Protein–RNA interactions for Protein: Q9NPC8

SIX2, Homeobox protein SIX2, humanhuman

Predictions only

Length 291 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX2Q9NPC8 LINC02375-201ENST00000545739 852 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
SIX2Q9NPC8 GTF2IP22-201ENST00000554443 182 ntBASIC3.84□□□□□ -1.79
SIX2Q9NPC8 AC025682.1-201ENST00000582389 437 ntTSL 5 BASIC3.84□□□□□ -1.79
SIX2Q9NPC8 AC008946.1-201ENST00000599756 421 ntTSL 3 BASIC3.84□□□□□ -1.79
SIX2Q9NPC8 AC091488.1-201ENST00000604239 660 ntBASIC3.84□□□□□ -1.79
SIX2Q9NPC8 AL451086.1-201ENST00000605596 223 ntBASIC3.84□□□□□ -1.79
SIX2Q9NPC8 KLRF1-207ENST00000617793 1096 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
SIX2Q9NPC8 AP000676.3-201ENST00000623299 569 ntBASIC3.84□□□□□ -1.79
SIX2Q9NPC8 AC109315.1-201ENST00000584143 1347 ntBASIC3.84□□□□□ -1.79
SIX2Q9NPC8 GABRA1-220ENST00000638159 4088 ntTSL 5 BASIC3.84□□□□□ -1.79
SIX2Q9NPC8 AL049737.1-201ENST00000413920 1403 ntBASIC3.84□□□□□ -1.79
SIX2Q9NPC8 NUDT12-201ENST00000230792 3492 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.8
SIX2Q9NPC8 GPRC6A-202ENST00000368549 2622 ntTSL 1 (best) BASIC3.84□□□□□ -1.8
SIX2Q9NPC8 BMPR1B-203ENST00000440890 5388 ntTSL 2 BASIC3.84□□□□□ -1.8
SIX2Q9NPC8 MUC19-205ENST00000454784 24775 ntTSL 5 BASIC3.83□□□□□ -1.8
SIX2Q9NPC8 PLG-203ENST00000366924 1166 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
SIX2Q9NPC8 LINC02337-201ENST00000401043 374 ntTSL 3 BASIC3.83□□□□□ -1.8
SIX2Q9NPC8 ATP5A1P2-201ENST00000412323 255 ntBASIC3.83□□□□□ -1.8
SIX2Q9NPC8 AC009518.2-201ENST00000418056 731 ntBASIC3.83□□□□□ -1.8
SIX2Q9NPC8 GPC5-AS1-201ENST00000419288 393 ntTSL 3 BASIC3.83□□□□□ -1.8
SIX2Q9NPC8 AC099336.2-201ENST00000422457 254 ntBASIC3.83□□□□□ -1.8
SIX2Q9NPC8 AL139421.1-201ENST00000423010 169 ntBASIC3.83□□□□□ -1.8
SIX2Q9NPC8 AC005165.1-203ENST00000423689 1281 ntTSL 3 BASIC3.83□□□□□ -1.8
SIX2Q9NPC8 RPL7P2-201ENST00000427639 268 ntBASIC3.83□□□□□ -1.8
SIX2Q9NPC8 ZMYM4-AS1-201ENST00000432683 459 ntTSL 2 BASIC3.83□□□□□ -1.8
SIX2Q9NPC8 ATP5F1P1-201ENST00000433775 569 ntBASIC3.83□□□□□ -1.8
SIX2Q9NPC8 AC092393.1-201ENST00000439625 742 ntBASIC3.83□□□□□ -1.8
SIX2Q9NPC8 ATP2B2-IT1-201ENST00000440152 472 ntTSL 3 BASIC3.83□□□□□ -1.8
SIX2Q9NPC8 MTND3P1-201ENST00000441336 220 ntBASIC3.83□□□□□ -1.8
SIX2Q9NPC8 RAB11AP1-201ENST00000442978 646 ntBASIC3.83□□□□□ -1.8
SIX2Q9NPC8 Z99714.1-201ENST00000450463 807 ntBASIC3.83□□□□□ -1.8
SIX2Q9NPC8 LINC02077-201ENST00000465795 409 ntTSL 3 BASIC3.83□□□□□ -1.8
