Protein–RNA interactions for Protein: Q9P219

CCDC88C, Protein Daple, humanhuman

Predictions only

Length 2,028 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC88CQ9P219 AC010200.2-201ENST00000605098 235 ntBASIC2.7□□□□□ -1.98
CCDC88CQ9P219 CEP164P1-207ENST00000608660 504 ntTSL 5 BASIC2.7□□□□□ -1.98
CCDC88CQ9P219 AC006111.3-201ENST00000622137 383 ntBASIC2.7□□□□□ -1.98
CCDC88CQ9P219 SNORA50A-202ENST00000629536 136 ntBASIC2.7□□□□□ -1.98
CCDC88CQ9P219 AC008505.1-205ENST00000637847 703 ntTSL 5 BASIC2.7□□□□□ -1.98
CCDC88CQ9P219 ZNF415-207ENST00000595193 2479 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
CCDC88CQ9P219 QSER1-204ENST00000527788 5052 ntTSL 2 BASIC2.7□□□□□ -1.98
CCDC88CQ9P219 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC2.7□□□□□ -1.98
CCDC88CQ9P219 SERPINA7-201ENST00000327674 2642 ntAPPRIS P1 TSL 1 (best) BASIC2.7□□□□□ -1.98
CCDC88CQ9P219 PPIP5K2-203ENST00000414217 5842 ntAPPRIS P3 TSL 1 (best) BASIC2.7□□□□□ -1.98
CCDC88CQ9P219 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC2.7□□□□□ -1.98
CCDC88CQ9P219 AC000367.1-201ENST00000452711 1766 ntBASIC2.7□□□□□ -1.98
CCDC88CQ9P219 UGT2A2-201ENST00000604021 1544 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
CCDC88CQ9P219 SPA17-201ENST00000227135 853 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
CCDC88CQ9P219 MIR449A-201ENST00000362113 91 ntBASIC2.69□□□□□ -1.98
CCDC88CQ9P219 MIR9-1-201ENST00000385198 89 ntBASIC2.69□□□□□ -1.98
CCDC88CQ9P219 AL391832.1-201ENST00000423963 423 ntTSL 5 BASIC2.69□□□□□ -1.98
CCDC88CQ9P219 AC009965.2-201ENST00000425328 970 ntBASIC2.69□□□□□ -1.98
CCDC88CQ9P219 RPS20P32-201ENST00000456044 356 ntBASIC2.69□□□□□ -1.98
CCDC88CQ9P219 AL122008.1-201ENST00000456078 452 ntTSL 3 BASIC2.69□□□□□ -1.98
CCDC88CQ9P219 RPL21P18-201ENST00000469899 480 ntBASIC2.69□□□□□ -1.98
CCDC88CQ9P219 AC012170.1-201ENST00000495139 359 ntBASIC2.69□□□□□ -1.98
CCDC88CQ9P219 GIN1-203ENST00000508629 1040 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
CCDC88CQ9P219 AC025244.2-201ENST00000509215 422 ntTSL 3 BASIC2.69□□□□□ -1.98
CCDC88CQ9P219 RNU4-18P-201ENST00000516751 149 ntBASIC2.69□□□□□ -1.98
CCDC88CQ9P219 LINC00535-204ENST00000520513 305 ntTSL 3 BASIC2.69□□□□□ -1.98
CCDC88CQ9P219 EIF4A2P3-201ENST00000525903 1055 ntBASIC2.69□□□□□ -1.98
CCDC88CQ9P219 MYRFL-202ENST00000535034 881 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
CCDC88CQ9P219 AL161804.1-201ENST00000555600 708 ntTSL 3 BASIC2.69□□□□□ -1.98
CCDC88CQ9P219 ELOCP29-201ENST00000588193 334 ntBASIC2.69□□□□□ -1.98
CCDC88CQ9P219 AC114546.3-201ENST00000623582 1734 ntBASIC2.69□□□□□ -1.98
