Protein–RNA interactions for Protein: Q9HCM3

KIAA1549, UPF0606 protein KIAA1549, humanhuman

Predictions only

Length 1,950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KIAA1549Q9HCM3 Z84488.1-201ENST00000476099 530 ntTSL 2 BASIC2.54□□□□□ -2
KIAA1549Q9HCM3 KC877373.1-201ENST00000479066 408 ntBASIC2.54□□□□□ -2
KIAA1549Q9HCM3 AC025244.2-201ENST00000509215 422 ntTSL 3 BASIC2.54□□□□□ -2
KIAA1549Q9HCM3 A2ML1-AS1-201ENST00000537288 452 ntTSL 3 BASIC2.54□□□□□ -2
KIAA1549Q9HCM3 AC010653.1-201ENST00000571108 881 ntBASIC2.54□□□□□ -2
KIAA1549Q9HCM3 AC068408.2-201ENST00000584566 439 ntTSL 3 BASIC2.54□□□□□ -2
KIAA1549Q9HCM3 AL157938.2-203ENST00000589540 931 ntTSL 5 BASIC2.54□□□□□ -2
KIAA1549Q9HCM3 AL133370.2-201ENST00000619934 439 ntBASIC2.54□□□□□ -2
KIAA1549Q9HCM3 CGA-204ENST00000627148 1010 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
KIAA1549Q9HCM3 RTKN2-201ENST00000315289 2383 ntTSL 2 BASIC2.54□□□□□ -2
KIAA1549Q9HCM3 LINC01419-201ENST00000522365 1521 ntTSL 1 (best) BASIC2.54□□□□□ -2
KIAA1549Q9HCM3 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
KIAA1549Q9HCM3 ATL2-202ENST00000402054 1883 ntTSL 5 BASIC2.53□□□□□ -2
KIAA1549Q9HCM3 DYNAP-201ENST00000321600 2027 ntAPPRIS P3 TSL 2 BASIC2.53□□□□□ -2
KIAA1549Q9HCM3 HDX-206ENST00000506585 6158 ntTSL 2 BASIC2.53□□□□□ -2
KIAA1549Q9HCM3 MT-ND3-201ENST00000361227 346 ntAPPRIS P1 BASIC2.53□□□□□ -2
KIAA1549Q9HCM3 STATH-202ENST00000381060 534 ntTSL 1 (best) BASIC2.53□□□□□ -2
KIAA1549Q9HCM3 AL034374.1-201ENST00000406329 351 ntBASIC2.53□□□□□ -2
KIAA1549Q9HCM3 AL359195.1-201ENST00000416657 339 ntTSL 3 BASIC2.53□□□□□ -2
KIAA1549Q9HCM3 AL078581.1-201ENST00000419134 340 ntTSL 5 BASIC2.53□□□□□ -2
KIAA1549Q9HCM3 AL391832.1-201ENST00000423963 423 ntTSL 5 BASIC2.53□□□□□ -2
KIAA1549Q9HCM3 ZDHHC20P2-201ENST00000424108 429 ntBASIC2.53□□□□□ -2
KIAA1549Q9HCM3 AC007179.2-204ENST00000444001 765 ntTSL 3 BASIC2.53□□□□□ -2
KIAA1549Q9HCM3 MTUS2-AS2-203ENST00000452602 651 ntTSL 3 BASIC2.53□□□□□ -2
KIAA1549Q9HCM3 RN7SKP272-201ENST00000516988 232 ntBASIC2.53□□□□□ -2
KIAA1549Q9HCM3 OR5D17P-201ENST00000531492 978 ntBASIC2.53□□□□□ -2
KIAA1549Q9HCM3 AL133330.2-201ENST00000532760 776 ntTSL 2 BASIC2.53□□□□□ -2
KIAA1549Q9HCM3 AC008114.1-201ENST00000544122 427 ntTSL 2 BASIC2.53□□□□□ -2
KIAA1549Q9HCM3 OR4H12P-201ENST00000556269 907 ntBASIC2.53□□□□□ -2
KIAA1549Q9HCM3 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC2.53□□□□□ -2
KIAA1549Q9HCM3 FOPNL-205ENST00000573429 646 ntTSL 3 BASIC2.53□□□□□ -2
KIAA1549Q9HCM3 ELOCP29-201ENST00000588193 334 ntBASIC2.53□□□□□ -2
KIAA1549Q9HCM3 AC091488.1-201ENST00000604239 660 ntBASIC2.53□□□□□ -2