SIX2Q9NPC8 BET1P1-201ENST00000482276 359 ntBASIC3.83□□□□□ -1.8
SIX2Q9NPC8 SETP14-201ENST00000497538 873 ntBASIC3.83□□□□□ -1.8
SIX2Q9NPC8 AC093752.1-212ENST00000500559 453 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
SIX2Q9NPC8 FTH1P24-201ENST00000503502 462 ntBASIC3.83□□□□□ -1.8
SIX2Q9NPC8 MND1-203ENST00000504860 638 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
SIX2Q9NPC8 AC108935.1-201ENST00000504874 518 ntTSL 2 BASIC3.83□□□□□ -1.8
SIX2Q9NPC8 WBP1LP4-201ENST00000505043 344 ntBASIC3.83□□□□□ -1.8
SIX2Q9NPC8 AC079395.1-201ENST00000510981 262 ntBASIC3.83□□□□□ -1.8
SIX2Q9NPC8 IL7R-208ENST00000511982 612 ntTSL 2 BASIC3.83□□□□□ -1.8
SIX2Q9NPC8 RNU6-1225P-201ENST00000516336 65 ntBASIC3.83□□□□□ -1.8
SIX2Q9NPC8 RNU6-885P-201ENST00000516607 104 ntBASIC3.83□□□□□ -1.8
SIX2Q9NPC8 CA1-215ENST00000522389 551 ntTSL 3 BASIC3.83□□□□□ -1.8
SIX2Q9NPC8 RGS5-206ENST00000527988 373 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
SIX2Q9NPC8 AL354920.1-202ENST00000531661 1017 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
SIX2Q9NPC8 AC016597.1-201ENST00000564893 528 ntTSL 4 BASIC3.83□□□□□ -1.8
SIX2Q9NPC8 AC109446.2-201ENST00000567872 497 ntBASIC3.83□□□□□ -1.8
SIX2Q9NPC8 AC002400.1-201ENST00000569310 726 ntBASIC3.83□□□□□ -1.8
SIX2Q9NPC8 AC106796.1-201ENST00000577173 615 ntTSL 3 BASIC3.83□□□□□ -1.8
SIX2Q9NPC8 AC138207.6-203ENST00000581652 565 ntTSL 4 BASIC3.83□□□□□ -1.8
SIX2Q9NPC8 AC004223.2-201ENST00000590309 544 ntBASIC3.83□□□□□ -1.8
SIX2Q9NPC8 ZNF283-207ENST00000593164 1260 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
SIX2Q9NPC8 AL109653.1-201ENST00000603091 248 ntBASIC3.83□□□□□ -1.8
SIX2Q9NPC8 AL158042.1-201ENST00000605338 460 ntBASIC3.83□□□□□ -1.8
SIX2Q9NPC8 AC024941.1-201ENST00000612250 334 ntBASIC3.83□□□□□ -1.8
SIX2Q9NPC8 AC121761.2-201ENST00000617300 689 ntBASIC3.83□□□□□ -1.8
SIX2Q9NPC8 AC112200.1-201ENST00000625015 234 ntBASIC3.83□□□□□ -1.8
SIX2Q9NPC8 hsa-mir-4776-1.1-201ENST00000636364 80 ntBASIC3.83□□□□□ -1.8
SIX2Q9NPC8 AP003399.1-201ENST00000637534 361 ntBASIC3.83□□□□□ -1.8
SIX2Q9NPC8 AC103706.2-201ENST00000638080 240 ntBASIC3.83□□□□□ -1.8
SIX2Q9NPC8 AC134980.1-211ENST00000638243 1094 ntTSL 2 BASIC3.83□□□□□ -1.8
SIX2Q9NPC8 MAPK6PS3-201ENST00000403865 2162 ntBASIC3.83□□□□□ -1.8
SIX2Q9NPC8 ING3-201ENST00000315870 3777 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
SIX2Q9NPC8 PPP1R9A-208ENST00000456331 10090 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
SIX2Q9NPC8 AC058791.1-201ENST00000608412 3198 ntBASIC3.82□□□□□ -1.8
