1 LINC02246-205ENST00000627623 417 ntTSL 5 BASIC3.22□□□□□ -1.89
CTSFQ9UBX1 AP003171.2-202ENST00000634657 355 ntTSL 5 BASIC3.22□□□□□ -1.89
CTSFQ9UBX1 AC127502.3-201ENST00000636170 1206 ntBASIC3.22□□□□□ -1.89
CTSFQ9UBX1 AC073346.2-201ENST00000624724 2058 ntBASIC3.22□□□□□ -1.89
CTSFQ9UBX1 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
CTSFQ9UBX1 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC3.22□□□□□ -1.89
CTSFQ9UBX1 MBNL1-206ENST00000357472 5256 ntTSL 5 BASIC3.22□□□□□ -1.89
CTSFQ9UBX1 MBNL1-223ENST00000498502 5258 ntTSL 5 BASIC3.22□□□□□ -1.89
CTSFQ9UBX1 MFSD8-233ENST00000641482 4860 ntBASIC3.22□□□□□ -1.89
CTSFQ9UBX1 SCOC-203ENST00000394203 1999 ntTSL 2 BASIC3.21□□□□□ -1.89
CTSFQ9UBX1 SYCP2-201ENST00000357552 5567 ntAPPRIS P2 TSL 1 (best) BASIC3.21□□□□□ -1.9
CTSFQ9UBX1 IBTK-209ENST00000510291 4109 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
CTSFQ9UBX1 TET2-204ENST00000413648 4973 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
CTSFQ9UBX1 AC032011.1-201ENST00000611703 1549 ntBASIC3.21□□□□□ -1.9
CTSFQ9UBX1 SLAIN1-203ENST00000351546 2394 ntTSL 2 BASIC3.21□□□□□ -1.9
CTSFQ9UBX1 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC3.21□□□□□ -1.9
CTSFQ9UBX1 VTA1P1-201ENST00000414044 866 ntBASIC3.21□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 98.6 ms