Protein–RNA interactions for Protein: Q9P244

LRFN1, Leucine-rich repeat and fibronectin type III domain-containing protein 1, humanhuman

Predictions only

Length 771 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN1Q9P244 AL592182.3-201ENST00000642132 3304 ntBASIC4.31□□□□□ -1.72
LRFN1Q9P244 CNTN6-205ENST00000446702 4513 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
LRFN1Q9P244 ERGIC2-201ENST00000360150 5014 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
LRFN1Q9P244 TM4SF1-202ENST00000472441 3115 ntTSL 2 BASIC4.31□□□□□ -1.72
LRFN1Q9P244 ZNF137P-201ENST00000456718 1920 ntBASIC4.31□□□□□ -1.72
LRFN1Q9P244 CHD9-221ENST00000615216 10603 ntTSL 5 BASIC4.31□□□□□ -1.72
LRFN1Q9P244 NR3C1-206ENST00000424646 4591 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
LRFN1Q9P244 SDC2-204ENST00000519914 1318 ntTSL 2 BASIC4.31□□□□□ -1.72
LRFN1Q9P244 LINC02456-201ENST00000635615 1323 ntTSL 5 BASIC4.31□□□□□ -1.72
LRFN1Q9P244 CREM-201ENST00000337656 900 ntAPPRIS ALT1 TSL 5 BASIC4.31□□□□□ -1.72
LRFN1Q9P244 RNU4-21P-201ENST00000362802 126 ntBASIC4.31□□□□□ -1.72
LRFN1Q9P244 NFIB-202ENST00000380924 840 ntTSL 5 BASIC4.31□□□□□ -1.72
LRFN1Q9P244 SNORD116-9-201ENST00000384000 95 ntBASIC4.31□□□□□ -1.72
LRFN1Q9P244 SNORD116-3-201ENST00000384287 95 ntBASIC4.31□□□□□ -1.72
LRFN1Q9P244 SNORD116-7-201ENST00000384404 95 ntBASIC4.31□□□□□ -1.72
LRFN1Q9P244 SNORD116-5-201ENST00000384462 95 ntBASIC4.31□□□□□ -1.72
LRFN1Q9P244 SNORA26.8-201ENST00000391306 124 ntBASIC4.31□□□□□ -1.72
LRFN1Q9P244 RPS3AP26-201ENST00000398259 784 ntBASIC4.31□□□□□ -1.72
LRFN1Q9P244 AL356421.1-201ENST00000403255 413 ntBASIC4.31□□□□□ -1.72
LRFN1Q9P244 AL391704.1-203ENST00000414903 462 ntTSL 3 BASIC4.31□□□□□ -1.72
LRFN1Q9P244 RPL17P36-201ENST00000420302 549 ntBASIC4.31□□□□□ -1.72
LRFN1Q9P244 RPS27AP7-201ENST00000422792 455 ntBASIC4.31□□□□□ -1.72
LRFN1Q9P244 LINC00189-202ENST00000431661 308 ntTSL 5 BASIC4.31□□□□□ -1.72
LRFN1Q9P244 ARHGAP26-IT1-201ENST00000433186 388 ntTSL 3 BASIC4.31□□□□□ -1.72
LRFN1Q9P244 AC091862.1-201ENST00000438016 1100 ntBASIC4.31□□□□□ -1.72
LRFN1Q9P244 TRIM60P9Y-201ENST00000438459 816 ntBASIC4.31□□□□□ -1.72
LRFN1Q9P244 ATP6V0E1P2-201ENST00000441771 245 ntBASIC4.31□□□□□ -1.72
LRFN1Q9P244 TRIM60P11Y-201ENST00000445313 801 ntBASIC4.31□□□□□ -1.72
LRFN1Q9P244 AC009961.3-201ENST00000449832 765 ntBASIC4.31□□□□□ -1.72
LRFN1Q9P244 AC073387.1-201ENST00000453261 709 ntBASIC4.31□□□□□ -1.72
LRFN1Q9P244 MTND2P28-201ENST00000457540 1044 ntBASIC4.31□□□□□ -1.72
LRFN1Q9P244 AL024509.2-201ENST00000493462 493 ntBASIC4.31□□□□□ -1.72
LRFN1Q9P244 AC113430.1-201ENST00000506872 718 ntBASIC4.31□□□□□ -1.72
