Protein–RNA interactions for Protein: Q9P218

COL20A1, Collagen alpha-1(XX) chain, humanhuman

Predictions only

Length 1,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1Q9P218 ADGRL3-AS1-203ENST00000506704 606 ntTSL 5 BASIC4.73□□□□□ -1.65
COL20A1Q9P218 MTND4P2-201ENST00000507767 1203 ntBASIC4.73□□□□□ -1.65
COL20A1Q9P218 AC109464.3-201ENST00000509456 204 ntTSL 5 BASIC4.73□□□□□ -1.65
COL20A1Q9P218 Y_RNA.655-201ENST00000515919 96 ntBASIC4.73□□□□□ -1.65
COL20A1Q9P218 AC104986.1-201ENST00000517978 436 ntBASIC4.73□□□□□ -1.65
COL20A1Q9P218 AC134698.5-201ENST00000519444 336 ntBASIC4.73□□□□□ -1.65
COL20A1Q9P218 TRIQK-209ENST00000519969 555 ntAPPRIS P1 TSL 4 BASIC4.73□□□□□ -1.65
COL20A1Q9P218 AC022784.7-201ENST00000520017 651 ntTSL 3 BASIC4.73□□□□□ -1.65
COL20A1Q9P218 AL133457.1-201ENST00000564251 987 ntBASIC4.73□□□□□ -1.65
COL20A1Q9P218 AC007952.9-201ENST00000584365 191 ntTSL 3 BASIC4.73□□□□□ -1.65
COL20A1Q9P218 MAGOH2P-202ENST00000584384 429 ntBASIC4.73□□□□□ -1.65
COL20A1Q9P218 SLC25A36P1-201ENST00000590111 465 ntBASIC4.73□□□□□ -1.65
COL20A1Q9P218 PDZPH1P-202ENST00000602846 722 ntTSL 3 BASIC4.73□□□□□ -1.65
COL20A1Q9P218 AP001981.2-201ENST00000603241 418 ntBASIC4.73□□□□□ -1.65
COL20A1Q9P218 RN7SKP299-201ENST00000606679 301 ntBASIC4.73□□□□□ -1.65
COL20A1Q9P218 PRKCQ-AS1-207ENST00000607996 531 ntTSL 5 BASIC4.73□□□□□ -1.65
COL20A1Q9P218 SNORD91B-202ENST00000608459 222 ntBASIC4.73□□□□□ -1.65
COL20A1Q9P218 AC092192.1-201ENST00000633154 1018 ntBASIC4.73□□□□□ -1.65
COL20A1Q9P218 VIM-AS1-201ENST00000437232 1351 ntTSL 2 BASIC4.73□□□□□ -1.65
COL20A1Q9P218 PLCE1-202ENST00000371380 12024 ntAPPRIS P3 TSL 1 (best) BASIC4.73□□□□□ -1.65
COL20A1Q9P218 ARHGEF12-202ENST00000397843 9660 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
COL20A1Q9P218 MAPK10-235ENST00000638225 8941 ntAPPRIS P2 TSL 1 (best) BASIC4.73□□□□□ -1.65
COL20A1Q9P218 LINC01902-202ENST00000636983 4607 ntTSL 5 BASIC4.73□□□□□ -1.65
COL20A1Q9P218 AC006971.1-201ENST00000407916 4486 ntBASIC4.72□□□□□ -1.65
COL20A1Q9P218 MTCO1P23-201ENST00000415223 1526 ntBASIC4.72□□□□□ -1.65
COL20A1Q9P218 PARP11-201ENST00000228820 4424 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
COL20A1Q9P218 PARP11-203ENST00000427057 4406 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
COL20A1Q9P218 CNTN6-205ENST00000446702 4513 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
COL20A1Q9P218 FMO2-201ENST00000209929 3851 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
COL20A1Q9P218 RIMS2-201ENST00000262231 3854 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
COL20A1Q9P218 AC097504.1-201ENST00000515103 2415 ntBASIC4.72□□□□□ -1.65
