Protein–RNA interactions for Protein: Q9C0C7

AMBRA1, Activating molecule in BECN1-regulated autophagy protein 1, humanhuman

Predictions only

Length 1,298 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1Q9C0C7 AC083900.1-201ENST00000421964 469 ntTSL 2 BASIC4.45□□□□□ -1.7
AMBRA1Q9C0C7 OR2AM1P-201ENST00000422137 422 ntBASIC4.45□□□□□ -1.7
AMBRA1Q9C0C7 AL135908.1-201ENST00000431394 446 ntTSL 3 BASIC4.45□□□□□ -1.7
AMBRA1Q9C0C7 CASP12-204ENST00000433738 709 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
AMBRA1Q9C0C7 PRPF38AP2-201ENST00000438179 851 ntBASIC4.45□□□□□ -1.7
AMBRA1Q9C0C7 AL450263.2-201ENST00000439400 589 ntBASIC4.45□□□□□ -1.7
AMBRA1Q9C0C7 LINC00113-203ENST00000442550 572 ntTSL 3 BASIC4.45□□□□□ -1.7
AMBRA1Q9C0C7 LINC00704-202ENST00000443994 418 ntTSL 2 BASIC4.45□□□□□ -1.7
AMBRA1Q9C0C7 AC092324.1-201ENST00000468671 324 ntBASIC4.45□□□□□ -1.7
AMBRA1Q9C0C7 AC087879.1-201ENST00000474343 374 ntBASIC4.45□□□□□ -1.7
AMBRA1Q9C0C7 FTH1P24-201ENST00000503502 462 ntBASIC4.45□□□□□ -1.7
AMBRA1Q9C0C7 AC082650.1-201ENST00000503542 575 ntTSL 4 BASIC4.45□□□□□ -1.7
AMBRA1Q9C0C7 AC093909.2-201ENST00000505178 437 ntTSL 3 BASIC4.45□□□□□ -1.7
AMBRA1Q9C0C7 AC016687.2-203ENST00000506650 578 ntTSL 3 BASIC4.45□□□□□ -1.7
AMBRA1Q9C0C7 AC107208.1-201ENST00000508265 519 ntTSL 4 BASIC4.45□□□□□ -1.7
AMBRA1Q9C0C7 STMN1P2-201ENST00000508435 439 ntBASIC4.45□□□□□ -1.7
AMBRA1Q9C0C7 RNU6-1003P-201ENST00000517099 105 ntBASIC4.45□□□□□ -1.7
AMBRA1Q9C0C7 AC024958.1-201ENST00000519364 902 ntTSL 5 BASIC4.45□□□□□ -1.7
AMBRA1Q9C0C7 AP003467.2-201ENST00000520175 319 ntBASIC4.45□□□□□ -1.7
AMBRA1Q9C0C7 AC055878.1-201ENST00000531858 281 ntTSL 3 BASIC4.45□□□□□ -1.7
AMBRA1Q9C0C7 AC093249.4-201ENST00000564755 259 ntBASIC4.45□□□□□ -1.7
AMBRA1Q9C0C7 AC068135.2-201ENST00000569293 1028 ntBASIC4.45□□□□□ -1.7
AMBRA1Q9C0C7 AC007599.2-201ENST00000573040 493 ntTSL 5 BASIC4.45□□□□□ -1.7
AMBRA1Q9C0C7 SNORA59B-202ENST00000578183 701 ntBASIC4.45□□□□□ -1.7
AMBRA1Q9C0C7 MIR3682-201ENST00000581338 84 ntBASIC4.45□□□□□ -1.7
AMBRA1Q9C0C7 MIR548S-201ENST00000581352 82 ntBASIC4.45□□□□□ -1.7
AMBRA1Q9C0C7 AC110743.1-201ENST00000584870 478 ntBASIC4.45□□□□□ -1.7
AMBRA1Q9C0C7 AC011487.3-201ENST00000593607 453 ntBASIC4.45□□□□□ -1.7
AMBRA1Q9C0C7 AL157786.1-204ENST00000594870 506 ntTSL 3 BASIC4.45□□□□□ -1.7
AMBRA1Q9C0C7 BNIP3P30-201ENST00000601184 574 ntBASIC4.45□□□□□ -1.7
AMBRA1Q9C0C7 AL020997.2-201ENST00000602607 184 ntBASIC4.45□□□□□ -1.7
AMBRA1Q9C0C7 AC091965.4-201ENST00000607691 587 ntBASIC4.45□□□□□ -1.7