KIAA1549Q9HCM3 OR2AS2P-201ENST00000606902 342 ntBASIC2.53□□□□□ -2
KIAA1549Q9HCM3 AL162591.3-201ENST00000607963 681 ntTSL 3 BASIC2.53□□□□□ -2
KIAA1549Q9HCM3 RAD21-210ENST00000523986 2506 ntTSL 2 BASIC2.53□□□□□ -2.01
KIAA1549Q9HCM3 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC2.53□□□□□ -2.01
KIAA1549Q9HCM3 FAM107B-204ENST00000378465 1052 ntAPPRIS P1 TSL 2 BASIC2.52□□□□□ -2.01
KIAA1549Q9HCM3 RNU6-356P-201ENST00000384140 107 ntBASIC2.52□□□□□ -2.01
KIAA1549Q9HCM3 RNU6-167P-201ENST00000384292 106 ntBASIC2.52□□□□□ -2.01
KIAA1549Q9HCM3 RPA3-203ENST00000401447 414 ntTSL 3 BASIC2.52□□□□□ -2.01
KIAA1549Q9HCM3 AL356057.1-202ENST00000402263 756 ntBASIC2.52□□□□□ -2.01
KIAA1549Q9HCM3 RPL31P52-201ENST00000407532 367 ntBASIC2.52□□□□□ -2.01
KIAA1549Q9HCM3 AC006150.1-201ENST00000412014 263 ntTSL 5 BASIC2.52□□□□□ -2.01
KIAA1549Q9HCM3 SMC4P1-201ENST00000414479 527 ntBASIC2.52□□□□□ -2.01
KIAA1549Q9HCM3 AL356806.1-201ENST00000422524 916 ntBASIC2.52□□□□□ -2.01
KIAA1549Q9HCM3 ZNF33CP-201ENST00000432492 2030 ntBASIC2.52□□□□□ -2.01
KIAA1549Q9HCM3 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC2.52□□□□□ -2.01
KIAA1549Q9HCM3 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC2.52□□□□□ -2.01
KIAA1549Q9HCM3 AC078883.3-201ENST00000458314 512 ntTSL 2 BASIC2.52□□□□□ -2.01
KIAA1549Q9HCM3 AC023050.1-201ENST00000498198 304 ntBASIC2.52□□□□□ -2.01
KIAA1549Q9HCM3 TRAV37-201ENST00000553906 342 ntBASIC2.52□□□□□ -2.01
KIAA1549Q9HCM3 EGLN3-AS1-201ENST00000555922 308 ntTSL 3 BASIC2.52□□□□□ -2.01
KIAA1549Q9HCM3 AC106745.1-201ENST00000566798 464 ntTSL 2 BASIC2.52□□□□□ -2.01
KIAA1549Q9HCM3 AC012186.2-201ENST00000569353 321 ntTSL 3 BASIC2.52□□□□□ -2.01
KIAA1549Q9HCM3 LINC01482-203ENST00000589610 468 ntTSL 3 BASIC2.52□□□□□ -2.01
KIAA1549Q9HCM3 AL355816.1-201ENST00000607951 118 ntBASIC2.52□□□□□ -2.01
KIAA1549Q9HCM3 AC004832.5-201ENST00000608677 401 ntBASIC2.52□□□□□ -2.01
KIAA1549Q9HCM3 AC123768.3-201ENST00000613733 523 ntTSL 3 BASIC2.52□□□□□ -2.01
KIAA1549Q9HCM3 AC092326.2-201ENST00000624772 1561 ntBASIC2.52□□□□□ -2.01
KIAA1549Q9HCM3 AC008505.1-205ENST00000637847 703 ntTSL 5 BASIC2.52□□□□□ -2.01
KIAA1549Q9HCM3 METTL8-218ENST00000638989 876 ntTSL 5 BASIC2.52□□□□□ -2.01
KIAA1549Q9HCM3 METTL8-219ENST00000640734 726 ntTSL 2 BASIC2.52□□□□□ -2.01
KIAA1549Q9HCM3 SLC16A7-201ENST00000261187 11777 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
KIAA1549Q9HCM3 MAPK10-373ENST00000641983 6772 ntBASIC2.52□□□□□ -2.01
KIAA1549Q9HCM3 SGMS2-201ENST00000359079 1887 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
KIAA1549Q9HCM3 FAM208A-202ENST00000431842 7119 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