COL20A1Q9P218 STEAP2-203ENST00000394622 6612 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
COL20A1Q9P218 CCSER2-210ENST00000543283 5888 ntTSL 2 BASIC4.72□□□□□ -1.65
COL20A1Q9P218 CSTA-201ENST00000264474 751 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
COL20A1Q9P218 OR2B2-201ENST00000303324 1212 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
COL20A1Q9P218 RNU6-501P-201ENST00000364072 100 ntBASIC4.72□□□□□ -1.65
COL20A1Q9P218 RN7SKP224-201ENST00000364140 325 ntBASIC4.72□□□□□ -1.65
COL20A1Q9P218 AC016769.3-201ENST00000396562 315 ntBASIC4.72□□□□□ -1.65
COL20A1Q9P218 AC108032.1-201ENST00000416706 207 ntBASIC4.72□□□□□ -1.65
COL20A1Q9P218 RPL36AP36-201ENST00000418616 301 ntBASIC4.72□□□□□ -1.65
COL20A1Q9P218 AL138785.1-201ENST00000425821 331 ntBASIC4.72□□□□□ -1.65
COL20A1Q9P218 OR4F13P-201ENST00000428478 931 ntBASIC4.72□□□□□ -1.65
COL20A1Q9P218 AL512649.1-201ENST00000428997 581 ntBASIC4.72□□□□□ -1.65
COL20A1Q9P218 ARHGEF7-AS1-201ENST00000435037 321 ntTSL 3 BASIC4.72□□□□□ -1.65
COL20A1Q9P218 AL512286.1-201ENST00000439244 400 ntBASIC4.72□□□□□ -1.65
COL20A1Q9P218 LINC01923-201ENST00000443261 592 ntTSL 5 BASIC4.72□□□□□ -1.65
COL20A1Q9P218 TAF9P1-201ENST00000445421 515 ntBASIC4.72□□□□□ -1.65
COL20A1Q9P218 EEF1E1P1-201ENST00000446998 430 ntBASIC4.72□□□□□ -1.65
COL20A1Q9P218 TAF9P2-201ENST00000454958 515 ntBASIC4.72□□□□□ -1.65
COL20A1Q9P218 AC079804.1-201ENST00000461922 436 ntBASIC4.72□□□□□ -1.65
COL20A1Q9P218 LEKR1-206ENST00000483177 546 ntTSL 3 BASIC4.72□□□□□ -1.65
COL20A1Q9P218 AC068724.1-201ENST00000487100 792 ntBASIC4.72□□□□□ -1.65
COL20A1Q9P218 AL139147.1-201ENST00000502413 1156 ntTSL 2 BASIC4.72□□□□□ -1.65
COL20A1Q9P218 TMEM251P1-201ENST00000503717 318 ntBASIC4.72□□□□□ -1.65
COL20A1Q9P218 SCOC-206ENST00000506322 687 ntAPPRIS ALT1 TSL 5 BASIC4.72□□□□□ -1.65
COL20A1Q9P218 LINC02229-201ENST00000508486 661 ntTSL 3 BASIC4.72□□□□□ -1.65
COL20A1Q9P218 AC098868.1-201ENST00000512628 624 ntTSL 2 BASIC4.72□□□□□ -1.65
COL20A1Q9P218 AC090739.1-201ENST00000522190 708 ntTSL 3 BASIC4.72□□□□□ -1.65
COL20A1Q9P218 PHBP17-201ENST00000528576 541 ntBASIC4.72□□□□□ -1.65
COL20A1Q9P218 AL353699.1-201ENST00000529078 365 ntTSL 3 BASIC4.72□□□□□ -1.65
COL20A1Q9P218 AC068587.4-201ENST00000533893 186 ntBASIC4.72□□□□□ -1.65
COL20A1Q9P218 LINC02235-201ENST00000534675 466 ntTSL 5 BASIC4.72□□□□□ -1.65
COL20A1Q9P218 AC092470.1-201ENST00000546187 132 ntBASIC4.72□□□□□ -1.65
COL20A1Q9P218 AC093012.1-201ENST00000552999 446 ntTSL 3 BASIC4.72□□□□□ -1.65
COL20A1Q9P218 LINC02461-201ENST00000553211 836 ntTSL 3 BASIC4.72□□□□□ -1.65
COL20A1Q9P218 AL133279.1-201ENST00000553487 473 ntTSL 3 BASIC4.72□□□□□ -1.65
COL20A1Q9P218 RPL21P7-201ENST00000557463 483 ntBASIC4.72□□□□□ -1.65