CCDC88CQ9P219 RN7SKP123-201ENST00000410732 291 ntBASIC2.69□□□□□ -1.98
CCDC88CQ9P219 AC097717.1-233ENST00000413557 460 ntTSL 3 BASIC2.69□□□□□ -1.98
CCDC88CQ9P219 AC078883.3-201ENST00000458314 512 ntTSL 2 BASIC2.69□□□□□ -1.98
CCDC88CQ9P219 RN7SL633P-201ENST00000488974 297 ntBASIC2.69□□□□□ -1.98
CCDC88CQ9P219 OR2AS2P-201ENST00000606902 342 ntBASIC2.69□□□□□ -1.98
CCDC88CQ9P219 AC007998.5-201ENST00000622938 237 ntBASIC2.69□□□□□ -1.98
CCDC88CQ9P219 KIAA0586-215ENST00000619722 5597 ntAPPRIS ALT2 TSL 2 BASIC2.69□□□□□ -1.98
CCDC88CQ9P219 HTR2B-201ENST00000258400 2246 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
CCDC88CQ9P219 AC096644.4-201ENST00000563417 2912 ntBASIC2.68□□□□□ -1.98
CCDC88CQ9P219 SLAIN1-203ENST00000351546 2394 ntTSL 2 BASIC2.68□□□□□ -1.98
CCDC88CQ9P219 AC118273.1-201ENST00000525324 3006 ntBASIC2.68□□□□□ -1.98
CCDC88CQ9P219 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC2.68□□□□□ -1.98
CCDC88CQ9P219 SNORA48.8-201ENST00000391324 134 ntBASIC2.68□□□□□ -1.98
CCDC88CQ9P219 BMS1P22-201ENST00000414726 313 ntBASIC2.68□□□□□ -1.98
CCDC88CQ9P219 LINC00400-201ENST00000425609 547 ntTSL 3 BASIC2.68□□□□□ -1.98
CCDC88CQ9P219 AC097662.1-205ENST00000433324 241 ntTSL 5 BASIC2.68□□□□□ -1.98
CCDC88CQ9P219 AL035706.1-201ENST00000439186 683 ntTSL 3 BASIC2.68□□□□□ -1.98
CCDC88CQ9P219 HMGB3P21-201ENST00000452483 547 ntBASIC2.68□□□□□ -1.98
CCDC88CQ9P219 RNU7-27P-201ENST00000459281 62 ntBASIC2.68□□□□□ -1.98
CCDC88CQ9P219 AC113398.2-201ENST00000507630 558 ntBASIC2.68□□□□□ -1.98
CCDC88CQ9P219 AC027309.2-201ENST00000520566 192 ntBASIC2.68□□□□□ -1.98
CCDC88CQ9P219 AL133330.2-201ENST00000532760 776 ntTSL 2 BASIC2.68□□□□□ -1.98
CCDC88CQ9P219 OR4H12P-201ENST00000556269 907 ntBASIC2.68□□□□□ -1.98
CCDC88CQ9P219 AC027176.1-201ENST00000560204 514 ntBASIC2.68□□□□□ -1.98
CCDC88CQ9P219 FOPNL-205ENST00000573429 646 ntTSL 3 BASIC2.68□□□□□ -1.98
CCDC88CQ9P219 AC091488.1-201ENST00000604239 660 ntBASIC2.68□□□□□ -1.98
CCDC88CQ9P219 AL355816.1-201ENST00000607951 118 ntBASIC2.68□□□□□ -1.98
CCDC88CQ9P219 AL096803.3-201ENST00000609032 532 ntBASIC2.68□□□□□ -1.98
CCDC88CQ9P219 AL139811.1-201ENST00000424779 2299 ntBASIC2.68□□□□□ -1.98
CCDC88CQ9P219 PHTF2-201ENST00000248550 4778 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
CCDC88CQ9P219 DNAH12-201ENST00000311202 1555 ntTSL 2 BASIC2.68□□□□□ -1.98
CCDC88CQ9P219 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
CCDC88CQ9P219 RRAS2-202ENST00000414023 1884 ntTSL 2 BASIC2.68□□□□□ -1.98
CCDC88CQ9P219 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
CCDC88CQ9P219 EMB-205ENST00000514111 1475 ntAPPRIS ALT2 TSL 2 BASIC2.68□□□□□ -1.98