LRFN1Q9P244 AC007016.1-201ENST00000512110 244 ntBASIC4.31□□□□□ -1.72
LRFN1Q9P244 SNHG6-202ENST00000520619 479 ntTSL 3 BASIC4.31□□□□□ -1.72
LRFN1Q9P244 AC021713.1-201ENST00000526554 510 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
LRFN1Q9P244 HIGD1AP10-201ENST00000527837 282 ntBASIC4.31□□□□□ -1.72
LRFN1Q9P244 DEFB130C-201ENST00000528518 237 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
LRFN1Q9P244 MS4A7-208ENST00000530234 730 ntTSL 3 BASIC4.31□□□□□ -1.72
LRFN1Q9P244 AC018630.1-201ENST00000541376 925 ntBASIC4.31□□□□□ -1.72
LRFN1Q9P244 AP003781.1-201ENST00000543403 404 ntTSL 3 BASIC4.31□□□□□ -1.72
LRFN1Q9P244 AC025035.1-201ENST00000551571 894 ntTSL 2 BASIC4.31□□□□□ -1.72
LRFN1Q9P244 LINC02286-201ENST00000552425 285 ntTSL 2 BASIC4.31□□□□□ -1.72
LRFN1Q9P244 AC093012.1-201ENST00000552999 446 ntTSL 3 BASIC4.31□□□□□ -1.72
LRFN1Q9P244 AL355073.1-201ENST00000560296 517 ntTSL 4 BASIC4.31□□□□□ -1.72
LRFN1Q9P244 MIR4277-201ENST00000578298 84 ntBASIC4.31□□□□□ -1.72
LRFN1Q9P244 AC069061.3-201ENST00000582254 823 ntBASIC4.31□□□□□ -1.72
LRFN1Q9P244 MIR4307-201ENST00000582802 84 ntBASIC4.31□□□□□ -1.72
LRFN1Q9P244 MIR4715-201ENST00000584117 79 ntBASIC4.31□□□□□ -1.72
LRFN1Q9P244 AC012669.1-201ENST00000603209 283 ntBASIC4.31□□□□□ -1.72
LRFN1Q9P244 FBXW7-AS1-201ENST00000605147 372 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
LRFN1Q9P244 OR2AS2P-201ENST00000606902 342 ntBASIC4.31□□□□□ -1.72
LRFN1Q9P244 AL353600.1-201ENST00000608148 251 ntBASIC4.31□□□□□ -1.72
LRFN1Q9P244 AC012360.2-201ENST00000609349 391 ntBASIC4.31□□□□□ -1.72
LRFN1Q9P244 AC006338.2-201ENST00000616864 791 ntBASIC4.31□□□□□ -1.72
LRFN1Q9P244 LINC00901.1-201ENST00000617252 152 ntBASIC4.31□□□□□ -1.72
LRFN1Q9P244 AC068137.4-201ENST00000638485 296 ntBASIC4.31□□□□□ -1.72
LRFN1Q9P244 ARHGAP42-203ENST00000524892 5685 ntTSL 5 BASIC4.31□□□□□ -1.72
LRFN1Q9P244 GABRA1-220ENST00000638159 4088 ntTSL 5 BASIC4.31□□□□□ -1.72
LRFN1Q9P244 ZNF705E-201ENST00000525199 3442 ntAPPRIS P1 TSL 2 BASIC4.31□□□□□ -1.72
LRFN1Q9P244 AC108467.2-201ENST00000617640 1597 ntBASIC4.31□□□□□ -1.72
LRFN1Q9P244 ZRANB3-201ENST00000264159 4046 ntAPPRIS P3 TSL 1 (best) BASIC4.3□□□□□ -1.72
LRFN1Q9P244 OR56A3-203ENST00000641160 4438 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
LRFN1Q9P244 ENPP3-202ENST00000358229 3026 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
LRFN1Q9P244 AC092435.4-201ENST00000623012 4159 ntBASIC4.3□□□□□ -1.72
LRFN1Q9P244 RAB23-201ENST00000317483 2546 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