COL20A1Q9P218 MIR1254-2-201ENST00000579553 63 ntBASIC4.72□□□□□ -1.65
COL20A1Q9P218 AC008759.1-201ENST00000589783 983 ntBASIC4.72□□□□□ -1.65
COL20A1Q9P218 AC024563.1-202ENST00000597533 419 ntTSL 3 BASIC4.72□□□□□ -1.65
COL20A1Q9P218 U73023.1-201ENST00000603134 700 ntBASIC4.72□□□□□ -1.65
COL20A1Q9P218 AL513477.2-201ENST00000607858 568 ntBASIC4.72□□□□□ -1.65
COL20A1Q9P218 LINC01358-205ENST00000625548 874 ntTSL 5 BASIC4.72□□□□□ -1.65
COL20A1Q9P218 WASF3-AS1-206ENST00000626779 381 ntTSL 5 BASIC4.72□□□□□ -1.65
COL20A1Q9P218 CYP3A51P-201ENST00000633513 256 ntBASIC4.72□□□□□ -1.65
COL20A1Q9P218 XIRP2-203ENST00000409195 12675 ntTSL 5 BASIC4.72□□□□□ -1.65
COL20A1Q9P218 ROBO2-213ENST00000614793 7662 ntTSL 5 BASIC4.72□□□□□ -1.65
COL20A1Q9P218 DTNA-202ENST00000283365 6522 ntTSL 5 BASIC4.72□□□□□ -1.65
COL20A1Q9P218 MGAT4C-202ENST00000548651 2159 ntAPPRIS P1 TSL 5 BASIC4.72□□□□□ -1.65
COL20A1Q9P218 ORMDL1-201ENST00000325795 2692 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
COL20A1Q9P218 HACD4-202ENST00000495827 8267 ntAPPRIS P1 TSL 2 BASIC4.72□□□□□ -1.65
COL20A1Q9P218 SLC17A1-204ENST00000476801 1704 ntAPPRIS P1 TSL 2 BASIC4.72□□□□□ -1.65
COL20A1Q9P218 ZFAND6-212ENST00000559775 1602 ntAPPRIS P1 TSL 2 BASIC4.72□□□□□ -1.65
COL20A1Q9P218 AL356473.1-201ENST00000406203 1408 ntBASIC4.72□□□□□ -1.65
COL20A1Q9P218 PPP2R5C-226ENST00000557095 1307 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
COL20A1Q9P218 AC105074.1-201ENST00000623380 3095 ntBASIC4.71□□□□□ -1.65
COL20A1Q9P218 EPHA7-202ENST00000369303 6588 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.65
COL20A1Q9P218 LMNTD1-204ENST00000458174 1677 ntAPPRIS ALT2 TSL 2 BASIC4.71□□□□□ -1.66
COL20A1Q9P218 AL031985.3-201ENST00000565390 2449 ntBASIC4.71□□□□□ -1.66
COL20A1Q9P218 SPAM1-205ENST00000439500 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC4.71□□□□□ -1.66
COL20A1Q9P218 GPAM-201ENST00000348367 6371 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
COL20A1Q9P218 RNU6-433P-201ENST00000363216 104 ntBASIC4.71□□□□□ -1.66
COL20A1Q9P218 GTSF1L-201ENST00000373003 835 ntAPPRIS P3 BASIC4.71□□□□□ -1.66
COL20A1Q9P218 GTSF1L-202ENST00000373005 459 ntAPPRIS ALT2 TSL 3 BASIC4.71□□□□□ -1.66
COL20A1Q9P218 ESD-201ENST00000378697 1079 ntTSL 5 BASIC4.71□□□□□ -1.66
COL20A1Q9P218 EQTN-202ENST00000380032 1033 ntAPPRIS P3 TSL 1 (best) BASIC4.71□□□□□ -1.66
COL20A1Q9P218 MFAP5-202ENST00000396549 1195 ntTSL 2 BASIC4.71□□□□□ -1.66
COL20A1Q9P218 VN1R8P-201ENST00000407739 893 ntBASIC4.71□□□□□ -1.66
COL20A1Q9P218 MIR1179-201ENST00000408703 91 ntBASIC4.71□□□□□ -1.66
COL20A1Q9P218 GTDC1-206ENST00000409214 2954 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 115.5 ms