AMBRA1Q9C0C7 AL592295.2-201ENST00000612578 206 ntBASIC4.45□□□□□ -1.7
AMBRA1Q9C0C7 C8orf59-208ENST00000612809 475 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
AMBRA1Q9C0C7 UBE2Q2P2-203ENST00000613592 761 ntBASIC4.45□□□□□ -1.7
AMBRA1Q9C0C7 5_8S_rRNA.1-201ENST00000614365 152 ntBASIC4.45□□□□□ -1.7
AMBRA1Q9C0C7 AC136475.10-201ENST00000620253 385 ntBASIC4.45□□□□□ -1.7
AMBRA1Q9C0C7 AL356321.1-201ENST00000621360 228 ntBASIC4.45□□□□□ -1.7
AMBRA1Q9C0C7 RNU6-156P-201ENST00000621869 107 ntBASIC4.45□□□□□ -1.7
AMBRA1Q9C0C7 BTG3-AS1-201ENST00000626994 552 ntTSL 4 BASIC4.45□□□□□ -1.7
AMBRA1Q9C0C7 NANOGNB-202ENST00000640040 824 ntAPPRIS ALT2 TSL 5 BASIC4.45□□□□□ -1.7
AMBRA1Q9C0C7 KC6-201ENST00000592302 1713 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
AMBRA1Q9C0C7 NKIRAS1-209ENST00000614374 1612 ntAPPRIS P2 TSL 1 (best) BASIC4.45□□□□□ -1.7
AMBRA1Q9C0C7 GABRA2-202ENST00000381620 2525 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
AMBRA1Q9C0C7 FAM197Y3-202ENST00000427622 2325 ntTSL 5 BASIC4.45□□□□□ -1.7
AMBRA1Q9C0C7 FAM197Y7-202ENST00000433321 2325 ntTSL 2 BASIC4.45□□□□□ -1.7
AMBRA1Q9C0C7 Z95327.2-201ENST00000414579 1873 ntBASIC4.45□□□□□ -1.7
AMBRA1Q9C0C7 DICER1-212ENST00000541352 5621 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
AMBRA1Q9C0C7 PTPRD-203ENST00000381196 9911 ntAPPRIS P1 TSL 5 BASIC4.45□□□□□ -1.7
AMBRA1Q9C0C7 AC234781.1-202ENST00000412436 1329 ntTSL 5 BASIC4.45□□□□□ -1.7
AMBRA1Q9C0C7 RBMS3-205ENST00000434693 8540 ntTSL 5 BASIC4.44□□□□□ -1.7
AMBRA1Q9C0C7 LTA4H-202ENST00000413268 1908 ntTSL 2 BASIC4.44□□□□□ -1.7
AMBRA1Q9C0C7 MTND5P28-201ENST00000438005 1594 ntBASIC4.44□□□□□ -1.7
AMBRA1Q9C0C7 MYB-226ENST00000528774 2277 ntAPPRIS ALT1 TSL 1 (best) BASIC4.44□□□□□ -1.7
AMBRA1Q9C0C7 GABRG2-217ENST00000639384 5360 ntTSL 5 BASIC4.44□□□□□ -1.7
AMBRA1Q9C0C7 IPO11-203ENST00000409534 1725 ntTSL 2 BASIC4.44□□□□□ -1.7
AMBRA1Q9C0C7 BTBD10P1-201ENST00000549824 1352 ntBASIC4.44□□□□□ -1.7
AMBRA1Q9C0C7 LINC00550-201ENST00000629293 3434 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
AMBRA1Q9C0C7 RNA5SP428-201ENST00000365129 132 ntBASIC4.44□□□□□ -1.7
AMBRA1Q9C0C7 SRY-201ENST00000383070 845 ntAPPRIS P1 BASIC4.44□□□□□ -1.7
AMBRA1Q9C0C7 GSTA9P-201ENST00000406231 611 ntBASIC4.44□□□□□ -1.7
AMBRA1Q9C0C7 PPP3R1-203ENST00000409752 851 ntTSL 3 BASIC4.44□□□□□ -1.7
AMBRA1Q9C0C7 LINC01423-201ENST00000414189 608 ntTSL 3 BASIC4.44□□□□□ -1.7
AMBRA1Q9C0C7 AL138826.1-202ENST00000415106 692 ntAPPRIS P1 TSL 2 BASIC4.44□□□□□ -1.7
AMBRA1Q9C0C7 BX295541.1-201ENST00000417774 250 ntBASIC4.44□□□□□ -1.7