LRFN1Q9P244 R3HDM1-203ENST00000409606 3673 ntAPPRIS ALT1 TSL 2 BASIC4.3□□□□□ -1.72
LRFN1Q9P244 USP29-202ENST00000598197 3284 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
LRFN1Q9P244 UBR1-201ENST00000290650 7761 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
LRFN1Q9P244 STON1-GTF2A1L-201ENST00000394751 3534 ntTSL 2 BASIC4.3□□□□□ -1.72
LRFN1Q9P244 OR2L3-201ENST00000359959 2792 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
LRFN1Q9P244 SYCP1-210ENST00000618516 3109 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
LRFN1Q9P244 DEFB129-201ENST00000246105 698 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
LRFN1Q9P244 TMEM251-201ENST00000283534 909 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
LRFN1Q9P244 AL590762.2-201ENST00000395798 571 ntBASIC4.3□□□□□ -1.72
LRFN1Q9P244 CEBPZOS-205ENST00000406711 687 ntAPPRIS P1 TSL 5 BASIC4.3□□□□□ -1.72
LRFN1Q9P244 MAGI2-AS2-201ENST00000411616 476 ntTSL 2 BASIC4.3□□□□□ -1.72
LRFN1Q9P244 RGS17P1-201ENST00000423358 553 ntBASIC4.3□□□□□ -1.72
LRFN1Q9P244 RPL23AP1-201ENST00000428990 471 ntBASIC4.3□□□□□ -1.72
LRFN1Q9P244 AC109583.1-201ENST00000432156 268 ntBASIC4.3□□□□□ -1.72
LRFN1Q9P244 AC018359.1-201ENST00000442567 574 ntTSL 4 BASIC4.3□□□□□ -1.72
LRFN1Q9P244 BMI1P1-201ENST00000445879 941 ntBASIC4.3□□□□□ -1.72
LRFN1Q9P244 EPS15P1-201ENST00000448836 336 ntBASIC4.3□□□□□ -1.72
LRFN1Q9P244 LINC01474-202ENST00000449235 628 ntTSL 3 BASIC4.3□□□□□ -1.72
LRFN1Q9P244 AL513422.1-201ENST00000449531 383 ntTSL 2 BASIC4.3□□□□□ -1.72
LRFN1Q9P244 LINC01005-202ENST00000451440 531 ntTSL 4 BASIC4.3□□□□□ -1.72
LRFN1Q9P244 RPL31P3-201ENST00000458430 332 ntBASIC4.3□□□□□ -1.72
LRFN1Q9P244 AC104763.1-201ENST00000475274 360 ntBASIC4.3□□□□□ -1.72
LRFN1Q9P244 AC083829.1-201ENST00000503756 657 ntBASIC4.3□□□□□ -1.72
LRFN1Q9P244 PRR16-204ENST00000505123 1298 ntTSL 3 BASIC4.3□□□□□ -1.72
LRFN1Q9P244 RNU6-1095P-201ENST00000516148 108 ntBASIC4.3□□□□□ -1.72
LRFN1Q9P244 AC109466.1-204ENST00000519570 717 ntTSL 3 BASIC4.3□□□□□ -1.72
LRFN1Q9P244 CARD16-203ENST00000525374 503 ntTSL 3 BASIC4.3□□□□□ -1.72
LRFN1Q9P244 LINC01486-201ENST00000538041 716 ntTSL 2 BASIC4.3□□□□□ -1.72
LRFN1Q9P244 SOX9-AS1-214ENST00000540802 578 ntTSL 4 BASIC4.3□□□□□ -1.72
LRFN1Q9P244 AL121603.1-201ENST00000553815 142 ntBASIC4.3□□□□□ -1.72
LRFN1Q9P244 AC015660.2-201ENST00000561362 323 ntTSL 3 BASIC4.3□□□□□ -1.72
LRFN1Q9P244 AC136624.4-201ENST00000573044 370 ntBASIC4.3□□□□□ -1.72
LRFN1Q9P244 AC006270.2-201ENST00000578523 652 ntBASIC4.3□□□□□ -1.72
LRFN1Q9P244 LINC01905-206ENST00000593180 524 ntTSL 2 BASIC4.3□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 82.7 ms