CCDC88CQ9P219 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC2.68□□□□□ -1.98
CCDC88CQ9P219 PKIB-201ENST00000258014 1595 ntTSL 2 BASIC2.68□□□□□ -1.98
CCDC88CQ9P219 CRLS1-202ENST00000378868 994 ntTSL 5 BASIC2.68□□□□□ -1.98
CCDC88CQ9P219 MIR124-3-201ENST00000384866 87 ntBASIC2.68□□□□□ -1.98
CCDC88CQ9P219 AC007403.1-201ENST00000427579 567 ntTSL 4 BASIC2.68□□□□□ -1.98
CCDC88CQ9P219 AC078845.1-202ENST00000435996 733 ntTSL 3 BASIC2.68□□□□□ -1.98
CCDC88CQ9P219 RPL23AP74-201ENST00000437246 471 ntBASIC2.68□□□□□ -1.98
CCDC88CQ9P219 AC007099.2-201ENST00000444852 336 ntTSL 5 BASIC2.68□□□□□ -1.98
CCDC88CQ9P219 RPL31P53-201ENST00000457065 348 ntBASIC2.68□□□□□ -1.98
CCDC88CQ9P219 RN7SL432P-201ENST00000484057 298 ntBASIC2.68□□□□□ -1.98
CCDC88CQ9P219 SRIP1-201ENST00000489235 288 ntBASIC2.68□□□□□ -1.98
CCDC88CQ9P219 H3F3AP1-201ENST00000559984 334 ntBASIC2.68□□□□□ -1.98
CCDC88CQ9P219 MTCO3P13-201ENST00000577757 781 ntBASIC2.68□□□□□ -1.98
CCDC88CQ9P219 AC004832.5-201ENST00000608677 401 ntBASIC2.68□□□□□ -1.98
CCDC88CQ9P219 AC090115.4-201ENST00000609970 188 ntBASIC2.68□□□□□ -1.98
CCDC88CQ9P219 DLD-214ENST00000639772 421 ntTSL 5 BASIC2.68□□□□□ -1.98
CCDC88CQ9P219 PNISR-201ENST00000369239 5112 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
CCDC88CQ9P219 ARHGAP28-202ENST00000314319 5415 ntAPPRIS P2 TSL 5 BASIC2.67□□□□□ -1.98
CCDC88CQ9P219 MYOT-201ENST00000239926 2337 ntAPPRIS P1 TSL 1 (best) BASIC2.67□□□□□ -1.98
CCDC88CQ9P219 KNTC1-201ENST00000333479 6975 ntAPPRIS P1 TSL 1 (best) BASIC2.67□□□□□ -1.98
CCDC88CQ9P219 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
CCDC88CQ9P219 DEFB135-201ENST00000382208 234 ntAPPRIS P1 TSL 1 (best) BASIC2.67□□□□□ -1.98
CCDC88CQ9P219 HSPE1P26-201ENST00000405341 275 ntBASIC2.67□□□□□ -1.98
CCDC88CQ9P219 AC108938.1-201ENST00000451204 136 ntBASIC2.67□□□□□ -1.98
CCDC88CQ9P219 HMGB1P5-202ENST00000451497 985 ntBASIC2.67□□□□□ -1.98
CCDC88CQ9P219 LINC00456-201ENST00000453862 692 ntTSL 3 BASIC2.67□□□□□ -1.98
CCDC88CQ9P219 SNRPG-206ENST00000454893 527 ntTSL 3 BASIC2.67□□□□□ -1.98
CCDC88CQ9P219 SNORD109B-201ENST00000458961 67 ntBASIC2.67□□□□□ -1.98
CCDC88CQ9P219 RNU6-1218P-201ENST00000458990 108 ntBASIC2.67□□□□□ -1.98
CCDC88CQ9P219 SNORD109A-201ENST00000459128 67 ntBASIC2.67□□□□□ -1.98
CCDC88CQ9P219 AC010683.1-201ENST00000473673 378 ntBASIC2.67□□□□□ -1.98
CCDC88CQ9P219 SNORD116-30-201ENST00000516468 85 ntBASIC2.67□□□□□ -1.98
CCDC88CQ9P219 AC087276.1-201ENST00000529659 480 ntBASIC2.67□□□□□ -1.98
CCDC88CQ9P219 C1GALT1P1-201ENST00000548895 1089 ntBASIC2.67□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 98.3 ms