KIAA1549Q9HCM3 RABGAP1L-203ENST00000347255 1744 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
KIAA1549Q9HCM3 EVI5-201ENST00000370331 7403 ntAPPRIS P3 TSL 1 (best) BASIC2.52□□□□□ -2.01
KIAA1549Q9HCM3 AL136360.1-201ENST00000503377 1900 ntBASIC2.52□□□□□ -2.01
KIAA1549Q9HCM3 RNU6-673P-201ENST00000365084 104 ntBASIC2.52□□□□□ -2.01
KIAA1549Q9HCM3 U3.15-201ENST00000365398 212 ntBASIC2.52□□□□□ -2.01
KIAA1549Q9HCM3 CCNB2P1-201ENST00000399411 1150 ntBASIC2.52□□□□□ -2.01
KIAA1549Q9HCM3 AL022329.2-201ENST00000413494 660 ntTSL 5 BASIC2.52□□□□□ -2.01
KIAA1549Q9HCM3 AL451164.2-201ENST00000445932 597 ntTSL 2 BASIC2.52□□□□□ -2.01
KIAA1549Q9HCM3 SNRPG-206ENST00000454893 527 ntTSL 3 BASIC2.52□□□□□ -2.01
KIAA1549Q9HCM3 AL138737.1-201ENST00000456896 1252 ntTSL 5 BASIC2.52□□□□□ -2.01
KIAA1549Q9HCM3 SNORD109B-201ENST00000458961 67 ntBASIC2.52□□□□□ -2.01
KIAA1549Q9HCM3 SNORD109A-201ENST00000459128 67 ntBASIC2.52□□□□□ -2.01
KIAA1549Q9HCM3 RPL21P41-201ENST00000459863 264 ntBASIC2.52□□□□□ -2.01
KIAA1549Q9HCM3 AC126121.1-201ENST00000482313 553 ntBASIC2.52□□□□□ -2.01
KIAA1549Q9HCM3 AP001086.1-201ENST00000494882 321 ntBASIC2.52□□□□□ -2.01
KIAA1549Q9HCM3 FAM60DP-201ENST00000524174 632 ntBASIC2.52□□□□□ -2.01
KIAA1549Q9HCM3 MTND5P21-201ENST00000531961 522 ntBASIC2.52□□□□□ -2.01
KIAA1549Q9HCM3 LINC02399-201ENST00000547094 400 ntTSL 2 BASIC2.52□□□□□ -2.01
KIAA1549Q9HCM3 MIR4458-201ENST00000578872 75 ntBASIC2.52□□□□□ -2.01
KIAA1549Q9HCM3 AC067852.4-201ENST00000590314 478 ntBASIC2.52□□□□□ -2.01
KIAA1549Q9HCM3 C2orf27A-204ENST00000623058 969 ntBASIC2.52□□□□□ -2.01
KIAA1549Q9HCM3 AC005858.4-201ENST00000623191 700 ntBASIC2.52□□□□□ -2.01
KIAA1549Q9HCM3 AC244517.5-202ENST00000623741 500 ntTSL 3 BASIC2.52□□□□□ -2.01
KIAA1549Q9HCM3 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC2.52□□□□□ -2.01
KIAA1549Q9HCM3 AC008505.1-204ENST00000637363 2714 ntTSL 5 BASIC2.52□□□□□ -2.01
KIAA1549Q9HCM3 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC2.52□□□□□ -2.01
KIAA1549Q9HCM3 MTCO1P8-201ENST00000416914 1523 ntBASIC2.52□□□□□ -2.01
KIAA1549Q9HCM3 MTND5P27-201ENST00000428871 1720 ntBASIC2.51□□□□□ -2.01
KIAA1549Q9HCM3 USH2A-202ENST00000366942 6320 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
KIAA1549Q9HCM3 RFESD-202ENST00000380005 2587 ntTSL 2 BASIC2.51□□□□□ -2.01
KIAA1549Q9HCM3 MGAT4C-211ENST00000621808 2582 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
KIAA1549Q9HCM3 FTLP6-201ENST00000355274 422 ntBASIC2.51□□□□□ -2.01
KIAA1549Q9HCM3 SNORA31-201ENST00000362607 130 ntBASIC2.51□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 87.7 ms