AMBRA1Q9C0C7 NANOGP6-201ENST00000429190 847 ntBASIC4.44□□□□□ -1.7
AMBRA1Q9C0C7 USP9YP9-201ENST00000429406 715 ntBASIC4.44□□□□□ -1.7
AMBRA1Q9C0C7 RPEP2-201ENST00000432149 701 ntBASIC4.44□□□□□ -1.7
AMBRA1Q9C0C7 MTND4LP10-201ENST00000435146 291 ntBASIC4.44□□□□□ -1.7
AMBRA1Q9C0C7 AC009961.2-201ENST00000435771 251 ntBASIC4.44□□□□□ -1.7
AMBRA1Q9C0C7 LINC01307-201ENST00000439146 474 ntTSL 3 BASIC4.44□□□□□ -1.7
AMBRA1Q9C0C7 MTATP6P30-201ENST00000443540 664 ntBASIC4.44□□□□□ -1.7
AMBRA1Q9C0C7 KRTAP21-3-201ENST00000444335 253 ntAPPRIS P1 BASIC4.44□□□□□ -1.7
AMBRA1Q9C0C7 USP9YP34-201ENST00000453983 808 ntBASIC4.44□□□□□ -1.7
AMBRA1Q9C0C7 BX322784.1-201ENST00000455793 1077 ntBASIC4.44□□□□□ -1.7
AMBRA1Q9C0C7 AL353152.1-201ENST00000455973 470 ntTSL 5 BASIC4.44□□□□□ -1.7
AMBRA1Q9C0C7 AC004692.2-202ENST00000458680 478 ntTSL 3 BASIC4.44□□□□□ -1.7
AMBRA1Q9C0C7 APOOP2-201ENST00000461561 539 ntBASIC4.44□□□□□ -1.7
AMBRA1Q9C0C7 OR52A4P-201ENST00000472867 958 ntBASIC4.44□□□□□ -1.7
AMBRA1Q9C0C7 AC026316.2-201ENST00000473110 263 ntTSL 3 BASIC4.44□□□□□ -1.7
AMBRA1Q9C0C7 FCF1P3-201ENST00000496394 590 ntBASIC4.44□□□□□ -1.7
AMBRA1Q9C0C7 MRPS33P2-201ENST00000507850 322 ntBASIC4.44□□□□□ -1.7
AMBRA1Q9C0C7 AC087241.1-201ENST00000508615 429 ntTSL 5 BASIC4.44□□□□□ -1.7
AMBRA1Q9C0C7 AC026991.1-201ENST00000520815 463 ntTSL 3 BASIC4.44□□□□□ -1.7
AMBRA1Q9C0C7 AC022695.3-201ENST00000523385 478 ntTSL 3 BASIC4.44□□□□□ -1.7
AMBRA1Q9C0C7 AC008114.1-201ENST00000544122 427 ntTSL 2 BASIC4.44□□□□□ -1.7
AMBRA1Q9C0C7 AC009135.1-201ENST00000549303 776 ntTSL 2 BASIC4.44□□□□□ -1.7
AMBRA1Q9C0C7 AL163932.1-201ENST00000555776 542 ntTSL 4 BASIC4.44□□□□□ -1.7
AMBRA1Q9C0C7 BGLT3-201ENST00000564523 994 ntBASIC4.44□□□□□ -1.7
AMBRA1Q9C0C7 AC015912.2-201ENST00000571053 181 ntBASIC4.44□□□□□ -1.7
AMBRA1Q9C0C7 SLC25A36P1-201ENST00000590111 465 ntBASIC4.44□□□□□ -1.7
AMBRA1Q9C0C7 AC103792.1-201ENST00000603591 919 ntBASIC4.44□□□□□ -1.7
AMBRA1Q9C0C7 AC005191.1-201ENST00000603950 358 ntBASIC4.44□□□□□ -1.7
AMBRA1Q9C0C7 AL359999.1-201ENST00000604513 294 ntBASIC4.44□□□□□ -1.7
AMBRA1Q9C0C7 AC109471.3-201ENST00000625219 233 ntTSL 5 BASIC4.44□□□□□ -1.7
AMBRA1Q9C0C7 AL138828.1-201ENST00000626414 291 ntTSL 5 BASIC4.44□□□□□ -1.7
AMBRA1Q9C0C7 AC110994.2-201ENST00000635481 492 ntBASIC4.44□□□□□ -1.7
AMBRA1Q9C0C7 AC099654.13-201ENST00000639774 207 ntBASIC4.44□□□□□ -1.7
AMBRA1Q9C0C7 ZNF733P-201ENST00000331425 1506 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
AMBRA1Q9C0C7 BBX-203ENST00000402543 3980 ntTSL 5 BASIC4.44□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 124 ms