SIX2Q9NPC8 ATP13A3-203ENST00000439040 7720 ntAPPRIS P1 TSL 5 BASIC3.82□□□□□ -1.8
SIX2Q9NPC8 KIAA1841-202ENST00000356719 2149 ntTSL 5 BASIC3.82□□□□□ -1.8
SIX2Q9NPC8 RABGAP1L-202ENST00000325589 1880 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
SIX2Q9NPC8 RGPD4-201ENST00000408999 5464 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
SIX2Q9NPC8 AC007685.1-201ENST00000329806 452 ntBASIC3.82□□□□□ -1.8
SIX2Q9NPC8 RN7SKP227-201ENST00000364445 330 ntBASIC3.82□□□□□ -1.8
SIX2Q9NPC8 Y_RNA.408-201ENST00000383987 102 ntBASIC3.82□□□□□ -1.8
SIX2Q9NPC8 AL139098.1-201ENST00000407291 389 ntBASIC3.82□□□□□ -1.8
SIX2Q9NPC8 RNU6-757P-201ENST00000410334 100 ntBASIC3.82□□□□□ -1.8
SIX2Q9NPC8 RNU4-72P-201ENST00000410754 173 ntBASIC3.82□□□□□ -1.8
SIX2Q9NPC8 AC118345.1-201ENST00000411785 366 ntTSL 3 BASIC3.82□□□□□ -1.8
SIX2Q9NPC8 AC239803.1-203ENST00000411978 452 ntTSL 2 BASIC3.82□□□□□ -1.8
SIX2Q9NPC8 AL672277.1-201ENST00000420865 588 ntTSL 2 BASIC3.82□□□□□ -1.8
SIX2Q9NPC8 AL157378.1-201ENST00000424506 265 ntTSL 5 BASIC3.82□□□□□ -1.8
SIX2Q9NPC8 LINC00382-201ENST00000427918 890 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
SIX2Q9NPC8 AL445584.1-201ENST00000431451 330 ntBASIC3.82□□□□□ -1.8
SIX2Q9NPC8 AC006369.2-201ENST00000431712 384 ntTSL 3 BASIC3.82□□□□□ -1.8
SIX2Q9NPC8 UBE2D3P1-201ENST00000436669 444 ntBASIC3.82□□□□□ -1.8
SIX2Q9NPC8 AC092013.1-201ENST00000438795 332 ntBASIC3.82□□□□□ -1.8
SIX2Q9NPC8 AC004865.1-201ENST00000442276 1003 ntBASIC3.82□□□□□ -1.8
SIX2Q9NPC8 LINC00363-201ENST00000443228 210 ntTSL 5 BASIC3.82□□□□□ -1.8
SIX2Q9NPC8 AL133260.2-201ENST00000445833 396 ntTSL 3 BASIC3.82□□□□□ -1.8
SIX2Q9NPC8 AC004160.1-211ENST00000445839 565 ntTSL 4 BASIC3.82□□□□□ -1.8
SIX2Q9NPC8 SATB1-AS1-204ENST00000453361 726 ntTSL 3 BASIC3.82□□□□□ -1.8
SIX2Q9NPC8 AC010789.1-201ENST00000458489 291 ntTSL 5 BASIC3.82□□□□□ -1.8
SIX2Q9NPC8 RPL21P71-201ENST00000465598 459 ntBASIC3.82□□□□□ -1.8
SIX2Q9NPC8 RN7SL594P-201ENST00000470590 287 ntBASIC3.82□□□□□ -1.8
SIX2Q9NPC8 GUCA1C-203ENST00000471108 633 ntTSL 2 BASIC3.82□□□□□ -1.8
SIX2Q9NPC8 MDM2-217ENST00000478070 692 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
SIX2Q9NPC8 AC011352.3-201ENST00000505162 593 ntBASIC3.82□□□□□ -1.8
SIX2Q9NPC8 AC021146.8-201ENST00000507455 733 ntBASIC3.82□□□□□ -1.8
SIX2Q9NPC8 AC097480.1-201ENST00000509416 712 ntTSL 3 BASIC3.82□□□□□ -1.8
SIX2Q9NPC8 AC117522.2-201ENST00000510049 657 ntBASIC3.82□□□□□ -1.8
SIX2Q9NPC8 PRB1-204ENST00000546254 1170 ntAPPRIS ALT2 TSL 5 BASIC3.82□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 88.8 ms